RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 SFRP2Q96HF1 295 aa8.02□□□□□ -1.13
GPNMB-204ENST00000459927 ARL2-SNX15V9GYD0 113 aa8.02□□□□□ -1.13
GPNMB-204ENST00000459927 A0A087WX48 190 aa8.01□□□□□ -1.13
GPNMB-204ENST00000459927 GRIFINA4D1Z8 144 aa8.01□□□□□ -1.13
GPNMB-204ENST00000459927 RHODO00212 210 aa8.01□□□□□ -1.13
GPNMB-204ENST00000459927 IGLV2-8P01709 118 aa8.01□□□□□ -1.13
GPNMB-204ENST00000459927 Q0VG73 95 aa8.01□□□□□ -1.13
GPNMB-204ENST00000459927 CHCHD7Q9BUK0 85 aa8.01□□□□□ -1.13
GPNMB-204ENST00000459927 A0A087WWL8 130 aa8□□□□□ -1.13
GPNMB-204ENST00000459927 TMEM262E9PQX1 116 aa8□□□□□ -1.13
GPNMB-204ENST00000459927 H3BVH4 76 aa8□□□□□ -1.13
GPNMB-204ENST00000459927 IFNA7P01567 189 aa8□□□□□ -1.13
GPNMB-204ENST00000459927 FAM74A4Q5TZK3 123 aa8□□□□□ -1.13
GPNMB-204ENST00000459927 ENHOQ6UWT2 76 aa8□□□□□ -1.13
GPNMB-204ENST00000459927 COX8CQ7Z4L0 72 aa8□□□□□ -1.13
GPNMB-204ENST00000459927 OR11H4Q8NGC9 324 aa8□□□□□ -1.13
GPNMB-204ENST00000459927 AQP10Q96PS8 301 aa8□□□□□ -1.13
GPNMB-204ENST00000459927 TRBV7-3A0A075B6L6 115 aa7.99□□□□□ -1.13
GPNMB-204ENST00000459927 TRBV10-1A0A0K0K1A3 114 aa7.99□□□□□ -1.13
GPNMB-204ENST00000459927 M0R036 132 aa7.99□□□□□ -1.13
GPNMB-204ENST00000459927 DEFA1P59665 94 aa7.99□□□□□ -1.13
GPNMB-204ENST00000459927 DEFA3P59666 94 aa7.99□□□□□ -1.13
GPNMB-204ENST00000459927 UBE2D3P61077 147 aa7.99□□□□□ -1.13
GPNMB-204ENST00000459927 UBE2D2P62837 147 aa7.99□□□□□ -1.13
GPNMB-204ENST00000459927 KCNIP4Q6PIL6 250 aa7.99□□□□□ -1.13
GPNMB-204ENST00000459927 ZC2HC1AQ96GY0 325 aa7.99□□□□□ -1.13
GPNMB-204ENST00000459927 NKX6-2Q9C056 277 aaPredicted RBP7.99□□□□□ -1.13
GPNMB-204ENST00000459927 ZFP30Q9Y2G7 519 aa7.99□□□□□ -1.13
GPNMB-204ENST00000459927 PHLDA3Q9Y5J5 127 aa7.99□□□□□ -1.13
GPNMB-204ENST00000459927 RPL36AP83881 106 aaKnown RBP7.98□□□□□ -1.13
GPNMB-204ENST00000459927 ZNF726P1Q15940 193 aa7.98□□□□□ -1.13
GPNMB-204ENST00000459927 C14orf177Q52M58 125 aa7.98□□□□□ -1.13
GPNMB-204ENST00000459927 Q5BKY6 102 aa7.98□□□□□ -1.13
GPNMB-204ENST00000459927 RPL36ALQ969Q0 106 aaKnown RBP7.98□□□□□ -1.13
GPNMB-204ENST00000459927 HIST1H2BAQ96A08 127 aa7.98□□□□□ -1.13
GPNMB-204ENST00000459927 DAZAP1Q96EP5 407 aaKnown RBP7.98□□□□□ -1.13
GPNMB-204ENST00000459927 PLA2G2DQ9UNK4 145 aa7.98□□□□□ -1.13
GPNMB-204ENST00000459927 TRBV6-8A0A0A6YYG3 113 aa7.97□□□□□ -1.13
GPNMB-204ENST00000459927 FAM74A7A6NL05 159 aa7.97□□□□□ -1.13
GPNMB-204ENST00000459927 M0R381 172 aa7.97□□□□□ -1.13
GPNMB-204ENST00000459927 PEX7O00628 323 aa7.97□□□□□ -1.13
GPNMB-204ENST00000459927 SH2D1AO60880 128 aa7.97□□□□□ -1.13
GPNMB-204ENST00000459927 TPT1P13693 172 aaKnown RBP7.97□□□□□ -1.13
GPNMB-204ENST00000459927 UBE2G2P60604 165 aa7.97□□□□□ -1.13
GPNMB-204ENST00000459927 ZNF674Q2M3X9 581 aa7.97□□□□□ -1.13
GPNMB-204ENST00000459927 FAM162BQ5T6X4 162 aa7.97□□□□□ -1.13
GPNMB-204ENST00000459927 DGAT2L7PQ6IED9 249 aa7.97□□□□□ -1.13
GPNMB-204ENST00000459927 C1orf43Q9BWL3 253 aa7.97□□□□□ -1.13
GPNMB-204ENST00000459927 TMSB15BA0A087X1C1 80 aa7.96□□□□□ -1.14
GPNMB-204ENST00000459927 CTXND1A0A1B0GTU2 59 aa7.96□□□□□ -1.14
GPNMB-204ENST00000459927 A6NHS1 94 aa7.96□□□□□ -1.14
GPNMB-204ENST00000459927 RPL37AP61513 92 aaKnown RBP7.96□□□□□ -1.14
GPNMB-204ENST00000459927 RPL7L1Q6DKI1 246 aaKnown RBP7.96□□□□□ -1.14
GPNMB-204ENST00000459927 Q86TA4 180 aa7.96□□□□□ -1.14
GPNMB-204ENST00000459927 OR10G8Q8NGN5 311 aa7.96□□□□□ -1.14
GPNMB-204ENST00000459927 ALG5Q9Y673 324 aa7.96□□□□□ -1.14
GPNMB-204ENST00000459927 PKHD1L1Q86WI1 4243 aa7.95□□□□□ -1.14
GPNMB-204ENST00000459927 PRSS1P07477 247 aa7.95□□□□□ -1.14
GPNMB-204ENST00000459927 HNRNPA3P51991 378 aaKnown RBP7.95□□□□□ -1.14
GPNMB-204ENST00000459927 RAB4BP61018 213 aa7.95□□□□□ -1.14
GPNMB-204ENST00000459927 LINC01559Q495D7 138 aa7.95□□□□□ -1.14
GPNMB-204ENST00000459927 ZFP82Q8N141 532 aa7.95□□□□□ -1.14
GPNMB-204ENST00000459927 C15orf54Q8N8G6 183 aa7.95□□□□□ -1.14
GPNMB-204ENST00000459927 C9orf163Q8N9P6 203 aa7.95□□□□□ -1.14
GPNMB-204ENST00000459927 TRBV6-1A0A0K0K1D8 114 aa7.94□□□□□ -1.14
GPNMB-204ENST00000459927 USP17L23D6RBM5 183 aa7.94□□□□□ -1.14
GPNMB-204ENST00000459927 PRR27Q6MZM9 219 aa7.94□□□□□ -1.14
GPNMB-204ENST00000459927 SDIM1Q6ZPB5 146 aa7.94□□□□□ -1.14
GPNMB-204ENST00000459927 NEXN-AS1Q8NBZ9 246 aa7.94□□□□□ -1.14
GPNMB-204ENST00000459927 FMC1Q96HJ9 113 aa7.94□□□□□ -1.14
GPNMB-204ENST00000459927 BORCS7-ASMTA0A0B4J1R7 106 aa7.93□□□□□ -1.14
GPNMB-204ENST00000459927 ANGP03950 147 aaKnown RBP7.93□□□□□ -1.14
GPNMB-204ENST00000459927 MPV17L2Q567V2 206 aa7.93□□□□□ -1.14
GPNMB-204ENST00000459927 INO80EQ8NBZ0 244 aaPredicted RBP7.93□□□□□ -1.14
GPNMB-204ENST00000459927 MED28Q9H204 178 aa7.93□□□□□ -1.14
GPNMB-204ENST00000459927 LTAP01374 205 aa7.92□□□□□ -1.14
GPNMB-204ENST00000459927 CRPP02741 224 aa7.92□□□□□ -1.14
GPNMB-204ENST00000459927 FHITP49789 147 aa7.92□□□□□ -1.14
GPNMB-204ENST00000459927 UBE2G1P62253 170 aa7.92□□□□□ -1.14
GPNMB-204ENST00000459927 MIAQ16674 131 aa7.92□□□□□ -1.14
GPNMB-204ENST00000459927 KRTAP26-1Q6PEX3 210 aa7.92□□□□□ -1.14
GPNMB-204ENST00000459927 NTM-AS1Q6ZSK4 140 aa7.92□□□□□ -1.14
GPNMB-204ENST00000459927 CHCHD5Q9BSY4 110 aa7.92□□□□□ -1.14
GPNMB-204ENST00000459927 PANO1I0J062 215 aa7.91□□□□□ -1.14
GPNMB-204ENST00000459927 PTTG1O95997 202 aa7.91□□□□□ -1.14
GPNMB-204ENST00000459927 SSBP4Q9BWG4 385 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-204ENST00000459927 PRR34Q9NV39 138 aa7.91□□□□□ -1.14
GPNMB-204ENST00000459927 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-204ENST00000459927 MT1HL1P0DM35 61 aa7.9□□□□□ -1.14
GPNMB-204ENST00000459927 PKIAP61925 76 aa7.9□□□□□ -1.14
GPNMB-204ENST00000459927 AKR1C8PQ5T2L2 129 aa7.9□□□□□ -1.14
GPNMB-204ENST00000459927 CST9LP1Q5W188 147 aa7.9□□□□□ -1.14
GPNMB-204ENST00000459927 LINC00269Q8N2A0 174 aa7.9□□□□□ -1.14
GPNMB-204ENST00000459927 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.9□□□□□ -1.14
GPNMB-204ENST00000459927 CLRN3Q8NCR9 226 aa7.9□□□□□ -1.14
GPNMB-204ENST00000459927 OR10AG1Q8NH19 301 aa7.9□□□□□ -1.14
GPNMB-204ENST00000459927 ZNF471Q9BX82 626 aaPredicted RBP7.9□□□□□ -1.14
GPNMB-204ENST00000459927 F5H697 171 aa7.89□□□□□ -1.15
GPNMB-204ENST00000459927 HLA-DQA1P01909 254 aa7.89□□□□□ -1.15
GPNMB-204ENST00000459927 GIPP09681 153 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms