RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 SMPXQ9UHP9 88 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 UFC1Q9Y3C8 167 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 TANC2Q9HCD6 1990 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 DSCAML1Q8TD84 2053 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 DOCK10Q96BY6 2186 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 IGKV2-28A0A075B6P5 120 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 IGHV3OR16-8A0A075B7F1 116 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 A0A0B4J2C4 111 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 A0A1B0GX78 115 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 A8MUN3 132 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 C10orf142B7Z368 130 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 TRAPPC2LH3BP13 241 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 M0R2Z0 102 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 LST1O00453 97 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 LECT2O14960 151 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 SLC25A20O43772 301 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 IGKV2D-28P01615 120 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 IGLC1P0CG04 106 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 GCHFRP30047 84 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 G6PCP35575 357 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 EDDM3BP56851 147 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 TAS2R45P59539 299 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 UBE2G1P62253 170 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 GNG3P63215 75 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 MOBPQ13875 183 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 FXYD3Q14802 87 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 MRPL54Q6P161 138 aaKnown RBP1.74□□□□□ -2.13
HPS3-203ENST00000460822 SMIM20Q8N5G0 67 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 SLC25A40Q8TBP6 338 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 CT55Q8WUE5 264 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 ST20Q9HBF5 79 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 PCNX2A6NKB5 2137 aa1.74□□□□□ -2.13
HPS3-203ENST00000460822 KNTC1P50748 2209 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 PRUNE2Q8WUY3 3088 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 TNCP24821 2201 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 TRAV40A0A0B4J280 105 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 A0A1B0GV72 72 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 SMIM27A0A1W2PRY6 76 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 TNFSF15O95150 251 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 COL8A2P25067 703 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 FKBP2P26885 142 aaKnown RBP1.73□□□□□ -2.13
HPS3-203ENST00000460822 CRYBB3P26998 211 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 GNG4P50150 75 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 TSPEAR-AS2P59090 65 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 LINC00315P59091 139 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 HSPE1P61604 102 aaKnown RBP1.73□□□□□ -2.13
HPS3-203ENST00000460822 RPL30P62888 115 aaKnown RBP1.73□□□□□ -2.13
HPS3-203ENST00000460822 HIST1H1AQ02539 215 aaPredicted RBP1.73□□□□□ -2.13
HPS3-203ENST00000460822 MRPL51Q4U2R6 128 aaKnown RBP1.73□□□□□ -2.13
HPS3-203ENST00000460822 SPINK9Q5DT21 86 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 IBA57Q5T440 356 aaKnown RBP1.73□□□□□ -2.13
HPS3-203ENST00000460822 MIC13Q5XKP0 118 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 RASL11AQ6T310 242 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 ZC2HC1AQ96GY0 325 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 MGST2Q99735 147 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 TMEM70Q9BUB7 260 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 OR2H1Q9GZK4 316 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 COMMD5Q9GZQ3 224 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 OSTCQ9NRP0 149 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 ARL2-SNX15V9GYD0 113 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 CELSR3Q9NYQ7 3312 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 DNAJC13O75165 2243 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 KIAA0100Q14667 2235 aaKnown RBP1.73□□□□□ -2.13
HPS3-203ENST00000460822 PI4KAP42356 2102 aa1.73□□□□□ -2.13
HPS3-203ENST00000460822 SVILO95425 2214 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 A0A0J9YW62 118 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 C7orf71A4D174 169 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 C17orf98A8MV24 154 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 C5orf67F2Z3F1 127 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 K7EP34 96 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 IGHV3-30-3P0DP02 117 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 PCBD1P61457 104 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 CATR1Q13166 79 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 KPRPQ5T749 579 aaPredicted RBP1.72□□□□□ -2.13
HPS3-203ENST00000460822 GDF5OSQ5U4N7 250 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 SAMD13Q5VXD3 122 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 AMTNQ6UX39 209 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 C2orf91Q6ZV80 131 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 C3orf22Q8N5N4 141 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 DAND5Q8N907 189 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 C5orf17Q8NAS9 161 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 OR11H6Q8NGC7 330 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 OR13C6PQ8NH95 151 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 RNASE6Q93091 150 aaKnown RBP1.72□□□□□ -2.13
HPS3-203ENST00000460822 IGF2BP2-AS1Q96M15 143 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 CHCHD2Q9Y6H1 151 aaPredicted RBP1.72□□□□□ -2.13
HPS3-203ENST00000460822 HEATR1Q9H583 2144 aaKnown RBP1.72□□□□□ -2.13
HPS3-203ENST00000460822 NAV3Q8IVL0 2385 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 IGHV1-24A0A0C4DH33 117 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 GGTLC3B5MD39 225 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 H3BQ85 93 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 SYS1-DBNDD2H3BUS1 97 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 OR2H2O95918 312 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 SMIM17P0DL12 118 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 MGST1P10620 155 aaKnown RBP1.72□□□□□ -2.13
HPS3-203ENST00000460822 SCGB1A1P11684 91 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 DSCR4P56555 118 aaPredicted RBP1.72□□□□□ -2.13
HPS3-203ENST00000460822 SEC11AP67812 179 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 C12orf74Q32Q52 190 aa1.72□□□□□ -2.13
HPS3-203ENST00000460822 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms