RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 TWIST1Q15672 202 aa11.91□□□□□ -0.5
SNX17-204ENST00000453453 SAMD13Q5VXD3 122 aa11.91□□□□□ -0.5
SNX17-204ENST00000453453 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.91□□□□□ -0.5
SNX17-204ENST00000453453 FOXI2Q6ZQN5 318 aa11.91□□□□□ -0.5
SNX17-204ENST00000453453 PHLDA1Q8WV24 401 aaPredicted RBP11.91□□□□□ -0.5
SNX17-204ENST00000453453 DPM2O94777 84 aa11.9□□□□□ -0.5
SNX17-204ENST00000453453 EDN2P20800 178 aa11.9□□□□□ -0.5
SNX17-204ENST00000453453 C3orf56Q8N813 242 aa11.9□□□□□ -0.5
SNX17-204ENST00000453453 E9PLD3 99 aa11.89□□□□□ -0.51
SNX17-204ENST00000453453 Q8N8P6 123 aa11.89□□□□□ -0.51
SNX17-204ENST00000453453 RAB37Q96AX2 223 aa11.89□□□□□ -0.51
SNX17-204ENST00000453453 RNF185Q96GF1 192 aa11.89□□□□□ -0.51
SNX17-204ENST00000453453 DKK2Q9UBU2 259 aa11.89□□□□□ -0.51
SNX17-204ENST00000453453 HHLA3Q9XRX5 114 aa11.89□□□□□ -0.51
SNX17-204ENST00000453453 RBAKDNA6NC62 111 aa11.89□□□□□ -0.51
SNX17-204ENST00000453453 M0R3E3 92 aa11.89□□□□□ -0.51
SNX17-204ENST00000453453 CEND1Q8N111 149 aa11.89□□□□□ -0.51
SNX17-204ENST00000453453 C16orf92Q96LL3 132 aa11.89□□□□□ -0.51
SNX17-204ENST00000453453 GCSHP23434 173 aa11.88□□□□□ -0.51
SNX17-204ENST00000453453 ATRQ13535 2644 aa11.88□□□□□ -0.51
SNX17-204ENST00000453453 WNK1Q9H4A3 2382 aa11.88□□□□□ -0.51
SNX17-204ENST00000453453 IGKV3-7A0A075B6H7 116 aa11.87□□□□□ -0.51
SNX17-204ENST00000453453 ID1P41134 155 aa11.87□□□□□ -0.51
SNX17-204ENST00000453453 LEPP41159 167 aa11.87□□□□□ -0.51
SNX17-204ENST00000453453 FXYD2P54710 66 aa11.87□□□□□ -0.51
SNX17-204ENST00000453453 TRBV25-1A0A075B6N4 114 aa11.86□□□□□ -0.51
SNX17-204ENST00000453453 FABP5P3A8MUU1 101 aa11.86□□□□□ -0.51
SNX17-204ENST00000453453 TNFRSF6BO95407 300 aa11.86□□□□□ -0.51
SNX17-204ENST00000453453 SHISA2Q6UWI4 295 aa11.86□□□□□ -0.51
SNX17-204ENST00000453453 LINC00482Q8N8I6 264 aa11.86□□□□□ -0.51
SNX17-204ENST00000453453 SIGMAR1Q99720 223 aa11.86□□□□□ -0.51
SNX17-204ENST00000453453 CD300EQ496F6 205 aaPredicted RBP11.86□□□□□ -0.51
SNX17-204ENST00000453453 ASCL2Q99929 193 aa11.86□□□□□ -0.51
SNX17-204ENST00000453453 SPATA25Q9BR10 227 aa11.86□□□□□ -0.51
SNX17-204ENST00000453453 SELENOKQ9Y6D0 94 aa11.86□□□□□ -0.51
SNX17-204ENST00000453453 TMSB15BA0A087X1C1 80 aa11.85□□□□□ -0.51
SNX17-204ENST00000453453 TEX48A0A1B0GUV7 120 aa11.85□□□□□ -0.51
SNX17-204ENST00000453453 NAA38Q9BRA0 125 aaKnown RBP11.85□□□□□ -0.51
SNX17-204ENST00000453453 IGLV2-18A0A075B6J9 118 aa11.84□□□□□ -0.51
SNX17-204ENST00000453453 IGKV2-40A0A087WW87 121 aaPredicted RBP11.84□□□□□ -0.51
SNX17-204ENST00000453453 TRAV25A0A0B4J276 109 aa11.84□□□□□ -0.51
SNX17-204ENST00000453453 A0A1B0GWB2 263 aa11.84□□□□□ -0.51
SNX17-204ENST00000453453 IGLL5B9A064 214 aa11.84□□□□□ -0.51
SNX17-204ENST00000453453 SMKR1H3BMG3 65 aa11.84□□□□□ -0.51
SNX17-204ENST00000453453 IGKV2D-40P01614 121 aaPredicted RBP11.84□□□□□ -0.51
SNX17-204ENST00000453453 PRSS1P07477 247 aa11.84□□□□□ -0.51
SNX17-204ENST00000453453 PLNP26678 52 aa11.84□□□□□ -0.51
SNX17-204ENST00000453453 RPL24P83731 157 aaKnown RBP11.84□□□□□ -0.51
SNX17-204ENST00000453453 DEFB114Q30KQ6 69 aa11.84□□□□□ -0.51
SNX17-204ENST00000453453 MRPL53Q96EL3 112 aaKnown RBP11.84□□□□□ -0.51
SNX17-204ENST00000453453 SPANXB1Q9NS25 103 aaPredicted RBP11.84□□□□□ -0.51
SNX17-204ENST00000453453 IGKV2D-26A0A0A0MRZ7 120 aa11.83□□□□□ -0.52
SNX17-204ENST00000453453 TRAV12-1A0A0B4J245 112 aa11.83□□□□□ -0.52
SNX17-204ENST00000453453 SNRPD3P62318 126 aaKnown RBP11.83□□□□□ -0.52
SNX17-204ENST00000453453 IGFL4Q6B9Z1 124 aa11.83□□□□□ -0.52
SNX17-204ENST00000453453 WFDC3Q8IUB2 231 aa11.83□□□□□ -0.52
SNX17-204ENST00000453453 RNF182Q8N6D2 247 aa11.83□□□□□ -0.52
SNX17-204ENST00000453453 TRAV2A0A0B4J234 112 aa11.82□□□□□ -0.52
SNX17-204ENST00000453453 TRAV8-2A0A0B4J237 113 aa11.82□□□□□ -0.52
SNX17-204ENST00000453453 SOCS3O14543 225 aa11.82□□□□□ -0.52
SNX17-204ENST00000453453 DCANP1Q8TF63 244 aa11.82□□□□□ -0.52
SNX17-204ENST00000453453 A0A087WX48 190 aa11.82□□□□□ -0.52
SNX17-204ENST00000453453 A0A1B0GV72 72 aa11.82□□□□□ -0.52
SNX17-204ENST00000453453 K7EMI3 77 aa11.82□□□□□ -0.52
SNX17-204ENST00000453453 K7EQG2 157 aa11.82□□□□□ -0.52
SNX17-204ENST00000453453 HLA-DMBP28068 263 aa11.82□□□□□ -0.52
SNX17-204ENST00000453453 ZNF80P51504 273 aaPredicted RBP11.82□□□□□ -0.52
SNX17-204ENST00000453453 ZC2HC1BQ5TFG8 222 aa11.82□□□□□ -0.52
SNX17-204ENST00000453453 TMEM61Q8N0U2 210 aa11.82□□□□□ -0.52
SNX17-204ENST00000453453 ZNF479Q96JC4 524 aa11.82□□□□□ -0.52
SNX17-204ENST00000453453 IGHV4-4A0A075B6R2 117 aa11.81□□□□□ -0.52
SNX17-204ENST00000453453 LAGE3Q14657 143 aa11.81□□□□□ -0.52
SNX17-204ENST00000453453 ZNF575Q86XF7 245 aa11.81□□□□□ -0.52
SNX17-204ENST00000453453 ATP6V0E2Q8NHE4 81 aa11.81□□□□□ -0.52
SNX17-204ENST00000453453 C18orf15Q96N68 181 aa11.81□□□□□ -0.52
SNX17-204ENST00000453453 SPAG8Q99932 426 aaPredicted RBP11.81□□□□□ -0.52
SNX17-204ENST00000453453 NHP2Q9NX24 153 aaKnown RBP11.81□□□□□ -0.52
SNX17-204ENST00000453453 TENM1Q9UKZ4 2725 aa11.81□□□□□ -0.52
SNX17-204ENST00000453453 GAGE12HA6NDE8 117 aa11.8□□□□□ -0.52
SNX17-204ENST00000453453 ORM1P02763 201 aa11.8□□□□□ -0.52
SNX17-204ENST00000453453 FXYD7P58549 80 aa11.8□□□□□ -0.52
SNX17-204ENST00000453453 C12orf74Q32Q52 190 aa11.8□□□□□ -0.52
SNX17-204ENST00000453453 AZU1P20160 251 aa11.79□□□□□ -0.52
SNX17-204ENST00000453453 INSL3P51460 131 aa11.79□□□□□ -0.52
SNX17-204ENST00000453453 RRN3P1Q2M238 152 aa11.79□□□□□ -0.52
SNX17-204ENST00000453453 C9orf66Q5T8R8 295 aa11.79□□□□□ -0.52
SNX17-204ENST00000453453 MRAP2Q96G30 205 aa11.79□□□□□ -0.52
SNX17-204ENST00000453453 TRBV7-3A0A075B6L6 115 aa11.78□□□□□ -0.52
SNX17-204ENST00000453453 IGLV1-51P01701 117 aa11.78□□□□□ -0.52
SNX17-204ENST00000453453 GTSCR1Q86UQ5 136 aa11.78□□□□□ -0.52
SNX17-204ENST00000453453 C20orf173Q96LM9 149 aa11.78□□□□□ -0.52
SNX17-204ENST00000453453 ZNF688P0C7X2 276 aa11.78□□□□□ -0.52
SNX17-204ENST00000453453 NRACQ8N912 160 aa11.78□□□□□ -0.52
SNX17-204ENST00000453453 OR10J6PQ8NGY7 276 aa11.78□□□□□ -0.52
SNX17-204ENST00000453453 H7C1H1 209 aa11.77□□□□□ -0.53
SNX17-204ENST00000453453 Q8TAT8 98 aa11.77□□□□□ -0.53
SNX17-204ENST00000453453 MRPL35Q9NZE8 188 aaKnown RBP11.77□□□□□ -0.53
SNX17-204ENST00000453453 PRAC2D3DTV9 90 aa11.76□□□□□ -0.53
SNX17-204ENST00000453453 F8VRH5 84 aa11.76□□□□□ -0.53
SNX17-204ENST00000453453 K7ERJ3 54 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms