RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 VPS13BQ7Z7G8 4022 aa5.81□□□□□ -1.48
HDAC9-220ENST00000461409 HERC1Q15751 4861 aa5.8□□□□□ -1.48
HDAC9-220ENST00000461409 TRAV8-3A0A0A6YYJ7 113 aa5.8□□□□□ -1.48
HDAC9-220ENST00000461409 CTXND1A0A1B0GTU2 59 aa5.8□□□□□ -1.48
HDAC9-220ENST00000461409 KRTAP23-1A1A580 65 aa5.8□□□□□ -1.48
HDAC9-220ENST00000461409 RHODO00212 210 aa5.8□□□□□ -1.48
HDAC9-220ENST00000461409 PEX7O00628 323 aa5.8□□□□□ -1.48
HDAC9-220ENST00000461409 GIPP09681 153 aaPredicted RBP5.8□□□□□ -1.48
HDAC9-220ENST00000461409 FGF8P55075 233 aaPredicted RBP5.8□□□□□ -1.48
HDAC9-220ENST00000461409 LGALSLQ3ZCW2 172 aaPredicted RBP5.8□□□□□ -1.48
HDAC9-220ENST00000461409 TOR2AQ5JU69 321 aa5.8□□□□□ -1.48
HDAC9-220ENST00000461409 HIST1H2BAQ96A08 127 aa5.8□□□□□ -1.48
HDAC9-220ENST00000461409 PARLQ9H300 379 aa5.8□□□□□ -1.48
HDAC9-220ENST00000461409 BATF3Q9NR55 127 aa5.8□□□□□ -1.48
HDAC9-220ENST00000461409 IL36BQ9NZH7 164 aa5.8□□□□□ -1.48
HDAC9-220ENST00000461409 ARL2-SNX15V9GYD0 113 aa5.8□□□□□ -1.48
HDAC9-220ENST00000461409 FXYD6-FXYD2A0A087WZ82 144 aa5.79□□□□□ -1.48
HDAC9-220ENST00000461409 TRAV34A0A0B4J273 112 aa5.79□□□□□ -1.48
HDAC9-220ENST00000461409 IGKV3D-20A0A0C4DH25 116 aa5.79□□□□□ -1.48
HDAC9-220ENST00000461409 B4DEV8 164 aa5.79□□□□□ -1.48
HDAC9-220ENST00000461409 C1QBP02746 253 aa5.79□□□□□ -1.48
HDAC9-220ENST00000461409 SEC11BP0C7V7 166 aa5.79□□□□□ -1.48
HDAC9-220ENST00000461409 LINC00694P0DN24 101 aa5.79□□□□□ -1.48
HDAC9-220ENST00000461409 GAGE13Q4V321 117 aa5.79□□□□□ -1.48
HDAC9-220ENST00000461409 AKR1C8PQ5T2L2 129 aa5.79□□□□□ -1.48
HDAC9-220ENST00000461409 RPL7L1Q6DKI1 246 aaKnown RBP5.79□□□□□ -1.48
HDAC9-220ENST00000461409 Q86TA4 180 aa5.79□□□□□ -1.48
HDAC9-220ENST00000461409 LINC00479Q96M42 142 aa5.79□□□□□ -1.48
HDAC9-220ENST00000461409 TCEAL7Q9BRU2 100 aa5.79□□□□□ -1.48
HDAC9-220ENST00000461409 ZFP30Q9Y2G7 519 aa5.79□□□□□ -1.48
HDAC9-220ENST00000461409 COX11Q9Y6N1 276 aa5.79□□□□□ -1.48
HDAC9-220ENST00000461409 GAGE12JA6NER3 117 aa5.78□□□□□ -1.48
HDAC9-220ENST00000461409 H3BVH4 76 aa5.78□□□□□ -1.48
HDAC9-220ENST00000461409 SMR3BP02814 79 aaPredicted RBP5.78□□□□□ -1.48
HDAC9-220ENST00000461409 UBE2G2P60604 165 aa5.78□□□□□ -1.48
HDAC9-220ENST00000461409 GAGE1Q13065 139 aa5.78□□□□□ -1.48
HDAC9-220ENST00000461409 GAGE4Q13068 117 aa5.78□□□□□ -1.48
HDAC9-220ENST00000461409 GAGE5Q13069 117 aa5.78□□□□□ -1.48
HDAC9-220ENST00000461409 FAM162BQ5T6X4 162 aa5.78□□□□□ -1.48
HDAC9-220ENST00000461409 OR11H4Q8NGC9 324 aa5.78□□□□□ -1.48
HDAC9-220ENST00000461409 OR2T35Q8NGX2 323 aa5.78□□□□□ -1.48
HDAC9-220ENST00000461409 RMI2Q96E14 147 aa5.78□□□□□ -1.48
HDAC9-220ENST00000461409 URGCP-MRPS24S4R325 110 aa5.78□□□□□ -1.48
HDAC9-220ENST00000461409 MYCBP2O75592 4640 aa5.78□□□□□ -1.48
HDAC9-220ENST00000461409 FAT1Q14517 4588 aa5.77□□□□□ -1.49
HDAC9-220ENST00000461409 RNF222A6NCQ9 220 aa5.77□□□□□ -1.49
HDAC9-220ENST00000461409 FAM74A7A6NL05 159 aa5.77□□□□□ -1.49
HDAC9-220ENST00000461409 KRBOX1C9JBD0 128 aa5.77□□□□□ -1.49
HDAC9-220ENST00000461409 HAMPP81172 84 aa5.77□□□□□ -1.49
HDAC9-220ENST00000461409 ZNF726P1Q15940 193 aa5.77□□□□□ -1.49
HDAC9-220ENST00000461409 Q5BKY6 102 aa5.77□□□□□ -1.49
HDAC9-220ENST00000461409 DNLZQ5SXM8 178 aa5.77□□□□□ -1.49
HDAC9-220ENST00000461409 UFSP1Q6NVU6 142 aa5.77□□□□□ -1.49
HDAC9-220ENST00000461409 COX8CQ7Z4L0 72 aa5.77□□□□□ -1.49
HDAC9-220ENST00000461409 FMC1Q96HJ9 113 aa5.77□□□□□ -1.49
HDAC9-220ENST00000461409 PHLDA3Q9Y5J5 127 aa5.77□□□□□ -1.49
HDAC9-220ENST00000461409 MAP1LC3B2A6NCE7 125 aa5.76□□□□□ -1.49
HDAC9-220ENST00000461409 M0R036 132 aa5.76□□□□□ -1.49
HDAC9-220ENST00000461409 SH2D1AO60880 128 aa5.76□□□□□ -1.49
HDAC9-220ENST00000461409 ARMS2P0C7Q2 107 aa5.76□□□□□ -1.49
HDAC9-220ENST00000461409 TPT1P13693 172 aaKnown RBP5.76□□□□□ -1.49
HDAC9-220ENST00000461409 FHITP49789 147 aa5.76□□□□□ -1.49
HDAC9-220ENST00000461409 UBE2G1P62253 170 aa5.76□□□□□ -1.49
HDAC9-220ENST00000461409 FAM74A4Q5TZK3 123 aa5.76□□□□□ -1.49
HDAC9-220ENST00000461409 KCNIP4Q6PIL6 250 aa5.76□□□□□ -1.49
HDAC9-220ENST00000461409 DAZ4Q86SG3 579 aaKnown RBP5.76□□□□□ -1.49
HDAC9-220ENST00000461409 ZFP82Q8N141 532 aa5.76□□□□□ -1.49
HDAC9-220ENST00000461409 C14orf178Q8N769 122 aaPredicted RBP5.76□□□□□ -1.49
HDAC9-220ENST00000461409 STOML3Q8TAV4 291 aa5.76□□□□□ -1.49
HDAC9-220ENST00000461409 ZC2HC1AQ96GY0 325 aa5.76□□□□□ -1.49
HDAC9-220ENST00000461409 SAMD10Q9BYL1 202 aa5.76□□□□□ -1.49
HDAC9-220ENST00000461409 MAP1LC3BQ9GZQ8 125 aa5.76□□□□□ -1.49
HDAC9-220ENST00000461409 DAZ3Q9NR90 486 aaKnown RBP5.76□□□□□ -1.49
HDAC9-220ENST00000461409 FLG2Q5D862 2391 aaPredicted RBP5.75□□□□□ -1.49
HDAC9-220ENST00000461409 A0A087WX48 190 aa5.75□□□□□ -1.49
HDAC9-220ENST00000461409 TRBV10-1A0A0K0K1A3 114 aa5.75□□□□□ -1.49
HDAC9-220ENST00000461409 TRBV6-1A0A0K0K1D8 114 aa5.75□□□□□ -1.49
HDAC9-220ENST00000461409 M0R381 172 aa5.75□□□□□ -1.49
HDAC9-220ENST00000461409 ELOBQ15370 118 aa5.75□□□□□ -1.49
HDAC9-220ENST00000461409 C21orf62-AS1Q17RA5 79 aa5.75□□□□□ -1.49
HDAC9-220ENST00000461409 CST9LP1Q5W188 147 aa5.75□□□□□ -1.49
HDAC9-220ENST00000461409 Q6ZSA8 131 aa5.75□□□□□ -1.49
HDAC9-220ENST00000461409 SFRP2Q96HF1 295 aa5.75□□□□□ -1.49
HDAC9-220ENST00000461409 CHCHD7Q9BUK0 85 aa5.75□□□□□ -1.49
HDAC9-220ENST00000461409 JPT2Q9H910 190 aa5.75□□□□□ -1.49
HDAC9-220ENST00000461409 A0A087WWL8 130 aa5.74□□□□□ -1.49
HDAC9-220ENST00000461409 GRIFINA4D1Z8 144 aa5.74□□□□□ -1.49
HDAC9-220ENST00000461409 LECT2O14960 151 aa5.74□□□□□ -1.49
HDAC9-220ENST00000461409 LTAP01374 205 aa5.74□□□□□ -1.49
HDAC9-220ENST00000461409 S100A9P06702 114 aaKnown RBP5.74□□□□□ -1.49
HDAC9-220ENST00000461409 CRIP1P50238 77 aa5.74□□□□□ -1.49
HDAC9-220ENST00000461409 RPL36AP83881 106 aaKnown RBP5.74□□□□□ -1.49
HDAC9-220ENST00000461409 WFDC2Q14508 124 aa5.74□□□□□ -1.49
HDAC9-220ENST00000461409 ZNF674Q2M3X9 581 aa5.74□□□□□ -1.49
HDAC9-220ENST00000461409 NIT1Q86X76 327 aa5.74□□□□□ -1.49
HDAC9-220ENST00000461409 Q8N976 141 aa5.74□□□□□ -1.49
HDAC9-220ENST00000461409 RPL36ALQ969Q0 106 aaKnown RBP5.74□□□□□ -1.49
HDAC9-220ENST00000461409 FAM30AQ9NZY2 134 aa5.74□□□□□ -1.49
HDAC9-220ENST00000461409 Q9UF83 564 aa5.74□□□□□ -1.49
HDAC9-220ENST00000461409 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms