RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 ZNF479Q96JC4 524 aa10.03□□□□□ -0.8
LINC00343-203ENST00000454555 NAA38Q9BRA0 125 aaKnown RBP10.03□□□□□ -0.8
LINC00343-203ENST00000454555 IGHV3OR16-8A0A075B7F1 116 aa10.03□□□□□ -0.8
LINC00343-203ENST00000454555 MYMXA0A1B0GTQ4 84 aa10.03□□□□□ -0.8
LINC00343-203ENST00000454555 TMEM238LA0A1B0GVL6 79 aa10.03□□□□□ -0.8
LINC00343-203ENST00000454555 A6NJY4 79 aa10.03□□□□□ -0.8
LINC00343-203ENST00000454555 NDUFA4O00483 81 aa10.03□□□□□ -0.8
LINC00343-203ENST00000454555 ASIPP42127 132 aa10.03□□□□□ -0.8
LINC00343-203ENST00000454555 C12orf74Q32Q52 190 aa10.03□□□□□ -0.8
LINC00343-203ENST00000454555 TM4SF20Q53R12 229 aa10.03□□□□□ -0.8
LINC00343-203ENST00000454555 C19orf54Q5BKX5 351 aa10.03□□□□□ -0.8
LINC00343-203ENST00000454555 HIST1H4GQ99525 98 aa10.03□□□□□ -0.8
LINC00343-203ENST00000454555 CHTOPQ9Y3Y2 248 aaKnown RBP10.03□□□□□ -0.8
LINC00343-203ENST00000454555 TRBV7-3A0A075B6L6 115 aa10.02□□□□□ -0.81
LINC00343-203ENST00000454555 H3BVH4 76 aa10.02□□□□□ -0.81
LINC00343-203ENST00000454555 SAMD13Q5VXD3 122 aa10.02□□□□□ -0.81
LINC00343-203ENST00000454555 POM121L12Q8N7R1 296 aa10.02□□□□□ -0.81
LINC00343-203ENST00000454555 NEXN-AS1Q8NBZ9 246 aa10.02□□□□□ -0.81
LINC00343-203ENST00000454555 SCGB3A1Q96QR1 104 aa10.02□□□□□ -0.81
LINC00343-203ENST00000454555 TRAV41A0A0B4J266 112 aa10.01□□□□□ -0.81
LINC00343-203ENST00000454555 BLCAPP62952 87 aa10.01□□□□□ -0.81
LINC00343-203ENST00000454555 S100A4P26447 101 aaKnown RBP10.01□□□□□ -0.81
LINC00343-203ENST00000454555 ZFAND2AQ8N6M9 145 aa10.01□□□□□ -0.81
LINC00343-203ENST00000454555 USMG5Q96IX5 58 aa10.01□□□□□ -0.81
LINC00343-203ENST00000454555 TTTY13Q9BZ97 58 aa10.01□□□□□ -0.81
LINC00343-203ENST00000454555 TEP1Q99973 2627 aaKnown RBP10□□□□□ -0.81
LINC00343-203ENST00000454555 TRAV26-2A0A0B4J265 109 aa10□□□□□ -0.81
LINC00343-203ENST00000454555 IGHV3-66A0A0C4DH42 116 aa10□□□□□ -0.81
LINC00343-203ENST00000454555 TMEM238C9JI98 176 aa10□□□□□ -0.81
LINC00343-203ENST00000454555 G3V318 75 aa10□□□□□ -0.81
LINC00343-203ENST00000454555 NXPH4O95158 308 aa10□□□□□ -0.81
LINC00343-203ENST00000454555 IGHG2P01859 326 aa10□□□□□ -0.81
LINC00343-203ENST00000454555 ARL3P36405 182 aa10□□□□□ -0.81
LINC00343-203ENST00000454555 RIPPLY3P57055 190 aa10□□□□□ -0.81
LINC00343-203ENST00000454555 RPL24P83731 157 aaKnown RBP10□□□□□ -0.81
LINC00343-203ENST00000454555 RRN3P1Q2M238 152 aa10□□□□□ -0.81
LINC00343-203ENST00000454555 Q8N2B8 174 aa10□□□□□ -0.81
LINC00343-203ENST00000454555 MAPKAPK5-AS1Q8N8E1 139 aa10□□□□□ -0.81
LINC00343-203ENST00000454555 FAM19A4Q96LR4 140 aa10□□□□□ -0.81
LINC00343-203ENST00000454555 PHLDA3Q9Y5J5 127 aa10□□□□□ -0.81
LINC00343-203ENST00000454555 SOCS3O14543 225 aa9.99□□□□□ -0.81
LINC00343-203ENST00000454555 LYRM7Q5U5X0 104 aa9.99□□□□□ -0.81
LINC00343-203ENST00000454555 RASL10AQ92737 203 aa9.99□□□□□ -0.81
LINC00343-203ENST00000454555 ZNF702PQ9H963 129 aa9.99□□□□□ -0.81
LINC00343-203ENST00000454555 CUBNO60494 3623 aa9.99□□□□□ -0.81
LINC00343-203ENST00000454555 TEX48A0A1B0GUV7 120 aa9.98□□□□□ -0.81
LINC00343-203ENST00000454555 K7ERJ3 54 aa9.98□□□□□ -0.81
LINC00343-203ENST00000454555 NDUFA7O95182 113 aa9.98□□□□□ -0.81
LINC00343-203ENST00000454555 Q6ZS46 218 aa9.98□□□□□ -0.81
LINC00343-203ENST00000454555 Q6ZSV7 163 aa9.98□□□□□ -0.81
LINC00343-203ENST00000454555 C16orf95Q9H693 158 aa9.98□□□□□ -0.81
LINC00343-203ENST00000454555 IGF1P05019 195 aa9.98□□□□□ -0.81
LINC00343-203ENST00000454555 C2orf66Q6UXQ4 117 aa9.98□□□□□ -0.81
LINC00343-203ENST00000454555 PRIMA1Q86XR5 153 aa9.98□□□□□ -0.81
LINC00343-203ENST00000454555 SPANXB1Q9NS25 103 aaPredicted RBP9.98□□□□□ -0.81
LINC00343-203ENST00000454555 ZNF580Q9UK33 172 aa9.98□□□□□ -0.81
LINC00343-203ENST00000454555 IGHV4OR15-8A0A075B7B6 117 aa9.97□□□□□ -0.81
LINC00343-203ENST00000454555 A0A087WW49 117 aa9.97□□□□□ -0.81
LINC00343-203ENST00000454555 LINC01548A6NM66 108 aa9.97□□□□□ -0.81
LINC00343-203ENST00000454555 HERVK_113P61574 105 aa9.97□□□□□ -0.81
LINC00343-203ENST00000454555 CD300EQ496F6 205 aaPredicted RBP9.97□□□□□ -0.81
LINC00343-203ENST00000454555 PRR9Q5T870 116 aa9.97□□□□□ -0.81
LINC00343-203ENST00000454555 BAALCQ8WXS3 180 aa9.97□□□□□ -0.81
LINC00343-203ENST00000454555 IGHV3OR16-13A0A075B7E8 117 aa9.96□□□□□ -0.81
LINC00343-203ENST00000454555 IGHV3-74A0A0B4J1X5 117 aa9.96□□□□□ -0.81
LINC00343-203ENST00000454555 GAGE13Q4V321 117 aa9.96□□□□□ -0.81
LINC00343-203ENST00000454555 ATP6V0E2Q8NHE4 81 aa9.96□□□□□ -0.81
LINC00343-203ENST00000454555 C20orf173Q96LM9 149 aa9.96□□□□□ -0.81
LINC00343-203ENST00000454555 SIGMAR1Q99720 223 aa9.96□□□□□ -0.81
LINC00343-203ENST00000454555 CYSLTR1Q9Y271 337 aa9.96□□□□□ -0.81
LINC00343-203ENST00000454555 TMEM141Q96I45 108 aa9.96□□□□□ -0.82
LINC00343-203ENST00000454555 SPATA25Q9BR10 227 aa9.96□□□□□ -0.82
LINC00343-203ENST00000454555 IGHV3-49A0A0A0MS15 119 aa9.95□□□□□ -0.82
LINC00343-203ENST00000454555 LGALS1P09382 135 aaKnown RBP9.95□□□□□ -0.82
LINC00343-203ENST00000454555 ANXA2RQ3ZCQ2 193 aa9.95□□□□□ -0.82
LINC00343-203ENST00000454555 GPHB5Q86YW7 130 aa9.95□□□□□ -0.82
LINC00343-203ENST00000454555 PRSS29PA6NIE9 313 aa9.94□□□□□ -0.82
LINC00343-203ENST00000454555 LINC01006Q8NI28 216 aa9.94□□□□□ -0.82
LINC00343-203ENST00000454555 TIMM17AQ99595 171 aa9.94□□□□□ -0.82
LINC00343-203ENST00000454555 PRADC1Q9BSG0 188 aa9.94□□□□□ -0.82
LINC00343-203ENST00000454555 C14orf178Q8N769 122 aaPredicted RBP9.93□□□□□ -0.82
LINC00343-203ENST00000454555 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.93□□□□□ -0.82
LINC00343-203ENST00000454555 NIPBLQ6KC79 2804 aaeCLIP9.93□□□□□ -0.82
LINC00343-203ENST00000454555 ZNF815PA8K554 130 aa9.93□□□□□ -0.82
LINC00343-203ENST00000454555 H3BMG7 143 aa9.93□□□□□ -0.82
LINC00343-203ENST00000454555 MGPP08493 103 aa9.93□□□□□ -0.82
LINC00343-203ENST00000454555 RNASE3P12724 160 aaKnown RBP9.93□□□□□ -0.82
LINC00343-203ENST00000454555 ID1P41134 155 aa9.93□□□□□ -0.82
LINC00343-203ENST00000454555 UBE2D1P51668 147 aa9.93□□□□□ -0.82
LINC00343-203ENST00000454555 TMEM95Q3KNT9 176 aa9.93□□□□□ -0.82
LINC00343-203ENST00000454555 DLX4Q92988 240 aaPredicted RBP9.93□□□□□ -0.82
LINC00343-203ENST00000454555 ODF3Q96PU9 254 aa9.93□□□□□ -0.82
LINC00343-203ENST00000454555 VCX2Q9H322 139 aa9.93□□□□□ -0.82
LINC00343-203ENST00000454555 PRO0461Q9UI25 63 aa9.93□□□□□ -0.82
LINC00343-203ENST00000454555 GAGE12HA6NDE8 117 aa9.92□□□□□ -0.82
LINC00343-203ENST00000454555 KLLNB2CW77 178 aa9.92□□□□□ -0.82
LINC00343-203ENST00000454555 K7EMT4 169 aa9.92□□□□□ -0.82
LINC00343-203ENST00000454555 VCYO14598 125 aa9.92□□□□□ -0.82
LINC00343-203ENST00000454555 CFHR3Q02985 330 aa9.92□□□□□ -0.82
LINC00343-203ENST00000454555 PMVKQ15126 192 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms