RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 CHCHD7Q9BUK0 85 aa7.17□□□□□ -1.26
USP1-204ENST00000452143 ACTR3CQ9C0K3 210 aaPredicted RBP7.17□□□□□ -1.26
USP1-204ENST00000452143 TNFSF18Q9UNG2 199 aa7.17□□□□□ -1.26
USP1-204ENST00000452143 LRP1Q07954 4544 aaKnown RBP7.17□□□□□ -1.26
USP1-204ENST00000452143 FABP5P3A8MUU1 101 aa7.16□□□□□ -1.26
USP1-204ENST00000452143 DNLZQ5SXM8 178 aa7.16□□□□□ -1.26
USP1-204ENST00000452143 Q86TA4 180 aa7.16□□□□□ -1.26
USP1-204ENST00000452143 NIT1Q86X76 327 aa7.16□□□□□ -1.26
USP1-204ENST00000452143 OR2T35Q8NGX2 323 aa7.16□□□□□ -1.26
USP1-204ENST00000452143 KRTAP4-2Q9BYR5 136 aa7.16□□□□□ -1.26
USP1-204ENST00000452143 ARL2-SNX15V9GYD0 113 aa7.16□□□□□ -1.26
USP1-204ENST00000452143 RBFOX3A6NFN3 312 aa7.15□□□□□ -1.26
USP1-204ENST00000452143 B4DEV8 164 aa7.15□□□□□ -1.26
USP1-204ENST00000452143 H3BVH4 76 aa7.15□□□□□ -1.26
USP1-204ENST00000452143 ELOBQ15370 118 aa7.15□□□□□ -1.26
USP1-204ENST00000452143 ATRAIDQ6UW56 229 aa7.15□□□□□ -1.26
USP1-204ENST00000452143 C14orf178Q8N769 122 aaPredicted RBP7.15□□□□□ -1.26
USP1-204ENST00000452143 OR11H4Q8NGC9 324 aa7.15□□□□□ -1.26
USP1-204ENST00000452143 BAALCQ8WXS3 180 aa7.15□□□□□ -1.26
USP1-204ENST00000452143 CHAC1Q9BUX1 264 aa7.15□□□□□ -1.26
USP1-204ENST00000452143 NKX6-2Q9C056 277 aaPredicted RBP7.15□□□□□ -1.26
USP1-204ENST00000452143 IGKV2D-24A0A075B6R9 120 aa7.14□□□□□ -1.27
USP1-204ENST00000452143 A0A087WX48 190 aa7.14□□□□□ -1.27
USP1-204ENST00000452143 RNF222A6NCQ9 220 aa7.14□□□□□ -1.27
USP1-204ENST00000452143 PEX7O00628 323 aa7.14□□□□□ -1.27
USP1-204ENST00000452143 IFNA7P01567 189 aa7.14□□□□□ -1.27
USP1-204ENST00000452143 COX8CQ7Z4L0 72 aa7.14□□□□□ -1.27
USP1-204ENST00000452143 HIST1H2BAQ96A08 127 aa7.14□□□□□ -1.27
USP1-204ENST00000452143 SAMD10Q9BYL1 202 aa7.14□□□□□ -1.27
USP1-204ENST00000452143 JPT2Q9H910 190 aa7.14□□□□□ -1.27
USP1-204ENST00000452143 Q9UF83 564 aa7.14□□□□□ -1.27
USP1-204ENST00000452143 FAT3Q8TDW7 4589 aa7.13□□□□□ -1.27
USP1-204ENST00000452143 UBR4Q5T4S7 5183 aa7.13□□□□□ -1.27
USP1-204ENST00000452143 TRAV34A0A0B4J273 112 aa7.13□□□□□ -1.27
USP1-204ENST00000452143 TRBV10-1A0A0K0K1A3 114 aa7.13□□□□□ -1.27
USP1-204ENST00000452143 CTXND1A0A1B0GTU2 59 aa7.13□□□□□ -1.27
USP1-204ENST00000452143 KRBOX1C9JBD0 128 aa7.13□□□□□ -1.27
USP1-204ENST00000452143 LINC01620Q4KN68 170 aa7.13□□□□□ -1.27
USP1-204ENST00000452143 C14orf177Q52M58 125 aa7.13□□□□□ -1.27
USP1-204ENST00000452143 SERTAD4-AS1Q5TG53 156 aa7.13□□□□□ -1.27
USP1-204ENST00000452143 FAM74A4Q5TZK3 123 aa7.13□□□□□ -1.27
USP1-204ENST00000452143 KCNIP4Q6PIL6 250 aa7.13□□□□□ -1.27
USP1-204ENST00000452143 SFRP2Q96HF1 295 aa7.13□□□□□ -1.27
USP1-204ENST00000452143 KLK12Q9UKR0 248 aa7.13□□□□□ -1.27
USP1-204ENST00000452143 ZFP30Q9Y2G7 519 aa7.13□□□□□ -1.27
USP1-204ENST00000452143 PHLDA3Q9Y5J5 127 aa7.13□□□□□ -1.27
USP1-204ENST00000452143 GHRHP01286 108 aa7.12□□□□□ -1.27
USP1-204ENST00000452143 ARMS2P0C7Q2 107 aa7.12□□□□□ -1.27
USP1-204ENST00000452143 TPT1P13693 172 aaKnown RBP7.12□□□□□ -1.27
USP1-204ENST00000452143 KRTAP10-4P60372 401 aaPredicted RBP7.12□□□□□ -1.27
USP1-204ENST00000452143 RPL36AP83881 106 aaKnown RBP7.12□□□□□ -1.27
USP1-204ENST00000452143 Q0VG73 95 aa7.12□□□□□ -1.27
USP1-204ENST00000452143 FAM162BQ5T6X4 162 aa7.12□□□□□ -1.27
USP1-204ENST00000452143 ZFP82Q8N141 532 aa7.12□□□□□ -1.27
USP1-204ENST00000452143 RPL36ALQ969Q0 106 aaKnown RBP7.12□□□□□ -1.27
USP1-204ENST00000452143 UBE2WQ96B02 151 aa7.12□□□□□ -1.27
USP1-204ENST00000452143 ZC2HC1AQ96GY0 325 aa7.12□□□□□ -1.27
USP1-204ENST00000452143 FMC1Q96HJ9 113 aa7.12□□□□□ -1.27
USP1-204ENST00000452143 TCEAL7Q9BRU2 100 aa7.12□□□□□ -1.27
USP1-204ENST00000452143 ALG5Q9Y673 324 aa7.12□□□□□ -1.27
USP1-204ENST00000452143 TRBV7-3A0A075B6L6 115 aa7.11□□□□□ -1.27
USP1-204ENST00000452143 A0A087WWL8 130 aa7.11□□□□□ -1.27
USP1-204ENST00000452143 BORCS7-ASMTA0A0B4J1R7 106 aa7.11□□□□□ -1.27
USP1-204ENST00000452143 A6NHS1 94 aa7.11□□□□□ -1.27
USP1-204ENST00000452143 FAM74A7A6NL05 159 aa7.11□□□□□ -1.27
USP1-204ENST00000452143 M0R036 132 aa7.11□□□□□ -1.27
USP1-204ENST00000452143 M0R381 172 aa7.11□□□□□ -1.27
USP1-204ENST00000452143 SH2D1AO60880 128 aa7.11□□□□□ -1.27
USP1-204ENST00000452143 OXTP01178 125 aa7.11□□□□□ -1.27
USP1-204ENST00000452143 IGLV2-8P01709 118 aa7.11□□□□□ -1.27
USP1-204ENST00000452143 CRIP1P50238 77 aa7.11□□□□□ -1.27
USP1-204ENST00000452143 ZNF726P1Q15940 193 aa7.11□□□□□ -1.27
USP1-204ENST00000452143 INO80EQ8NBZ0 244 aaPredicted RBP7.11□□□□□ -1.27
USP1-204ENST00000452143 CIRBP-AS1Q8TBR5 109 aa7.11□□□□□ -1.27
USP1-204ENST00000452143 C1orf43Q9BWL3 253 aa7.11□□□□□ -1.27
USP1-204ENST00000452143 TRBV6-1A0A0K0K1D8 114 aa7.1□□□□□ -1.27
USP1-204ENST00000452143 UBE2G2P60604 165 aa7.1□□□□□ -1.27
USP1-204ENST00000452143 UBE2D3P61077 147 aa7.1□□□□□ -1.27
USP1-204ENST00000452143 UBE2G1P62253 170 aa7.1□□□□□ -1.27
USP1-204ENST00000452143 UBE2D2P62837 147 aa7.1□□□□□ -1.27
USP1-204ENST00000452143 ZNF674Q2M3X9 581 aa7.1□□□□□ -1.27
USP1-204ENST00000452143 RPL7L1Q6DKI1 246 aaKnown RBP7.1□□□□□ -1.27
USP1-204ENST00000452143 OR10G8Q8NGN5 311 aa7.1□□□□□ -1.27
USP1-204ENST00000452143 DNAJC30Q96LL9 226 aa7.1□□□□□ -1.27
USP1-204ENST00000452143 SSBP4Q9BWG4 385 aaPredicted RBP7.1□□□□□ -1.27
USP1-204ENST00000452143 MED28Q9H204 178 aa7.1□□□□□ -1.27
USP1-204ENST00000452143 PKHD1L1Q86WI1 4243 aa7.09□□□□□ -1.27
USP1-204ENST00000452143 TRBV6-8A0A0A6YYG3 113 aa7.09□□□□□ -1.27
USP1-204ENST00000452143 GRIFINA4D1Z8 144 aa7.09□□□□□ -1.27
USP1-204ENST00000452143 PTTG1O95997 202 aa7.09□□□□□ -1.27
USP1-204ENST00000452143 CRPP02741 224 aa7.09□□□□□ -1.27
USP1-204ENST00000452143 GIPP09681 153 aaPredicted RBP7.09□□□□□ -1.27
USP1-204ENST00000452143 PKIAP61925 76 aa7.09□□□□□ -1.27
USP1-204ENST00000452143 LTAP01374 205 aa7.08□□□□□ -1.28
USP1-204ENST00000452143 FHITP49789 147 aa7.08□□□□□ -1.28
USP1-204ENST00000452143 RAB4BP61018 213 aa7.08□□□□□ -1.28
USP1-204ENST00000452143 AKR1C8PQ5T2L2 129 aa7.08□□□□□ -1.28
USP1-204ENST00000452143 TMSB15BA0A087X1C1 80 aa7.07□□□□□ -1.28
USP1-204ENST00000452143 MAP1LC3B2A6NCE7 125 aa7.07□□□□□ -1.28
USP1-204ENST00000452143 CXCL1P09341 107 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms