RNA–Protein interactions for RNA: ENST00000453724.5

RPE-215, Transcript of ribulose-5-phosphate-3-epimerase, human

TSL 5

Gene RPE, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPE-215	ENST00000453724	PPP1R2P9	O14990	202 aa		4.38	□□□□□ -1.71
RPE-215	ENST00000453724	SNAI2	O43623	268 aa		4.38	□□□□□ -1.71
RPE-215	ENST00000453724	NXPH4	O95158	308 aa		4.38	□□□□□ -1.71
RPE-215	ENST00000453724		P0DMU3	169 aa		4.38	□□□□□ -1.71
RPE-215	ENST00000453724	FAM231A	P0DMU4	169 aa		4.38	□□□□□ -1.71
RPE-215	ENST00000453724	FAM231C	P0DMU5	169 aa		4.38	□□□□□ -1.71
RPE-215	ENST00000453724	FAM3B	P58499	235 aa	Predicted RBP	4.38	□□□□□ -1.71
RPE-215	ENST00000453724	TMEM241	Q24JQ0	296 aa		4.38	□□□□□ -1.71
RPE-215	ENST00000453724	LGALS9C	Q6DKI2	356 aa		4.38	□□□□□ -1.71
RPE-215	ENST00000453724	SH2D6	Q7Z4S9	175 aa		4.38	□□□□□ -1.71
RPE-215	ENST00000453724	LINC01551	Q86U37	167 aa		4.38	□□□□□ -1.71
RPE-215	ENST00000453724	OR4C5	Q8NGB2	326 aa		4.38	□□□□□ -1.71
RPE-215	ENST00000453724	SSBP4	Q9BWG4	385 aa	Predicted RBP	4.38	□□□□□ -1.71
RPE-215	ENST00000453724	RPP21	Q9H633	154 aa	Known RBP	4.38	□□□□□ -1.71
RPE-215	ENST00000453724	NAT8	Q9UHE5	227 aa		4.38	□□□□□ -1.71
RPE-215	ENST00000453724	PRO0255	Q9UI72	69 aa		4.38	□□□□□ -1.71
RPE-215	ENST00000453724	TRBV24-1	A0A075B6N3	115 aa		4.37	□□□□□ -1.71
RPE-215	ENST00000453724	TRGV4	A0A0C4DH28	118 aa		4.37	□□□□□ -1.71
RPE-215	ENST00000453724	FAM231B	A6NCW3	169 aa		4.37	□□□□□ -1.71
RPE-215	ENST00000453724		A8MWL6	223 aa		4.37	□□□□□ -1.71
RPE-215	ENST00000453724		K7EN84	100 aa		4.37	□□□□□ -1.71
RPE-215	ENST00000453724	TRGC2	P03986	189 aa		4.37	□□□□□ -1.71
RPE-215	ENST00000453724	ARMS2	P0C7Q2	107 aa		4.37	□□□□□ -1.71
RPE-215	ENST00000453724	CTRL	P40313	264 aa		4.37	□□□□□ -1.71
RPE-215	ENST00000453724	ERVFC1-1	P60608	527 aa		4.37	□□□□□ -1.71
RPE-215	ENST00000453724	CACNG7	P62955	275 aa		4.37	□□□□□ -1.71
RPE-215	ENST00000453724	WDR73	Q6P4I2	378 aa		4.37	□□□□□ -1.71
RPE-215	ENST00000453724	FER1L6-AS1	Q8NA97	138 aa		4.37	□□□□□ -1.71
RPE-215	ENST00000453724	OR2D3	Q8NGH3	330 aa		4.37	□□□□□ -1.71
RPE-215	ENST00000453724	OCC1	Q8TAD7	63 aa		4.37	□□□□□ -1.71
RPE-215	ENST00000453724	LINC00476	Q8WZB0	136 aa		4.37	□□□□□ -1.71
RPE-215	ENST00000453724	AP1S3	Q96PC3	154 aa		4.37	□□□□□ -1.71
RPE-215	ENST00000453724	CNFN	Q9BYD5	112 aa		4.37	□□□□□ -1.71
RPE-215	ENST00000453724	GFRA4	Q9GZZ7	299 aa		4.37	□□□□□ -1.71
RPE-215	ENST00000453724	OSTC	Q9NRP0	149 aa		4.37	□□□□□ -1.71
RPE-215	ENST00000453724	APLN	Q9ULZ1	77 aa		4.37	□□□□□ -1.71
RPE-215	ENST00000453724	URGCP-MRPS24	S4R325	110 aa		4.37	□□□□□ -1.71
RPE-215	ENST00000453724	TRAV26-1	A0A087WT03	109 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	TMSB15B	A0A087X1C1	80 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	TRBV6-4	A0A1B0GX49	114 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	PGPEP1L	A6NFU8	196 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	LINC00587	B1AMM8	73 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	RS1	O15537	224 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	PAX4	O43316	350 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	GATC	O43716	136 aa	Known RBP	4.36	□□□□□ -1.71
RPE-215	ENST00000453724	HIST1H2BK	O60814	126 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	HIST1H2BJ	P06899	126 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	TRGC1	P0CF51	173 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	IGLC6	P0CF74	106 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	GATA1	P15976	413 aa	Predicted RBP	4.36	□□□□□ -1.71
RPE-215	ENST00000453724	HIST1H2BO	P23527	126 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	HIST1H2BB	P33778	126 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	CRYBA4	P53673	196 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	HIST1H2BD	P58876	126 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	HIST1H2BC	P62807	126 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	RHOH	Q15669	191 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	HIST2H2BE	Q16778	126 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.36	□□□□□ -1.71
RPE-215	ENST00000453724	SPANXN1	Q5VSR9	72 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	CFAP126	Q5VTH2	177 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	NUDT10	Q8NFP7	164 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	HIST1H2BH	Q93079	126 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	BORCS7	Q96B45	105 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	ANAPC16	Q96DE5	110 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	NUDT11	Q96G61	164 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	SFRP2	Q96HF1	295 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	BTF3L4	Q96K17	158 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	HIST1H2BN	Q99877	126 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	HIST1H2BM	Q99879	126 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	PRADC1	Q9BSG0	188 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	HHLA3	Q9XRX5	114 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	ICOS	Q9Y6W8	199 aa		4.36	□□□□□ -1.71
RPE-215	ENST00000453724	GRIFIN	A4D1Z8	144 aa		4.35	□□□□□ -1.71
RPE-215	ENST00000453724		M0R381	172 aa		4.35	□□□□□ -1.71
RPE-215	ENST00000453724	SMIM17	P0DL12	118 aa		4.35	□□□□□ -1.71
RPE-215	ENST00000453724	FOXA3	P55318	350 aa	Predicted RBP	4.35	□□□□□ -1.71
RPE-215	ENST00000453724	CCL18	P55774	89 aa		4.35	□□□□□ -1.71
RPE-215	ENST00000453724	RPL23	P62829	140 aa	Known RBP	4.35	□□□□□ -1.71
RPE-215	ENST00000453724	RPL19	P84098	196 aa	Known RBP	4.35	□□□□□ -1.71
RPE-215	ENST00000453724	FHL2	Q14192	279 aa		4.35	□□□□□ -1.71
RPE-215	ENST00000453724	ADIRF	Q15847	76 aa		4.35	□□□□□ -1.71
RPE-215	ENST00000453724	MRPL23	Q16540	153 aa	Known RBP	4.35	□□□□□ -1.71
RPE-215	ENST00000453724	DMRTA1	Q5VZB9	504 aa		4.35	□□□□□ -1.71
RPE-215	ENST00000453724	ZNF575	Q86XF7	245 aa		4.35	□□□□□ -1.71
RPE-215	ENST00000453724	HIST3H2BB	Q8N257	126 aa		4.35	□□□□□ -1.71
RPE-215	ENST00000453724	POM121L12	Q8N7R1	296 aa		4.35	□□□□□ -1.71
RPE-215	ENST00000453724	OR10D4P	Q8NGN7	298 aa		4.35	□□□□□ -1.71
RPE-215	ENST00000453724	TSKU	Q8WUA8	353 aa		4.35	□□□□□ -1.71
RPE-215	ENST00000453724	ZNF479	Q96JC4	524 aa		4.35	□□□□□ -1.71
RPE-215	ENST00000453724	RNASE7	Q9H1E1	156 aa	Known RBP	4.35	□□□□□ -1.71
RPE-215	ENST00000453724	KIAA1109	Q2LD37	5005 aa		4.34	□□□□□ -1.71
RPE-215	ENST00000453724	TRBV10-1	A0A0K0K1A3	114 aa		4.34	□□□□□ -1.71
RPE-215	ENST00000453724		H7C1H1	209 aa		4.34	□□□□□ -1.71
RPE-215	ENST00000453724		K7EQD1	137 aa		4.34	□□□□□ -1.71
RPE-215	ENST00000453724	NUDT3	O95989	172 aa		4.34	□□□□□ -1.71
RPE-215	ENST00000453724	IGHV3-53	P01767	116 aa		4.34	□□□□□ -1.71
RPE-215	ENST00000453724	SRI	P30626	198 aa		4.34	□□□□□ -1.71
RPE-215	ENST00000453724	TIRAP	P58753	221 aa		4.34	□□□□□ -1.71
RPE-215	ENST00000453724	RAB4B	P61018	213 aa		4.34	□□□□□ -1.71
RPE-215	ENST00000453724	PYY3	Q5JQD4	70 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms