RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 M0R036 132 aa3.89□□□□□ -1.79
HLA-DPA3-207ENST00000454398 HLA-DQA1P01909 254 aa3.89□□□□□ -1.79
HLA-DPA3-207ENST00000454398 MT1HL1P0DM35 61 aa3.89□□□□□ -1.79
HLA-DPA3-207ENST00000454398 MGST1P10620 155 aaKnown RBP3.89□□□□□ -1.79
HLA-DPA3-207ENST00000454398 TAS2R45P59539 299 aa3.89□□□□□ -1.79
HLA-DPA3-207ENST00000454398 FAM74A1Q5RGS3 127 aa3.89□□□□□ -1.79
HLA-DPA3-207ENST00000454398 PPP1R1CQ8WVI7 109 aa3.89□□□□□ -1.79
HLA-DPA3-207ENST00000454398 TMED6Q8WW62 240 aa3.89□□□□□ -1.79
HLA-DPA3-207ENST00000454398 DAZAP1Q96EP5 407 aaKnown RBP3.89□□□□□ -1.79
HLA-DPA3-207ENST00000454398 LINC00479Q96M42 142 aa3.89□□□□□ -1.79
HLA-DPA3-207ENST00000454398 LENEPQ9Y5L5 61 aa3.89□□□□□ -1.79
HLA-DPA3-207ENST00000454398 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.89□□□□□ -1.79
HLA-DPA3-207ENST00000454398 TMSB15BA0A087X1C1 80 aa3.88□□□□□ -1.79
HLA-DPA3-207ENST00000454398 IGKV3D-20A0A0C4DH25 116 aa3.88□□□□□ -1.79
HLA-DPA3-207ENST00000454398 TCRAP04437 139 aa3.88□□□□□ -1.79
HLA-DPA3-207ENST00000454398 S100A12P80511 92 aa3.88□□□□□ -1.79
HLA-DPA3-207ENST00000454398 NIT1Q86X76 327 aa3.88□□□□□ -1.79
HLA-DPA3-207ENST00000454398 CBLN2Q8IUK8 224 aa3.88□□□□□ -1.79
HLA-DPA3-207ENST00000454398 ZFP82Q8N141 532 aa3.88□□□□□ -1.79
HLA-DPA3-207ENST00000454398 KCNS1Q96KK3 526 aa3.88□□□□□ -1.79
HLA-DPA3-207ENST00000454398 NDFIP1Q9BT67 221 aa3.88□□□□□ -1.79
HLA-DPA3-207ENST00000454398 ZNF471Q9BX82 626 aaPredicted RBP3.88□□□□□ -1.79
HLA-DPA3-207ENST00000454398 SH3BGRL3Q9H299 93 aa3.88□□□□□ -1.79
HLA-DPA3-207ENST00000454398 URGCP-MRPS24S4R325 110 aa3.88□□□□□ -1.79
HLA-DPA3-207ENST00000454398 LPAP08519 4548 aa3.88□□□□□ -1.79
HLA-DPA3-207ENST00000454398 GRIFINA4D1Z8 144 aa3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 HMSDA8MTL9 139 aa3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 USP17L23D6RBM5 183 aa3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 F8W036 122 aa3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 M0R381 172 aa3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 BCL2L11O43521 198 aa3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 OXTP01178 125 aa3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 S100A9P06702 114 aaKnown RBP3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 CHTF8P0CG12 524 aa3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 GCHFRP30047 84 aa3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 CDC34P49427 236 aaPredicted RBP3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 BLOC1S1P78537 153 aa3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 MPV17L2Q567V2 206 aa3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 DMRTA1Q5VZB9 504 aa3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 UFSP1Q6NVU6 142 aa3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 Q86TA4 180 aa3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 LINC00469Q8N7U9 141 aa3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 C15orf54Q8N8G6 183 aa3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 CYB561D1Q8N8Q1 229 aa3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 C5orf17Q8NAS9 161 aa3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 HSD17B11Q8NBQ5 300 aa3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 SCGB1C1Q8TD33 95 aa3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 PSG8Q9UQ74 426 aa3.87□□□□□ -1.79
HLA-DPA3-207ENST00000454398 A0A087WX48 190 aa3.86□□□□□ -1.79
HLA-DPA3-207ENST00000454398 A0A0D9SG52 128 aa3.86□□□□□ -1.79
HLA-DPA3-207ENST00000454398 A0A1W2PPV4 95 aa3.86□□□□□ -1.79
HLA-DPA3-207ENST00000454398 RNF222A6NCQ9 220 aa3.86□□□□□ -1.79
HLA-DPA3-207ENST00000454398 LINC00587B1AMM8 73 aa3.86□□□□□ -1.79
HLA-DPA3-207ENST00000454398 S100A4P26447 101 aaKnown RBP3.86□□□□□ -1.79
HLA-DPA3-207ENST00000454398 RPL12P30050 165 aaKnown RBP3.86□□□□□ -1.79
HLA-DPA3-207ENST00000454398 ASIPP42127 132 aa3.86□□□□□ -1.79
HLA-DPA3-207ENST00000454398 UBE2G2P60604 165 aa3.86□□□□□ -1.79
HLA-DPA3-207ENST00000454398 RAB5BP61020 215 aa3.86□□□□□ -1.79
HLA-DPA3-207ENST00000454398 ACOT6Q3I5F7 207 aaPredicted RBP3.86□□□□□ -1.79
HLA-DPA3-207ENST00000454398 PQLC2Q6ZP29 291 aa3.86□□□□□ -1.79
HLA-DPA3-207ENST00000454398 SVBPQ8N300 66 aa3.86□□□□□ -1.79
HLA-DPA3-207ENST00000454398 Q8N976 141 aa3.86□□□□□ -1.79
HLA-DPA3-207ENST00000454398 OR10G9Q8NGN4 311 aa3.86□□□□□ -1.79
HLA-DPA3-207ENST00000454398 OR10G7Q8NGN6 311 aa3.86□□□□□ -1.79
HLA-DPA3-207ENST00000454398 OR2G3Q8NGZ4 309 aa3.86□□□□□ -1.79
HLA-DPA3-207ENST00000454398 STOML3Q8TAV4 291 aa3.86□□□□□ -1.79
HLA-DPA3-207ENST00000454398 ZC2HC1AQ96GY0 325 aa3.86□□□□□ -1.79
HLA-DPA3-207ENST00000454398 ARL2-SNX15V9GYD0 113 aa3.86□□□□□ -1.79
HLA-DPA3-207ENST00000454398 MUC21A0A0G2JKD1 596 aa3.85□□□□□ -1.79
HLA-DPA3-207ENST00000454398 MUC21A0A140T8X8 626 aa3.85□□□□□ -1.79
HLA-DPA3-207ENST00000454398 A8MWV9 139 aa3.85□□□□□ -1.79
HLA-DPA3-207ENST00000454398 C1orf196B1AJZ1 125 aa3.85□□□□□ -1.79
HLA-DPA3-207ENST00000454398 B4DEV8 164 aa3.85□□□□□ -1.79
HLA-DPA3-207ENST00000454398 TAAR5O14804 337 aa3.85□□□□□ -1.79
HLA-DPA3-207ENST00000454398 SH2D1AO60880 128 aa3.85□□□□□ -1.79
HLA-DPA3-207ENST00000454398 CRPP02741 224 aa3.85□□□□□ -1.79
HLA-DPA3-207ENST00000454398 PRSS1P07477 247 aa3.85□□□□□ -1.79
HLA-DPA3-207ENST00000454398 SUMO1P63165 101 aaKnown RBP3.85□□□□□ -1.79
HLA-DPA3-207ENST00000454398 UQCC3Q6UW78 93 aa3.85□□□□□ -1.79
HLA-DPA3-207ENST00000454398 ENHOQ6UWT2 76 aa3.85□□□□□ -1.79
HLA-DPA3-207ENST00000454398 KCNRGQ8N5I3 272 aa3.85□□□□□ -1.79
HLA-DPA3-207ENST00000454398 ARL6IP6Q8N6S5 226 aa3.85□□□□□ -1.79
HLA-DPA3-207ENST00000454398 SFT2D1Q8WV19 159 aa3.85□□□□□ -1.79
HLA-DPA3-207ENST00000454398 RAB24Q969Q5 203 aa3.85□□□□□ -1.79
HLA-DPA3-207ENST00000454398 RMI2Q96E14 147 aa3.85□□□□□ -1.79
HLA-DPA3-207ENST00000454398 C1orf43Q9BWL3 253 aa3.85□□□□□ -1.79
HLA-DPA3-207ENST00000454398 IGLV10-54A0A075B6I4 117 aa3.84□□□□□ -1.79
HLA-DPA3-207ENST00000454398 A0A087WWC5 75 aa3.84□□□□□ -1.79
HLA-DPA3-207ENST00000454398 TMEM218A2RU14 115 aa3.84□□□□□ -1.79
HLA-DPA3-207ENST00000454398 RAB19A4D1S5 217 aa3.84□□□□□ -1.79
HLA-DPA3-207ENST00000454398 TMEM262E9PQX1 116 aa3.84□□□□□ -1.79
HLA-DPA3-207ENST00000454398 SNAPINO95295 136 aa3.84□□□□□ -1.79
HLA-DPA3-207ENST00000454398 ANGP03950 147 aaKnown RBP3.84□□□□□ -1.79
HLA-DPA3-207ENST00000454398 S100A6P06703 90 aa3.84□□□□□ -1.79
HLA-DPA3-207ENST00000454398 ARMS2P0C7Q2 107 aa3.84□□□□□ -1.79
HLA-DPA3-207ENST00000454398 STAG3L2P0CL84 134 aa3.84□□□□□ -1.79
HLA-DPA3-207ENST00000454398 STAG3L3P0CL85 134 aa3.84□□□□□ -1.79
HLA-DPA3-207ENST00000454398 SMIM6P0DI80 62 aa3.84□□□□□ -1.79
HLA-DPA3-207ENST00000454398 TPT1P13693 172 aaKnown RBP3.84□□□□□ -1.79
HLA-DPA3-207ENST00000454398 FGF8P55075 233 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms