RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 LTAP01374 205 aa6.13□□□□□ -1.43
BRCA1-207ENST00000461798 ARMS2P0C7Q2 107 aa6.13□□□□□ -1.43
BRCA1-207ENST00000461798 SEC11BP0C7V7 166 aa6.13□□□□□ -1.43
BRCA1-207ENST00000461798 KRTAP10-1P60331 282 aa6.13□□□□□ -1.43
BRCA1-207ENST00000461798 ZNF345Q14585 488 aa6.13□□□□□ -1.43
BRCA1-207ENST00000461798 LGALSLQ3ZCW2 172 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-207ENST00000461798 OR10J3Q5JRS4 329 aa6.13□□□□□ -1.43
BRCA1-207ENST00000461798 FAM162BQ5T6X4 162 aa6.13□□□□□ -1.43
BRCA1-207ENST00000461798 A0A087WWC5 75 aa6.12□□□□□ -1.43
BRCA1-207ENST00000461798 UMAD1C9J7I0 102 aa6.12□□□□□ -1.43
BRCA1-207ENST00000461798 RHODO00212 210 aa6.12□□□□□ -1.43
BRCA1-207ENST00000461798 S100A9P06702 114 aaKnown RBP6.12□□□□□ -1.43
BRCA1-207ENST00000461798 GCSHP23434 173 aa6.12□□□□□ -1.43
BRCA1-207ENST00000461798 FUSP35637 526 aaKnown RBP eCLIP6.12□□□□□ -1.43
BRCA1-207ENST00000461798 UBE2G1P62253 170 aa6.12□□□□□ -1.43
BRCA1-207ENST00000461798 LAGE3Q14657 143 aa6.12□□□□□ -1.43
BRCA1-207ENST00000461798 SYT8Q8NBV8 401 aa6.12□□□□□ -1.43
BRCA1-207ENST00000461798 NTN5Q8WTR8 489 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-207ENST00000461798 SFRP2Q96HF1 295 aa6.12□□□□□ -1.43
BRCA1-207ENST00000461798 SAMD10Q9BYL1 202 aa6.12□□□□□ -1.43
BRCA1-207ENST00000461798 JPT2Q9H910 190 aa6.12□□□□□ -1.43
BRCA1-207ENST00000461798 Q9UF83 564 aa6.12□□□□□ -1.43
BRCA1-207ENST00000461798 A0A0D9SG52 128 aa6.11□□□□□ -1.43
BRCA1-207ENST00000461798 GAGE12JA6NER3 117 aa6.11□□□□□ -1.43
BRCA1-207ENST00000461798 SMLR1H3BR10 107 aa6.11□□□□□ -1.43
BRCA1-207ENST00000461798 H3BVH4 76 aa6.11□□□□□ -1.43
BRCA1-207ENST00000461798 GAGE1Q13065 139 aa6.11□□□□□ -1.43
BRCA1-207ENST00000461798 GAGE4Q13068 117 aa6.11□□□□□ -1.43
BRCA1-207ENST00000461798 GAGE5Q13069 117 aa6.11□□□□□ -1.43
BRCA1-207ENST00000461798 GAGE13Q4V321 117 aa6.11□□□□□ -1.43
BRCA1-207ENST00000461798 CST9LP1Q5W188 147 aa6.11□□□□□ -1.43
BRCA1-207ENST00000461798 C14orf178Q8N769 122 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-207ENST00000461798 OR11H4Q8NGC9 324 aa6.11□□□□□ -1.43
BRCA1-207ENST00000461798 MLST8Q9BVC4 326 aa6.11□□□□□ -1.43
BRCA1-207ENST00000461798 TM2D2Q9BX73 214 aa6.11□□□□□ -1.43
BRCA1-207ENST00000461798 MRPL18Q9H0U6 180 aaKnown RBP6.11□□□□□ -1.43
BRCA1-207ENST00000461798 PHLDA3Q9Y5J5 127 aa6.11□□□□□ -1.43
BRCA1-207ENST00000461798 GRIFINA4D1Z8 144 aa6.1□□□□□ -1.43
BRCA1-207ENST00000461798 EPM2AB3EWF7 344 aa6.1□□□□□ -1.43
BRCA1-207ENST00000461798 M0R036 132 aa6.1□□□□□ -1.43
BRCA1-207ENST00000461798 PSCAO43653 123 aa6.1□□□□□ -1.43
BRCA1-207ENST00000461798 PAGE4O60829 102 aa6.1□□□□□ -1.43
BRCA1-207ENST00000461798 IGHV3-30P01768 117 aa6.1□□□□□ -1.43
BRCA1-207ENST00000461798 IGHV3-33P01772 117 aa6.1□□□□□ -1.43
BRCA1-207ENST00000461798 CXCL1P09341 107 aa6.1□□□□□ -1.43
BRCA1-207ENST00000461798 IGHV3-30-3P0DP02 117 aa6.1□□□□□ -1.43
BRCA1-207ENST00000461798 IGHV3-30-5P0DP03 117 aa6.1□□□□□ -1.43
BRCA1-207ENST00000461798 TPT1P13693 172 aaKnown RBP6.1□□□□□ -1.43
BRCA1-207ENST00000461798 Q8N814 137 aa6.1□□□□□ -1.43
BRCA1-207ENST00000461798 SFT2D1Q8WV19 159 aa6.1□□□□□ -1.43
BRCA1-207ENST00000461798 TRAV8-3A0A0A6YYJ7 113 aa6.09□□□□□ -1.43
BRCA1-207ENST00000461798 TRBV10-1A0A0K0K1A3 114 aa6.09□□□□□ -1.43
BRCA1-207ENST00000461798 BCL2L11O43521 198 aa6.09□□□□□ -1.43
BRCA1-207ENST00000461798 AKR1C3P42330 323 aa6.09□□□□□ -1.43
BRCA1-207ENST00000461798 EIF5AP63241 154 aaKnown RBP6.09□□□□□ -1.43
BRCA1-207ENST00000461798 TOR2AQ5JU69 321 aa6.09□□□□□ -1.43
BRCA1-207ENST00000461798 ZFP82Q8N141 532 aa6.09□□□□□ -1.43
BRCA1-207ENST00000461798 FAM213BQ8TBF2 198 aa6.09□□□□□ -1.43
BRCA1-207ENST00000461798 KRTAP9-3Q9BYQ3 159 aa6.09□□□□□ -1.43
BRCA1-207ENST00000461798 Q9HAA7 133 aa6.09□□□□□ -1.43
BRCA1-207ENST00000461798 TMSB15BA0A087X1C1 80 aa6.08□□□□□ -1.44
BRCA1-207ENST00000461798 IGLV5-52A0A0A0MRZ9 124 aa6.08□□□□□ -1.44
BRCA1-207ENST00000461798 C1QBP02746 253 aa6.08□□□□□ -1.44
BRCA1-207ENST00000461798 BAGE2Q86Y30 109 aa6.08□□□□□ -1.44
BRCA1-207ENST00000461798 OR10G8Q8NGN5 311 aa6.08□□□□□ -1.44
BRCA1-207ENST00000461798 TMEM70Q9BUB7 260 aa6.08□□□□□ -1.44
BRCA1-207ENST00000461798 ZNF471Q9BX82 626 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-207ENST00000461798 COX11Q9Y6N1 276 aa6.08□□□□□ -1.44
BRCA1-207ENST00000461798 A0A087WWL8 130 aa6.07□□□□□ -1.44
BRCA1-207ENST00000461798 TRAV1-1A0A0B4J248 108 aa6.07□□□□□ -1.44
BRCA1-207ENST00000461798 KANTRA0A1W2PQU2 76 aa6.07□□□□□ -1.44
BRCA1-207ENST00000461798 M0R381 172 aa6.07□□□□□ -1.44
BRCA1-207ENST00000461798 SNAI2O43623 268 aa6.07□□□□□ -1.44
BRCA1-207ENST00000461798 UBE2D3P61077 147 aa6.07□□□□□ -1.44
BRCA1-207ENST00000461798 UBE2D2P62837 147 aa6.07□□□□□ -1.44
BRCA1-207ENST00000461798 FAM74A4Q5TZK3 123 aa6.07□□□□□ -1.44
BRCA1-207ENST00000461798 TMUB2Q71RG4 321 aa6.07□□□□□ -1.44
BRCA1-207ENST00000461798 DAZ4Q86SG3 579 aaKnown RBP6.07□□□□□ -1.44
BRCA1-207ENST00000461798 NIT1Q86X76 327 aa6.07□□□□□ -1.44
BRCA1-207ENST00000461798 CHCHD7Q9BUK0 85 aa6.07□□□□□ -1.44
BRCA1-207ENST00000461798 DAZ3Q9NR90 486 aaKnown RBP6.07□□□□□ -1.44
BRCA1-207ENST00000461798 FAT1Q14517 4588 aa6.07□□□□□ -1.44
BRCA1-207ENST00000461798 TRBV7-3A0A075B6L6 115 aa6.06□□□□□ -1.44
BRCA1-207ENST00000461798 PFDN1O60925 122 aa6.06□□□□□ -1.44
BRCA1-207ENST00000461798 OR5AL1P0C617 328 aa6.06□□□□□ -1.44
BRCA1-207ENST00000461798 RAB4BP61018 213 aa6.06□□□□□ -1.44
BRCA1-207ENST00000461798 RPL36AP83881 106 aaKnown RBP6.06□□□□□ -1.44
BRCA1-207ENST00000461798 WFDC2Q14508 124 aa6.06□□□□□ -1.44
BRCA1-207ENST00000461798 PRR27Q6MZM9 219 aa6.06□□□□□ -1.44
BRCA1-207ENST00000461798 FRZBQ92765 325 aa6.06□□□□□ -1.44
BRCA1-207ENST00000461798 RPL36ALQ969Q0 106 aaKnown RBP6.06□□□□□ -1.44
BRCA1-207ENST00000461798 C11orf52Q96A22 123 aa6.06□□□□□ -1.44
BRCA1-207ENST00000461798 A0A1B0GV50 99 aa6.05□□□□□ -1.44
BRCA1-207ENST00000461798 INAFM2P0DMQ5 153 aa6.05□□□□□ -1.44
BRCA1-207ENST00000461798 RAB5CP51148 216 aa6.05□□□□□ -1.44
BRCA1-207ENST00000461798 CCL20P78556 96 aa6.05□□□□□ -1.44
BRCA1-207ENST00000461798 RPL19P84098 196 aaKnown RBP6.05□□□□□ -1.44
BRCA1-207ENST00000461798 ELOBQ15370 118 aa6.05□□□□□ -1.44
BRCA1-207ENST00000461798 Q5VSD8 79 aa6.05□□□□□ -1.44
BRCA1-207ENST00000461798 ATRAIDQ6UW56 229 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms