RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 SPANXN1Q5VSR9 72 aa9.81□□□□□ -0.84
SMPD4-215ENST00000457039 LYZL1Q6UWQ5 148 aa9.81□□□□□ -0.84
SMPD4-215ENST00000457039 SLC25A29Q8N8R3 303 aa9.81□□□□□ -0.84
SMPD4-215ENST00000457039 CNFNQ9BYD5 112 aa9.81□□□□□ -0.84
SMPD4-215ENST00000457039 A0A087WWL8 130 aa9.8□□□□□ -0.84
SMPD4-215ENST00000457039 TRBV6-4A0A1B0GX49 114 aa9.8□□□□□ -0.84
SMPD4-215ENST00000457039 LINC00862A6NCI5 91 aa9.8□□□□□ -0.84
SMPD4-215ENST00000457039 A8MWL6 223 aa9.8□□□□□ -0.84
SMPD4-215ENST00000457039 RHODO00212 210 aa9.8□□□□□ -0.84
SMPD4-215ENST00000457039 FOXA3P55318 350 aaPredicted RBP9.8□□□□□ -0.84
SMPD4-215ENST00000457039 CACNG7P62955 275 aa9.8□□□□□ -0.84
SMPD4-215ENST00000457039 WDR73Q6P4I2 378 aa9.8□□□□□ -0.84
SMPD4-215ENST00000457039 Q6ZSN1 163 aa9.8□□□□□ -0.84
SMPD4-215ENST00000457039 TPPP3Q9BW30 176 aa9.8□□□□□ -0.84
SMPD4-215ENST00000457039 V9GYV3 84 aa9.8□□□□□ -0.84
SMPD4-215ENST00000457039 K7EQD1 137 aa9.79□□□□□ -0.84
SMPD4-215ENST00000457039 RNF212Q495C1 297 aa9.79□□□□□ -0.84
SMPD4-215ENST00000457039 COMMD7Q86VX2 200 aa9.79□□□□□ -0.84
SMPD4-215ENST00000457039 C15orf54Q8N8G6 183 aa9.79□□□□□ -0.84
SMPD4-215ENST00000457039 TSKUQ8WUA8 353 aa9.79□□□□□ -0.84
SMPD4-215ENST00000457039 MSRB1Q9NZV6 116 aa9.79□□□□□ -0.84
SMPD4-215ENST00000457039 ICOSQ9Y6W8 199 aa9.79□□□□□ -0.84
SMPD4-215ENST00000457039 KIF25-AS1Q9Y6Z4 181 aa9.79□□□□□ -0.84
SMPD4-215ENST00000457039 LOC100131303A0A0U1RQF7 123 aa9.78□□□□□ -0.84
SMPD4-215ENST00000457039 FAM231BA6NCW3 169 aa9.78□□□□□ -0.84
SMPD4-215ENST00000457039 GYPEP15421 78 aa9.78□□□□□ -0.84
SMPD4-215ENST00000457039 SSTP61278 116 aa9.78□□□□□ -0.84
SMPD4-215ENST00000457039 RHOHQ15669 191 aa9.78□□□□□ -0.84
SMPD4-215ENST00000457039 MRPL23Q16540 153 aaKnown RBP9.78□□□□□ -0.84
SMPD4-215ENST00000457039 FAM74A4Q5TZK3 123 aa9.78□□□□□ -0.84
SMPD4-215ENST00000457039 OR10G8Q8NGN5 311 aa9.78□□□□□ -0.84
SMPD4-215ENST00000457039 GFRA4Q9GZZ7 299 aa9.78□□□□□ -0.84
SMPD4-215ENST00000457039 TMEM218A2RU14 115 aa9.77□□□□□ -0.85
SMPD4-215ENST00000457039 ADCYAP1P18509 176 aa9.77□□□□□ -0.85
SMPD4-215ENST00000457039 NTF3P20783 257 aa9.77□□□□□ -0.85
SMPD4-215ENST00000457039 LINC00315P59091 139 aa9.77□□□□□ -0.85
SMPD4-215ENST00000457039 ESRGQ1W209 222 aa9.77□□□□□ -0.85
SMPD4-215ENST00000457039 C14orf178Q8N769 122 aaPredicted RBP9.77□□□□□ -0.85
SMPD4-215ENST00000457039 AP1S3Q96PC3 154 aa9.77□□□□□ -0.85
SMPD4-215ENST00000457039 PRADC1Q9BSG0 188 aa9.77□□□□□ -0.85
SMPD4-215ENST00000457039 LINC00588Q9Y4M8 146 aa9.77□□□□□ -0.85
SMPD4-215ENST00000457039 CCL18P55774 89 aa9.76□□□□□ -0.85
SMPD4-215ENST00000457039 PNRC1Q12796 327 aaPredicted RBP9.76□□□□□ -0.85
SMPD4-215ENST00000457039 Q9UF83 564 aa9.76□□□□□ -0.85
SMPD4-215ENST00000457039 HIGD1CA8MV81 97 aa9.75□□□□□ -0.85
SMPD4-215ENST00000457039 LINC00694P0DN24 101 aa9.75□□□□□ -0.85
SMPD4-215ENST00000457039 SRIP30626 198 aa9.75□□□□□ -0.85
SMPD4-215ENST00000457039 FAM3BP58499 235 aaPredicted RBP9.75□□□□□ -0.85
SMPD4-215ENST00000457039 RAB4BP61018 213 aa9.75□□□□□ -0.85
SMPD4-215ENST00000457039 NEGR1Q7Z3B1 354 aa9.75□□□□□ -0.85
SMPD4-215ENST00000457039 UBE2DNLQ8IWF7 75 aa9.75□□□□□ -0.85
SMPD4-215ENST00000457039 PGLYRP4Q96LB8 373 aa9.75□□□□□ -0.85
SMPD4-215ENST00000457039 DNAH2Q9P225 4427 aa9.75□□□□□ -0.85
SMPD4-215ENST00000457039 TRGC1P0CF51 173 aa9.74□□□□□ -0.85
SMPD4-215ENST00000457039 EVI2AP22794 236 aa9.74□□□□□ -0.85
SMPD4-215ENST00000457039 LYPD5Q6UWN5 251 aa9.74□□□□□ -0.85
SMPD4-215ENST00000457039 UPK3BQ9BT76 320 aa9.74□□□□□ -0.85
SMPD4-215ENST00000457039 TRBV10-1A0A0K0K1A3 114 aa9.73□□□□□ -0.85
SMPD4-215ENST00000457039 SMIM27A0A1W2PRY6 76 aa9.73□□□□□ -0.85
SMPD4-215ENST00000457039 SMIM17P0DL12 118 aa9.73□□□□□ -0.85
SMPD4-215ENST00000457039 TWIST1Q15672 202 aa9.73□□□□□ -0.85
SMPD4-215ENST00000457039 SH2D6Q7Z4S9 175 aa9.73□□□□□ -0.85
SMPD4-215ENST00000457039 NUP35Q8NFH5 326 aa9.73□□□□□ -0.85
SMPD4-215ENST00000457039 ZNRF2Q8NHG8 242 aa9.73□□□□□ -0.85
SMPD4-215ENST00000457039 SEC11CQ9BY50 192 aa9.73□□□□□ -0.85
SMPD4-215ENST00000457039 MRPS16Q9Y3D3 137 aaKnown RBP9.73□□□□□ -0.85
SMPD4-215ENST00000457039 DNAH10Q8IVF4 4471 aa9.73□□□□□ -0.85
SMPD4-215ENST00000457039 F8W036 122 aa9.72□□□□□ -0.85
SMPD4-215ENST00000457039 ZNF56Q15929 161 aa9.72□□□□□ -0.85
SMPD4-215ENST00000457039 DPH3P1Q9H4G8 78 aa9.72□□□□□ -0.85
SMPD4-215ENST00000457039 NAT8BQ9UHF3 227 aa9.72□□□□□ -0.85
SMPD4-215ENST00000457039 A0A1B0GUT8 65 aa9.71□□□□□ -0.86
SMPD4-215ENST00000457039 GAGE12JA6NER3 117 aa9.71□□□□□ -0.86
SMPD4-215ENST00000457039 TIRAPP58753 221 aa9.71□□□□□ -0.86
SMPD4-215ENST00000457039 GAGE1Q13065 139 aa9.71□□□□□ -0.86
SMPD4-215ENST00000457039 GAGE4Q13068 117 aa9.71□□□□□ -0.86
SMPD4-215ENST00000457039 GAGE5Q13069 117 aa9.71□□□□□ -0.86
SMPD4-215ENST00000457039 GAGE13Q4V321 117 aa9.71□□□□□ -0.86
SMPD4-215ENST00000457039 C10orf91Q5T1B1 145 aa9.71□□□□□ -0.86
SMPD4-215ENST00000457039 F5H697 171 aa9.7□□□□□ -0.86
SMPD4-215ENST00000457039 M0QY20 66 aa9.7□□□□□ -0.86
SMPD4-215ENST00000457039 PPP1R2P9O14990 202 aa9.7□□□□□ -0.86
SMPD4-215ENST00000457039 SUMO4Q6EEV6 95 aa9.7□□□□□ -0.86
SMPD4-215ENST00000457039 NEXN-AS1Q8NBZ9 246 aa9.7□□□□□ -0.86
SMPD4-215ENST00000457039 BORCS7Q96B45 105 aa9.7□□□□□ -0.86
SMPD4-215ENST00000457039 MT-ND4LP03901 98 aa9.69□□□□□ -0.86
SMPD4-215ENST00000457039 MGPP08493 103 aa9.69□□□□□ -0.86
SMPD4-215ENST00000457039 ATP6V0E2Q8NHE4 81 aa9.69□□□□□ -0.86
SMPD4-215ENST00000457039 ANAPC16Q96DE5 110 aa9.69□□□□□ -0.86
SMPD4-215ENST00000457039 TRBV7-3A0A075B6L6 115 aa9.68□□□□□ -0.86
SMPD4-215ENST00000457039 UBE2D3P61077 147 aa9.68□□□□□ -0.86
SMPD4-215ENST00000457039 UBE2D2P62837 147 aa9.68□□□□□ -0.86
SMPD4-215ENST00000457039 RPL36AP83881 106 aaKnown RBP9.68□□□□□ -0.86
SMPD4-215ENST00000457039 RIGQ13278 110 aa9.68□□□□□ -0.86
SMPD4-215ENST00000457039 RPL36ALQ969Q0 106 aaKnown RBP9.68□□□□□ -0.86
SMPD4-215ENST00000457039 TMEM191AQ9H0A3 160 aa9.68□□□□□ -0.86
SMPD4-215ENST00000457039 GTSF1LQ9H1H1 148 aa9.68□□□□□ -0.86
SMPD4-215ENST00000457039 Q9H8V8 135 aa9.68□□□□□ -0.86
SMPD4-215ENST00000457039 CARHSP1Q9Y2V2 147 aaKnown RBP9.68□□□□□ -0.86
SMPD4-215ENST00000457039 DNAH17Q9UFH2 4485 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms