RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 CD5LO43866 347 aa9.04□□□□□ -0.96
SMPD4-213ENST00000454468 DEFB125Q8N687 156 aa9.04□□□□□ -0.96
SMPD4-213ENST00000454468 UBE2E2Q96LR5 201 aa9.04□□□□□ -0.96
SMPD4-213ENST00000454468 MDFICQ9P1T7 246 aa9.04□□□□□ -0.96
SMPD4-213ENST00000454468 FABP2P12104 132 aa9.03□□□□□ -0.96
SMPD4-213ENST00000454468 SRSF9Q13242 221 aaKnown RBP eCLIP9.03□□□□□ -0.96
SMPD4-213ENST00000454468 ZNF876PQ49A33 203 aa9.03□□□□□ -0.96
SMPD4-213ENST00000454468 APRG1Q8IVJ8 170 aa9.03□□□□□ -0.96
SMPD4-213ENST00000454468 KIR2DL4Q99706 377 aa9.03□□□□□ -0.96
SMPD4-213ENST00000454468 SHISA2Q6UWI4 295 aa9.03□□□□□ -0.96
SMPD4-213ENST00000454468 VPREB3Q9UKI3 123 aa9.03□□□□□ -0.96
SMPD4-213ENST00000454468 HERV-K104P63124 156 aa9.03□□□□□ -0.96
SMPD4-213ENST00000454468 C2orf66Q6UXQ4 117 aa9.03□□□□□ -0.96
SMPD4-213ENST00000454468 GPHB5Q86YW7 130 aa9.03□□□□□ -0.96
SMPD4-213ENST00000454468 MTURNQ8N3F0 131 aa9.03□□□□□ -0.96
SMPD4-213ENST00000454468 SMIM2Q9BVW6 85 aa9.03□□□□□ -0.96
SMPD4-213ENST00000454468 YAE1D1Q9NRH1 226 aa9.03□□□□□ -0.96
SMPD4-213ENST00000454468 MXRA5Q9NR99 2828 aa9.02□□□□□ -0.96
SMPD4-213ENST00000454468 LGALS9BQ3B8N2 356 aa9.02□□□□□ -0.96
SMPD4-213ENST00000454468 LGALS9CQ6DKI2 356 aa9.02□□□□□ -0.96
SMPD4-213ENST00000454468 ZFHX3Q15911 3703 aa9.02□□□□□ -0.97
SMPD4-213ENST00000454468 K7ERJ3 54 aa9.02□□□□□ -0.97
SMPD4-213ENST00000454468 BOD1L2Q8IYS8 172 aa9.02□□□□□ -0.97
SMPD4-213ENST00000454468 ZNF843Q8N446 348 aa9.02□□□□□ -0.97
SMPD4-213ENST00000454468 IGKV2D-26A0A0A0MRZ7 120 aa9.02□□□□□ -0.97
SMPD4-213ENST00000454468 IGHV3-16A0A0C4DH30 117 aa9.02□□□□□ -0.97
SMPD4-213ENST00000454468 GAGE12HA6NDE8 117 aa9.02□□□□□ -0.97
SMPD4-213ENST00000454468 OR11H12B2RN74 326 aa9.02□□□□□ -0.97
SMPD4-213ENST00000454468 OR11H2Q8NH07 326 aa9.02□□□□□ -0.97
SMPD4-213ENST00000454468 LINC01587Q99440 93 aa9.02□□□□□ -0.97
SMPD4-213ENST00000454468 GATA3P23771 443 aa9.01□□□□□ -0.97
SMPD4-213ENST00000454468 RPL39P62891 51 aaKnown RBP9.01□□□□□ -0.97
SMPD4-213ENST00000454468 GATD1Q8NB37 220 aa9.01□□□□□ -0.97
SMPD4-213ENST00000454468 WFDC11Q8NEX6 87 aa9.01□□□□□ -0.97
SMPD4-213ENST00000454468 CRXO43186 299 aaPredicted RBP9.01□□□□□ -0.97
SMPD4-213ENST00000454468 XCL2Q9UBD3 114 aa9.01□□□□□ -0.97
SMPD4-213ENST00000454468 CYSLTR1Q9Y271 337 aa9.01□□□□□ -0.97
SMPD4-213ENST00000454468 U3KQE9 123 aa9.01□□□□□ -0.97
SMPD4-213ENST00000454468 SYT8Q8NBV8 401 aa9□□□□□ -0.97
SMPD4-213ENST00000454468 TP53TG1Q9Y2A0 90 aa9□□□□□ -0.97
SMPD4-213ENST00000454468 ITPR2Q14571 2701 aa9□□□□□ -0.97
SMPD4-213ENST00000454468 DEFB113Q30KQ7 82 aa9□□□□□ -0.97
SMPD4-213ENST00000454468 RNASE13Q5GAN3 156 aaKnown RBP9□□□□□ -0.97
SMPD4-213ENST00000454468 Q8N1Y9 231 aa9□□□□□ -0.97
SMPD4-213ENST00000454468 SMIM20Q8N5G0 67 aa9□□□□□ -0.97
SMPD4-213ENST00000454468 SDHAF1A6NFY7 115 aa8.99□□□□□ -0.97
SMPD4-213ENST00000454468 MRPL53Q96EL3 112 aaKnown RBP8.99□□□□□ -0.97
SMPD4-213ENST00000454468 H7C2G1 150 aa8.99□□□□□ -0.97
SMPD4-213ENST00000454468 DUSP14O95147 198 aaKnown RBP8.99□□□□□ -0.97
SMPD4-213ENST00000454468 IGHV3-53P01767 116 aa8.99□□□□□ -0.97
SMPD4-213ENST00000454468 ODF1Q14990 250 aa8.99□□□□□ -0.97
SMPD4-213ENST00000454468 ORMDL2Q53FV1 153 aa8.99□□□□□ -0.97
SMPD4-213ENST00000454468 A6NJY4 79 aa8.99□□□□□ -0.97
SMPD4-213ENST00000454468 IGHV4-31P0DP07 118 aa8.99□□□□□ -0.97
SMPD4-213ENST00000454468 ADAMTSL5Q6ZMM2 481 aa8.99□□□□□ -0.97
SMPD4-213ENST00000454468 PHLDA1Q8WV24 401 aaPredicted RBP8.98□□□□□ -0.97
SMPD4-213ENST00000454468 RASL10AQ92737 203 aa8.98□□□□□ -0.97
SMPD4-213ENST00000454468 OPRPNQ99935 248 aaPredicted RBP8.98□□□□□ -0.97
SMPD4-213ENST00000454468 U3KQK5 164 aa8.98□□□□□ -0.97
SMPD4-213ENST00000454468 PSMB8P28062 276 aa8.98□□□□□ -0.97
SMPD4-213ENST00000454468 MRAP2Q96G30 205 aa8.98□□□□□ -0.97
SMPD4-213ENST00000454468 IGHV3-38A0A0C4DH36 116 aa8.98□□□□□ -0.97
SMPD4-213ENST00000454468 B5MCH6 92 aa8.98□□□□□ -0.97
SMPD4-213ENST00000454468 H3BUA1 57 aa8.98□□□□□ -0.97
SMPD4-213ENST00000454468 IGLV1-40P01703 118 aa8.98□□□□□ -0.97
SMPD4-213ENST00000454468 SRSF2Q01130 221 aaKnown RBP8.98□□□□□ -0.97
SMPD4-213ENST00000454468 CHAC1Q9BUX1 264 aa8.98□□□□□ -0.97
SMPD4-213ENST00000454468 K7EP34 96 aa8.97□□□□□ -0.97
SMPD4-213ENST00000454468 APOMO95445 188 aa8.97□□□□□ -0.97
SMPD4-213ENST00000454468 LGALS1P09382 135 aaKnown RBP8.97□□□□□ -0.97
SMPD4-213ENST00000454468 RNASE3P12724 160 aaKnown RBP8.97□□□□□ -0.97
SMPD4-213ENST00000454468 NSUN5P1Q3KNT7 163 aa8.97□□□□□ -0.97
SMPD4-213ENST00000454468 ANAPC13Q9BS18 74 aa8.97□□□□□ -0.97
SMPD4-213ENST00000454468 IGHV1OR15-1A0A075B7D0 117 aa8.97□□□□□ -0.97
SMPD4-213ENST00000454468 P0DMU3 169 aa8.97□□□□□ -0.97
SMPD4-213ENST00000454468 FAM231AP0DMU4 169 aa8.97□□□□□ -0.97
SMPD4-213ENST00000454468 FAM231CP0DMU5 169 aa8.97□□□□□ -0.97
SMPD4-213ENST00000454468 SUMO4Q6EEV6 95 aa8.97□□□□□ -0.97
SMPD4-213ENST00000454468 TMEM61Q8N0U2 210 aa8.97□□□□□ -0.97
SMPD4-213ENST00000454468 NRACQ8N912 160 aa8.97□□□□□ -0.97
SMPD4-213ENST00000454468 SMIM13P0DJ93 91 aa8.96□□□□□ -0.97
SMPD4-213ENST00000454468 ETDBQ3ZM63 59 aa8.96□□□□□ -0.97
SMPD4-213ENST00000454468 PRSS29PA6NIE9 313 aa8.96□□□□□ -0.98
SMPD4-213ENST00000454468 ZNF815PA8K554 130 aa8.96□□□□□ -0.98
SMPD4-213ENST00000454468 RAX2Q96IS3 184 aa8.96□□□□□ -0.98
SMPD4-213ENST00000454468 H7C1H1 209 aa8.96□□□□□ -0.98
SMPD4-213ENST00000454468 DGAT2L7PQ6IED9 249 aa8.96□□□□□ -0.98
SMPD4-213ENST00000454468 C2orf91Q6ZV80 131 aa8.96□□□□□ -0.98
SMPD4-213ENST00000454468 LENEPQ9Y5L5 61 aa8.96□□□□□ -0.98
SMPD4-213ENST00000454468 LOC107984156A0A0G2JMH3 177 aa8.95□□□□□ -0.98
SMPD4-213ENST00000454468 ARL17AQ8IVW1 177 aa8.95□□□□□ -0.98
SMPD4-213ENST00000454468 DCANP1Q8TF63 244 aa8.95□□□□□ -0.98
SMPD4-213ENST00000454468 IGKV3OR2-268A0A0C4DH90 116 aa8.95□□□□□ -0.98
SMPD4-213ENST00000454468 FXYD2P54710 66 aa8.95□□□□□ -0.98
SMPD4-213ENST00000454468 OR5A1Q8NGJ0 315 aa8.95□□□□□ -0.98
SMPD4-213ENST00000454468 DLX4Q92988 240 aaPredicted RBP8.95□□□□□ -0.98
SMPD4-213ENST00000454468 TNFRSF18Q9Y5U5 241 aa8.95□□□□□ -0.98
SMPD4-213ENST00000454468 TRBV25-1A0A075B6N4 114 aa8.94□□□□□ -0.98
SMPD4-213ENST00000454468 A0A0J9YX75 114 aa8.94□□□□□ -0.98
SMPD4-213ENST00000454468 C9orf118A6NHY6 69 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms