RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 PMCHP20382 165 aa6.3□□□□□ -1.4
COL8A1-203ENST00000452013 TCL1AP56279 114 aa6.3□□□□□ -1.4
COL8A1-203ENST00000452013 ZNF415Q09FC8 603 aa6.3□□□□□ -1.4
COL8A1-203ENST00000452013 OR5I1Q13606 314 aa6.3□□□□□ -1.4
COL8A1-203ENST00000452013 TDRG1Q3Y452 100 aa6.3□□□□□ -1.4
COL8A1-203ENST00000452013 SPXQ9BT56 116 aa6.3□□□□□ -1.4
COL8A1-203ENST00000452013 MLST8Q9BVC4 326 aa6.3□□□□□ -1.4
COL8A1-203ENST00000452013 TP53TG3Q9ULZ0 132 aa6.3□□□□□ -1.4
COL8A1-203ENST00000452013 APLNQ9ULZ1 77 aa6.3□□□□□ -1.4
COL8A1-203ENST00000452013 TENM3Q9P273 2699 aa6.29□□□□□ -1.4
COL8A1-203ENST00000452013 TRGV2A0A075B6R0 118 aa6.29□□□□□ -1.4
COL8A1-203ENST00000452013 F5H768 121 aa6.29□□□□□ -1.4
COL8A1-203ENST00000452013 M0R143 59 aa6.29□□□□□ -1.4
COL8A1-203ENST00000452013 SERF1AO75920 110 aa6.29□□□□□ -1.4
COL8A1-203ENST00000452013 LY6G6CO95867 125 aa6.29□□□□□ -1.4
COL8A1-203ENST00000452013 LTAP01374 205 aa6.29□□□□□ -1.4
COL8A1-203ENST00000452013 PMCHL1Q16048 86 aa6.29□□□□□ -1.4
COL8A1-203ENST00000452013 LGALS9BQ3B8N2 356 aa6.29□□□□□ -1.4
COL8A1-203ENST00000452013 LGALS9CQ6DKI2 356 aa6.29□□□□□ -1.4
COL8A1-203ENST00000452013 CDPF1Q6NVV7 123 aa6.29□□□□□ -1.4
COL8A1-203ENST00000452013 Q6ZQT7 251 aa6.29□□□□□ -1.4
COL8A1-203ENST00000452013 LINC00612Q8N6U2 182 aa6.29□□□□□ -1.4
COL8A1-203ENST00000452013 C11orf72Q8NBR9 251 aa6.29□□□□□ -1.4
COL8A1-203ENST00000452013 DAZAP1Q96EP5 407 aaKnown RBP6.29□□□□□ -1.4
COL8A1-203ENST00000452013 C8orf49Q96NF6 230 aa6.29□□□□□ -1.4
COL8A1-203ENST00000452013 STAB2Q8WWQ8 2551 aa6.29□□□□□ -1.4
COL8A1-203ENST00000452013 TRGV1A0A0A0MS02 117 aa6.28□□□□□ -1.4
COL8A1-203ENST00000452013 GNRH2O43555 120 aa6.28□□□□□ -1.4
COL8A1-203ENST00000452013 SPINK4O60575 86 aa6.28□□□□□ -1.4
COL8A1-203ENST00000452013 ZNF80P51504 273 aaPredicted RBP6.28□□□□□ -1.4
COL8A1-203ENST00000452013 FOXA3P55318 350 aaPredicted RBP6.28□□□□□ -1.4
COL8A1-203ENST00000452013 Q6ZTI0 123 aa6.28□□□□□ -1.4
COL8A1-203ENST00000452013 COX8CQ7Z4L0 72 aa6.28□□□□□ -1.4
COL8A1-203ENST00000452013 NUDT10Q8NFP7 164 aa6.28□□□□□ -1.4
COL8A1-203ENST00000452013 BORCS7Q96B45 105 aa6.28□□□□□ -1.4
COL8A1-203ENST00000452013 NUDT11Q96G61 164 aa6.28□□□□□ -1.4
COL8A1-203ENST00000452013 C18orf15Q96N68 181 aa6.28□□□□□ -1.4
COL8A1-203ENST00000452013 MIEN1Q9BRT3 115 aa6.28□□□□□ -1.4
COL8A1-203ENST00000452013 VAMP8Q9BV40 100 aa6.28□□□□□ -1.4
COL8A1-203ENST00000452013 RNASE7Q9H1E1 156 aaKnown RBP6.28□□□□□ -1.4
COL8A1-203ENST00000452013 RPP21Q9H633 154 aaKnown RBP6.28□□□□□ -1.4
COL8A1-203ENST00000452013 MDFICQ9P1T7 246 aa6.28□□□□□ -1.4
COL8A1-203ENST00000452013 AGRNO00468 2067 aa6.27□□□□□ -1.41
COL8A1-203ENST00000452013 A0A1B0GXF2 115 aa6.27□□□□□ -1.41
COL8A1-203ENST00000452013 C19orf71A6NCJ1 209 aa6.27□□□□□ -1.41
COL8A1-203ENST00000452013 P01737 135 aa6.27□□□□□ -1.41
COL8A1-203ENST00000452013 OR5AL1P0C617 328 aa6.27□□□□□ -1.41
COL8A1-203ENST00000452013 HBBP68871 147 aa6.27□□□□□ -1.41
COL8A1-203ENST00000452013 Q86TA4 180 aa6.27□□□□□ -1.41
COL8A1-203ENST00000452013 C15orf53Q8NAA6 179 aa6.27□□□□□ -1.41
COL8A1-203ENST00000452013 NHLRC2Q8NBF2 726 aa6.27□□□□□ -1.41
COL8A1-203ENST00000452013 NUP35Q8NFH5 326 aa6.27□□□□□ -1.41
COL8A1-203ENST00000452013 LINC00476Q8WZB0 136 aa6.27□□□□□ -1.41
COL8A1-203ENST00000452013 CHCHD1Q96BP2 118 aaKnown RBP6.27□□□□□ -1.41
COL8A1-203ENST00000452013 PRO1933Q9H354 126 aa6.27□□□□□ -1.41
COL8A1-203ENST00000452013 IGHV3-16A0A0C4DH30 117 aa6.26□□□□□ -1.41
COL8A1-203ENST00000452013 GRIFINA4D1Z8 144 aa6.26□□□□□ -1.41
COL8A1-203ENST00000452013 M0R2P5 195 aa6.26□□□□□ -1.41
COL8A1-203ENST00000452013 ORM1P02763 201 aa6.26□□□□□ -1.41
COL8A1-203ENST00000452013 P0DMU3 169 aa6.26□□□□□ -1.41
COL8A1-203ENST00000452013 FAM231AP0DMU4 169 aa6.26□□□□□ -1.41
COL8A1-203ENST00000452013 FAM231CP0DMU5 169 aa6.26□□□□□ -1.41
COL8A1-203ENST00000452013 SRIP30626 198 aa6.26□□□□□ -1.41
COL8A1-203ENST00000452013 AMTP48728 403 aa6.26□□□□□ -1.41
COL8A1-203ENST00000452013 LINC00310P59036 64 aa6.26□□□□□ -1.41
COL8A1-203ENST00000452013 SLAQ13239 276 aa6.26□□□□□ -1.41
COL8A1-203ENST00000452013 GATD1Q8NB37 220 aa6.26□□□□□ -1.41
COL8A1-203ENST00000452013 RASL10AQ92737 203 aa6.26□□□□□ -1.41
COL8A1-203ENST00000452013 HIGD1CA8MV81 97 aa6.25□□□□□ -1.41
COL8A1-203ENST00000452013 HSBP1O75506 76 aa6.25□□□□□ -1.41
COL8A1-203ENST00000452013 S100A4P26447 101 aaKnown RBP6.25□□□□□ -1.41
COL8A1-203ENST00000452013 CRIP1P50238 77 aa6.25□□□□□ -1.41
COL8A1-203ENST00000452013 MRPL54Q6P161 138 aaKnown RBP6.25□□□□□ -1.41
COL8A1-203ENST00000452013 C18orf32Q8TCD1 76 aa6.25□□□□□ -1.41
COL8A1-203ENST00000452013 ZC2HC1AQ96GY0 325 aa6.25□□□□□ -1.41
COL8A1-203ENST00000452013 MRPL16Q9NX20 251 aaKnown RBP6.25□□□□□ -1.41
COL8A1-203ENST00000452013 C11orf21Q9P2W6 132 aa6.25□□□□□ -1.41
COL8A1-203ENST00000452013 UQCR10Q9UDW1 63 aa6.25□□□□□ -1.41
COL8A1-203ENST00000452013 IGKV3D-20A0A0C4DH25 116 aa6.24□□□□□ -1.41
COL8A1-203ENST00000452013 H3BNG1 76 aa6.24□□□□□ -1.41
COL8A1-203ENST00000452013 NUPR1O60356 82 aa6.24□□□□□ -1.41
COL8A1-203ENST00000452013 CIDEAO60543 219 aa6.24□□□□□ -1.41
COL8A1-203ENST00000452013 SH2D1AO60880 128 aa6.24□□□□□ -1.41
COL8A1-203ENST00000452013 NUDT3O95989 172 aa6.24□□□□□ -1.41
COL8A1-203ENST00000452013 ASIPP42127 132 aa6.24□□□□□ -1.41
COL8A1-203ENST00000452013 RPS20P60866 119 aaKnown RBP6.24□□□□□ -1.41
COL8A1-203ENST00000452013 RIGQ13278 110 aa6.24□□□□□ -1.41
COL8A1-203ENST00000452013 PTH2Q96A98 100 aa6.24□□□□□ -1.41
COL8A1-203ENST00000452013 ALKBH7Q9BT30 221 aaPredicted RBP6.24□□□□□ -1.41
COL8A1-203ENST00000452013 DNAH7Q8WXX0 4024 aa6.23□□□□□ -1.41
COL8A1-203ENST00000452013 TRAV26-1A0A087WT03 109 aa6.23□□□□□ -1.41
COL8A1-203ENST00000452013 TRGV4A0A0C4DH28 118 aa6.23□□□□□ -1.41
COL8A1-203ENST00000452013 IGHV3-53P01767 116 aa6.23□□□□□ -1.41
COL8A1-203ENST00000452013 BTF3P20290 206 aaKnown RBP6.23□□□□□ -1.41
COL8A1-203ENST00000452013 ZNF876PQ49A33 203 aa6.23□□□□□ -1.41
COL8A1-203ENST00000452013 UBE2DNLQ8IWF7 75 aa6.23□□□□□ -1.41
COL8A1-203ENST00000452013 POM121L12Q8N7R1 296 aa6.23□□□□□ -1.41
COL8A1-203ENST00000452013 OR4C5Q8NGB2 326 aa6.23□□□□□ -1.41
COL8A1-203ENST00000452013 PRO0255Q9UI72 69 aa6.23□□□□□ -1.41
COL8A1-203ENST00000452013 HHLA3Q9XRX5 114 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms