RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 TMEM141Q96I45 108 aa1.16□□□□□ -2.22
HMGN3P1-201ENST00000453847 TRAV12-3A0A0B4J271 114 aa1.15□□□□□ -2.23
HMGN3P1-201ENST00000453847 FAM92AA1XBS5 289 aa1.15□□□□□ -2.23
HMGN3P1-201ENST00000453847 K7EIL1 84 aa1.15□□□□□ -2.23
HMGN3P1-201ENST00000453847 ZNF56Q15929 161 aa1.15□□□□□ -2.23
HMGN3P1-201ENST00000453847 KRTAP21-2Q3LI59 83 aa1.15□□□□□ -2.23
HMGN3P1-201ENST00000453847 C9orf116Q5BN46 136 aaPredicted RBP1.15□□□□□ -2.23
HMGN3P1-201ENST00000453847 PHIPQ8WWQ0 1821 aa1.15□□□□□ -2.23
HMGN3P1-201ENST00000453847 NRXN2Q9P2S2 1712 aa1.15□□□□□ -2.23
HMGN3P1-201ENST00000453847 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.14□□□□□ -2.23
HMGN3P1-201ENST00000453847 UBE2G1P62253 170 aa1.14□□□□□ -2.23
HMGN3P1-201ENST00000453847 BTG2P78543 158 aa1.14□□□□□ -2.23
HMGN3P1-201ENST00000453847 C10orf99Q6UWK7 81 aa1.14□□□□□ -2.23
HMGN3P1-201ENST00000453847 Q6ZS92 163 aa1.14□□□□□ -2.23
HMGN3P1-201ENST00000453847 SPTSSAQ969W0 71 aa1.14□□□□□ -2.23
HMGN3P1-201ENST00000453847 MAP2P11137 1827 aaKnown RBP1.14□□□□□ -2.23
HMGN3P1-201ENST00000453847 ESPL1Q14674 2120 aa1.13□□□□□ -2.23
HMGN3P1-201ENST00000453847 ZNF518AQ6AHZ1 1483 aa1.13□□□□□ -2.23
HMGN3P1-201ENST00000453847 WDR7Q9Y4E6 1490 aa1.13□□□□□ -2.23
HMGN3P1-201ENST00000453847 A0A087WTM6 91 aa1.13□□□□□ -2.23
HMGN3P1-201ENST00000453847 TEX49A0A1B0GTD5 131 aa1.13□□□□□ -2.23
HMGN3P1-201ENST00000453847 FXYD1O00168 92 aa1.13□□□□□ -2.23
HMGN3P1-201ENST00000453847 NDUFB6O95139 128 aa1.13□□□□□ -2.23
HMGN3P1-201ENST00000453847 LY6G6CO95867 125 aa1.13□□□□□ -2.23
HMGN3P1-201ENST00000453847 S100A7L2Q5SY68 101 aa1.13□□□□□ -2.23
HMGN3P1-201ENST00000453847 PLAC4Q8WY50 150 aa1.13□□□□□ -2.23
HMGN3P1-201ENST00000453847 RERGLQ9H628 205 aa1.13□□□□□ -2.23
HMGN3P1-201ENST00000453847 DAPK1P53355 1430 aa1.13□□□□□ -2.23
HMGN3P1-201ENST00000453847 A2ML1A8K2U0 1454 aa1.12□□□□□ -2.23
HMGN3P1-201ENST00000453847 TCRBV3S1A0A5B6 114 aa1.12□□□□□ -2.23
HMGN3P1-201ENST00000453847 CLPSL1A2RUU4 121 aa1.12□□□□□ -2.23
HMGN3P1-201ENST00000453847 FGF7P21781 194 aa1.12□□□□□ -2.23
HMGN3P1-201ENST00000453847 Q6AWC8 147 aa1.12□□□□□ -2.23
HMGN3P1-201ENST00000453847 SERP1Q9Y6X1 66 aa1.12□□□□□ -2.23
HMGN3P1-201ENST00000453847 SPAG17Q6Q759 2223 aa1.11□□□□□ -2.23
HMGN3P1-201ENST00000453847 ARFGEF1Q9Y6D6 1849 aa1.11□□□□□ -2.23
HMGN3P1-201ENST00000453847 A0A1W2PPM0 123 aa1.11□□□□□ -2.23
HMGN3P1-201ENST00000453847 CCL3L1P16619 93 aa1.11□□□□□ -2.23
HMGN3P1-201ENST00000453847 ELOF1P60002 83 aaKnown RBP1.11□□□□□ -2.23
HMGN3P1-201ENST00000453847 KLKP1Q107X0 134 aa1.11□□□□□ -2.23
HMGN3P1-201ENST00000453847 Q8N8P6 123 aa1.11□□□□□ -2.23
HMGN3P1-201ENST00000453847 PP6455Q8WZ26 134 aa1.11□□□□□ -2.23
HMGN3P1-201ENST00000453847 SCN3BQ9NY72 215 aa1.11□□□□□ -2.23
HMGN3P1-201ENST00000453847 EIF4G3O43432 1585 aaKnown RBP1.11□□□□□ -2.23
HMGN3P1-201ENST00000453847 MED12Q93074 2177 aa1.11□□□□□ -2.23
HMGN3P1-201ENST00000453847 RBBP6Q7Z6E9 1792 aaKnown RBP1.11□□□□□ -2.23
HMGN3P1-201ENST00000453847 ZDBF2Q9HCK1 2354 aa1.11□□□□□ -2.23
HMGN3P1-201ENST00000453847 ROBO1Q9Y6N7 1651 aa1.1□□□□□ -2.23
HMGN3P1-201ENST00000453847 SMG6Q86US8 1419 aaKnown RBP1.1□□□□□ -2.23
HMGN3P1-201ENST00000453847 SNCGO76070 127 aa1.1□□□□□ -2.23
HMGN3P1-201ENST00000453847 PIPP12273 146 aaPredicted RBP1.1□□□□□ -2.23
HMGN3P1-201ENST00000453847 CYP2G1PQ6ZSU1 146 aa1.1□□□□□ -2.23
HMGN3P1-201ENST00000453847 KIAA0100Q14667 2235 aaKnown RBP1.09□□□□□ -2.23
HMGN3P1-201ENST00000453847 KMT2BQ9UMN6 2715 aaPredicted RBP1.09□□□□□ -2.23
HMGN3P1-201ENST00000453847 MCRIP1C9JLW8 97 aa1.09□□□□□ -2.23
HMGN3P1-201ENST00000453847 CBLN1P23435 193 aa1.09□□□□□ -2.23
HMGN3P1-201ENST00000453847 UBE2D1P51668 147 aa1.09□□□□□ -2.23
HMGN3P1-201ENST00000453847 C20orf197Q8N268 126 aa1.09□□□□□ -2.23
HMGN3P1-201ENST00000453847 NAA60Q9H7X0 242 aa1.09□□□□□ -2.23
HMGN3P1-201ENST00000453847 PARP14Q460N5 1801 aa1.09□□□□□ -2.23
HMGN3P1-201ENST00000453847 MYOM2P54296 1465 aa1.08□□□□□ -2.24
HMGN3P1-201ENST00000453847 APOC1P02654 83 aa1.08□□□□□ -2.24
HMGN3P1-201ENST00000453847 AKAIN1P0CW23 69 aa1.08□□□□□ -2.24
HMGN3P1-201ENST00000453847 INSL4Q14641 139 aa1.08□□□□□ -2.24
HMGN3P1-201ENST00000453847 SPTSSBQ8NFR3 76 aa1.08□□□□□ -2.24
HMGN3P1-201ENST00000453847 RPRMQ9NS64 109 aa1.08□□□□□ -2.24
HMGN3P1-201ENST00000453847 NWD2Q9ULI1 1742 aa1.08□□□□□ -2.24
HMGN3P1-201ENST00000453847 NAIPQ13075 1403 aa1.07□□□□□ -2.24
HMGN3P1-201ENST00000453847 CASKIN1Q8WXD9 1431 aa1.07□□□□□ -2.24
HMGN3P1-201ENST00000453847 RIMS1Q86UR5 1692 aaKnown RBP1.07□□□□□ -2.24
HMGN3P1-201ENST00000453847 IFT140Q96RY7 1462 aa1.07□□□□□ -2.24
HMGN3P1-201ENST00000453847 MIF4GDA9UHW6 222 aaKnown RBP1.07□□□□□ -2.24
HMGN3P1-201ENST00000453847 TMEM14BQ9NUH8 114 aa1.07□□□□□ -2.24
HMGN3P1-201ENST00000453847 SHROOM2Q13796 1616 aa1.07□□□□□ -2.24
HMGN3P1-201ENST00000453847 ARAP2Q8WZ64 1704 aa1.06□□□□□ -2.24
HMGN3P1-201ENST00000453847 SIPA1L3O60292 1781 aaPredicted RBP1.06□□□□□ -2.24
HMGN3P1-201ENST00000453847 PATJQ8NI35 1801 aa1.06□□□□□ -2.24
HMGN3P1-201ENST00000453847 DOCK1Q14185 1865 aa1.06□□□□□ -2.24
HMGN3P1-201ENST00000453847 TRBV10-3A0A0K0K1G6 114 aa1.06□□□□□ -2.24
HMGN3P1-201ENST00000453847 F6UZH7 168 aa1.06□□□□□ -2.24
HMGN3P1-201ENST00000453847 IFNGP01579 166 aa1.06□□□□□ -2.24
HMGN3P1-201ENST00000453847 SPINT3P49223 89 aa1.06□□□□□ -2.24
HMGN3P1-201ENST00000453847 RPL37P61927 97 aaKnown RBP1.06□□□□□ -2.24
HMGN3P1-201ENST00000453847 RBM3P98179 157 aaKnown RBP1.06□□□□□ -2.24
HMGN3P1-201ENST00000453847 RPL7L1Q6DKI1 246 aaKnown RBP1.06□□□□□ -2.24
HMGN3P1-201ENST00000453847 COPS9Q8WXC6 57 aa1.06□□□□□ -2.24
HMGN3P1-201ENST00000453847 ABCA1O95477 2261 aa1.06□□□□□ -2.24
HMGN3P1-201ENST00000453847 MED13LQ71F56 2210 aa1.05□□□□□ -2.24
HMGN3P1-201ENST00000453847 A0A096LNT2 108 aa1.05□□□□□ -2.24
HMGN3P1-201ENST00000453847 CORTO00230 105 aa1.05□□□□□ -2.24
HMGN3P1-201ENST00000453847 PRB3Q04118 309 aaPredicted RBP1.05□□□□□ -2.24
HMGN3P1-201ENST00000453847 Q56UQ5 140 aa1.05□□□□□ -2.24
HMGN3P1-201ENST00000453847 COX7B2Q8TF08 81 aa1.05□□□□□ -2.24
HMGN3P1-201ENST00000453847 TMEM203Q969S6 136 aa1.05□□□□□ -2.24
HMGN3P1-201ENST00000453847 DSCR8Q96T75 97 aa1.05□□□□□ -2.24
HMGN3P1-201ENST00000453847 TANC1Q9C0D5 1861 aa1.05□□□□□ -2.24
HMGN3P1-201ENST00000453847 FAM135AQ9P2D6 1515 aa1.05□□□□□ -2.24
HMGN3P1-201ENST00000453847 LOC285556D6RIA3 1793 aa1.04□□□□□ -2.24
HMGN3P1-201ENST00000453847 BET1LQ9NYM9 111 aa1.04□□□□□ -2.24
HMGN3P1-201ENST00000453847 TNS1Q9HBL0 1735 aaKnown RBP1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms