RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 RNF182Q8N6D2 247 aa3.78□□□□□ -1.8
HMGB1P4-201ENST00000455362 DCANP1Q8TF63 244 aa3.78□□□□□ -1.8
HMGB1P4-201ENST00000455362 TMEM208Q9BTX3 173 aa3.78□□□□□ -1.8
HMGB1P4-201ENST00000455362 MS4A6AQ9H2W1 248 aa3.78□□□□□ -1.8
HMGB1P4-201ENST00000455362 SPANXB1Q9NS25 103 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P4-201ENST00000455362 NAT8Q9UHE5 227 aa3.78□□□□□ -1.8
HMGB1P4-201ENST00000455362 LY96Q9Y6Y9 160 aa3.78□□□□□ -1.8
HMGB1P4-201ENST00000455362 IGHV1OR15-1A0A075B7D0 117 aa3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 TRAV9-2A0A087WT02 112 aa3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 TRAV8-1A0A0A6YYK1 113 aa3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 TRBV6-1A0A0K0K1D8 114 aa3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 FAM240AA0A1B0GVK7 77 aa3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 C7orf77A4D0Y5 90 aa3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 B4DEV8 164 aa3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 C9JCJ5 164 aa3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 IGLV2-8P01709 118 aa3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 PRB4P10163 310 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 GNG4P50150 75 aa3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 RPL23P62829 140 aaKnown RBP3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 RNF212Q495C1 297 aa3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 CENPWQ5EE01 88 aa3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 LINC01551Q86U37 167 aa3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 BAGE2Q86Y30 109 aa3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 TMEM75Q8N9X5 138 aa3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 FMC1Q96HJ9 113 aa3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 IGF2BP2-AS1Q96M15 143 aa3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 VGLL1Q99990 258 aa3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 XCL2Q9UBD3 114 aa3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 PSG8Q9UQ74 426 aa3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 NBEAL2Q6ZNJ1 2754 aa3.77□□□□□ -1.81
HMGB1P4-201ENST00000455362 IGKV2-40A0A087WW87 121 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 A0A087WWC5 75 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 TRAV2A0A0B4J234 112 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 RBAKDNA6NC62 111 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 IZUMO1RA6ND01 250 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 H7C1H1 209 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 LTAP01374 205 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 IGKV2D-40P01614 121 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 MT-ND4LP03901 98 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 ZNF25P17030 456 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 PFN2P35080 140 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 UBE2G1P62253 170 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 ERCC8Q13216 396 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 RHEBQ15382 184 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 ADIRFQ15847 76 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 ZNF876PQ49A33 203 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 PRNTQ86SH4 94 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 TMEM61Q8N0U2 210 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 ZFP82Q8N141 532 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 FAM24BQ8N5W8 94 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 DYNLRB2Q8TF09 96 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 TMEM158Q8WZ71 300 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 PTH2Q96A98 100 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 C20orf144Q9BQM9 153 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 AGPAT4-IT1Q9H0P7 198 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 ZFP30Q9Y2G7 519 aa3.76□□□□□ -1.81
HMGB1P4-201ENST00000455362 F5H768 121 aa3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 K7EP13 123 aa3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 IGLV1-51P01701 117 aa3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 ZNF688P0C7X2 276 aa3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 ZNF705DP0CH99 300 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 ZNF705BP0CI00 300 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 MGST1P10620 155 aaKnown RBP3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 ZNF138P52744 262 aa3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 DEFB1P60022 68 aa3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 SNRPD3P62318 126 aaKnown RBP3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 PSMG4Q5JS54 123 aa3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 DNLZQ5SXM8 178 aa3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 SMIM29Q86T20 159 aa3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 Q86TA4 180 aa3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 TMEM183AQ8IXX5 376 aa3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 C3orf56Q8N813 242 aa3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 Q8NBF4 154 aa3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 WFDC9Q8NEX5 89 aa3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 OR8A1Q8NGG7 326 aa3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 OR10J6PQ8NGY7 276 aa3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 NTN5Q8WTR8 489 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 SMIM12Q96EX1 92 aa3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 LINC00477Q96M19 166 aa3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 RPS10P5Q9NQ39 176 aa3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 DNAH3Q8TD57 4116 aa3.75□□□□□ -1.81
HMGB1P4-201ENST00000455362 A0A0J9YX75 114 aa3.74□□□□□ -1.81
HMGB1P4-201ENST00000455362 OR4C46A6NHA9 309 aa3.74□□□□□ -1.81
HMGB1P4-201ENST00000455362 IFITM10A6NMD0 228 aa3.74□□□□□ -1.81
HMGB1P4-201ENST00000455362 DDTP30046 118 aa3.74□□□□□ -1.81
HMGB1P4-201ENST00000455362 CRIP1P50238 77 aa3.74□□□□□ -1.81
HMGB1P4-201ENST00000455362 TMEM78Q5T7P6 136 aa3.74□□□□□ -1.81
HMGB1P4-201ENST00000455362 LINC00322Q6ZN03 302 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P4-201ENST00000455362 Q6ZVH6 145 aa3.74□□□□□ -1.81
HMGB1P4-201ENST00000455362 OR2K2Q8NGT1 345 aa3.74□□□□□ -1.81
HMGB1P4-201ENST00000455362 Q8TAT8 98 aa3.74□□□□□ -1.81
HMGB1P4-201ENST00000455362 MRAP2Q96G30 205 aa3.74□□□□□ -1.81
HMGB1P4-201ENST00000455362 ZC2HC1AQ96GY0 325 aa3.74□□□□□ -1.81
HMGB1P4-201ENST00000455362 SFRP2Q96HF1 295 aa3.74□□□□□ -1.81
HMGB1P4-201ENST00000455362 RNASE7Q9H1E1 156 aaKnown RBP3.74□□□□□ -1.81
HMGB1P4-201ENST00000455362 TUBA4BQ9H853 241 aa3.74□□□□□ -1.81
HMGB1P4-201ENST00000455362 OSTCQ9NRP0 149 aa3.74□□□□□ -1.81
HMGB1P4-201ENST00000455362 SMCO4Q9NRQ5 59 aa3.74□□□□□ -1.81
HMGB1P4-201ENST00000455362 TMEM242Q9NWH2 141 aa3.74□□□□□ -1.81
HMGB1P4-201ENST00000455362 ZNF492Q9P255 531 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms