RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 Q6ZS46 218 aa8.55□□□□□ -1.04
SYVN1-204ENST00000449943 IGLL5B9A064 214 aa8.55□□□□□ -1.04
SYVN1-204ENST00000449943 VPS13CQ709C8 3753 aa8.55□□□□□ -1.04
SYVN1-204ENST00000449943 PRSS47A8MTI9 375 aa8.55□□□□□ -1.04
SYVN1-204ENST00000449943 IGHV4-59P01825 116 aa8.55□□□□□ -1.04
SYVN1-204ENST00000449943 HLA-DRB4P13762 266 aa8.55□□□□□ -1.04
SYVN1-204ENST00000449943 TOMM6Q96B49 74 aa8.55□□□□□ -1.04
SYVN1-204ENST00000449943 HLA-DRB4X5D2U9 266 aa8.55□□□□□ -1.04
SYVN1-204ENST00000449943 ZFYVE26Q68DK2 2539 aa8.54□□□□□ -1.04
SYVN1-204ENST00000449943 H3BMG7 143 aa8.54□□□□□ -1.04
SYVN1-204ENST00000449943 JPT2Q9H910 190 aa8.54□□□□□ -1.04
SYVN1-204ENST00000449943 LENEPQ9Y5L5 61 aa8.54□□□□□ -1.04
SYVN1-204ENST00000449943 MYMXA0A1B0GTQ4 84 aa8.54□□□□□ -1.04
SYVN1-204ENST00000449943 BAALCQ8WXS3 180 aa8.54□□□□□ -1.04
SYVN1-204ENST00000449943 A0A087WWL8 130 aa8.53□□□□□ -1.04
SYVN1-204ENST00000449943 PRSS29PA6NIE9 313 aa8.53□□□□□ -1.04
SYVN1-204ENST00000449943 SOCS3O14543 225 aa8.53□□□□□ -1.04
SYVN1-204ENST00000449943 SFTA2Q6UW10 78 aa8.53□□□□□ -1.04
SYVN1-204ENST00000449943 TRAV12-3A0A0B4J271 114 aa8.53□□□□□ -1.04
SYVN1-204ENST00000449943 HOXA3O43365 443 aaPredicted RBP8.53□□□□□ -1.04
SYVN1-204ENST00000449943 C19orf54Q5BKX5 351 aa8.53□□□□□ -1.04
SYVN1-204ENST00000449943 NEXN-AS1Q8NBZ9 246 aa8.53□□□□□ -1.04
SYVN1-204ENST00000449943 PRADC1Q9BSG0 188 aa8.53□□□□□ -1.04
SYVN1-204ENST00000449943 ZNF256Q9Y2P7 627 aaPredicted RBP8.53□□□□□ -1.04
SYVN1-204ENST00000449943 TRGV2A0A075B6R0 118 aa8.53□□□□□ -1.04
SYVN1-204ENST00000449943 TRAV12-1A0A0B4J245 112 aa8.53□□□□□ -1.04
SYVN1-204ENST00000449943 LINC01549A6NIU2 74 aa8.53□□□□□ -1.04
SYVN1-204ENST00000449943 LINC01619G3V211 115 aa8.53□□□□□ -1.04
SYVN1-204ENST00000449943 SNCGO76070 127 aa8.53□□□□□ -1.04
SYVN1-204ENST00000449943 CD300EQ496F6 205 aaPredicted RBP8.53□□□□□ -1.04
SYVN1-204ENST00000449943 TMEM238LA0A1B0GVL6 79 aa8.53□□□□□ -1.04
SYVN1-204ENST00000449943 A6NJY4 79 aa8.53□□□□□ -1.04
SYVN1-204ENST00000449943 WFDC2Q14508 124 aa8.53□□□□□ -1.04
SYVN1-204ENST00000449943 COL12A1Q99715 3063 aa8.53□□□□□ -1.04
SYVN1-204ENST00000449943 C20orf78Q9BR46 151 aa8.53□□□□□ -1.04
SYVN1-204ENST00000449943 JMJD1CQ15652 2540 aa8.53□□□□□ -1.04
SYVN1-204ENST00000449943 ZNF815PA8K554 130 aa8.52□□□□□ -1.04
SYVN1-204ENST00000449943 RNASE3P12724 160 aaKnown RBP8.52□□□□□ -1.04
SYVN1-204ENST00000449943 TMEM95Q3KNT9 176 aa8.52□□□□□ -1.04
SYVN1-204ENST00000449943 NRGNQ92686 78 aa8.52□□□□□ -1.04
SYVN1-204ENST00000449943 GEMIN7Q9H840 131 aaKnown RBP8.52□□□□□ -1.04
SYVN1-204ENST00000449943 E9PLD3 99 aa8.52□□□□□ -1.05
SYVN1-204ENST00000449943 AGRNO00468 2067 aa8.52□□□□□ -1.05
SYVN1-204ENST00000449943 FASNP49327 2511 aaKnown RBP8.52□□□□□ -1.05
SYVN1-204ENST00000449943 LGALS1P09382 135 aaKnown RBP8.52□□□□□ -1.05
SYVN1-204ENST00000449943 LGALS3P17931 250 aaKnown RBP8.51□□□□□ -1.05
SYVN1-204ENST00000449943 TP53TG1Q9Y2A0 90 aa8.51□□□□□ -1.05
SYVN1-204ENST00000449943 DEFB131AP59861 70 aa8.51□□□□□ -1.05
SYVN1-204ENST00000449943 FOXI2Q6ZQN5 318 aa8.51□□□□□ -1.05
SYVN1-204ENST00000449943 SH2D6Q7Z4S9 175 aa8.51□□□□□ -1.05
SYVN1-204ENST00000449943 TRBV7-3A0A075B6L6 115 aa8.51□□□□□ -1.05
SYVN1-204ENST00000449943 TAL2Q16559 108 aa8.51□□□□□ -1.05
SYVN1-204ENST00000449943 ATP6V0BQ99437 205 aa8.51□□□□□ -1.05
SYVN1-204ENST00000449943 TCTEX1D4Q5JR98 221 aa8.5□□□□□ -1.05
SYVN1-204ENST00000449943 TMEM170BQ5T4T1 132 aa8.5□□□□□ -1.05
SYVN1-204ENST00000449943 PLEKHB2Q96CS7 222 aa8.5□□□□□ -1.05
SYVN1-204ENST00000449943 RPL39P62891 51 aaKnown RBP8.5□□□□□ -1.05
SYVN1-204ENST00000449943 ZNF415Q09FC8 603 aa8.5□□□□□ -1.05
SYVN1-204ENST00000449943 ETDBQ3ZM63 59 aa8.5□□□□□ -1.05
SYVN1-204ENST00000449943 MYO9AB2RTY4 2548 aa8.49□□□□□ -1.05
SYVN1-204ENST00000449943 TRAV12-2A0A075B6T6 113 aa8.49□□□□□ -1.05
SYVN1-204ENST00000449943 IGHG2P01859 326 aa8.49□□□□□ -1.05
SYVN1-204ENST00000449943 PSMB2P49721 201 aa8.49□□□□□ -1.05
SYVN1-204ENST00000449943 C1QTNF4Q9BXJ3 329 aa8.49□□□□□ -1.05
SYVN1-204ENST00000449943 MRPL16Q9NX20 251 aaKnown RBP8.49□□□□□ -1.05
SYVN1-204ENST00000449943 PGPEP1Q9NXJ5 209 aa8.49□□□□□ -1.05
SYVN1-204ENST00000449943 INSP01308 110 aa8.49□□□□□ -1.05
SYVN1-204ENST00000449943 SUMO4Q6EEV6 95 aa8.49□□□□□ -1.05
SYVN1-204ENST00000449943 CRIP2P52943 208 aaPredicted RBP8.48□□□□□ -1.05
SYVN1-204ENST00000449943 TMEM101Q96IK0 257 aa8.48□□□□□ -1.05
SYVN1-204ENST00000449943 GTSF1LQ9H1H1 148 aa8.48□□□□□ -1.05
SYVN1-204ENST00000449943 C11orf86A6NJI1 115 aa8.48□□□□□ -1.05
SYVN1-204ENST00000449943 APOMO95445 188 aa8.48□□□□□ -1.05
SYVN1-204ENST00000449943 FAM19A4Q96LR4 140 aa8.48□□□□□ -1.05
SYVN1-204ENST00000449943 A6NDX4 124 aa8.48□□□□□ -1.05
SYVN1-204ENST00000449943 GAGE13Q4V321 117 aa8.48□□□□□ -1.05
SYVN1-204ENST00000449943 LOC107984156A0A0G2JMH3 177 aa8.47□□□□□ -1.05
SYVN1-204ENST00000449943 ARL17AQ8IVW1 177 aa8.47□□□□□ -1.05
SYVN1-204ENST00000449943 VCX2Q9H322 139 aa8.47□□□□□ -1.05
SYVN1-204ENST00000449943 TSSC4Q9Y5U2 329 aaPredicted RBP8.47□□□□□ -1.05
SYVN1-204ENST00000449943 CIRBPQ14011 172 aaKnown RBP8.47□□□□□ -1.05
SYVN1-204ENST00000449943 C10orf99Q6UWK7 81 aa8.47□□□□□ -1.05
SYVN1-204ENST00000449943 ZFP2Q6ZN57 461 aa8.47□□□□□ -1.05
SYVN1-204ENST00000449943 SPANXB1Q9NS25 103 aaPredicted RBP8.47□□□□□ -1.05
SYVN1-204ENST00000449943 F8W1H4 67 aa8.47□□□□□ -1.05
SYVN1-204ENST00000449943 PRSS2P07478 247 aa8.47□□□□□ -1.05
SYVN1-204ENST00000449943 SDHAF1A6NFY7 115 aa8.46□□□□□ -1.05
SYVN1-204ENST00000449943 TMEM238C9JI98 176 aa8.46□□□□□ -1.05
SYVN1-204ENST00000449943 VCYO14598 125 aa8.46□□□□□ -1.05
SYVN1-204ENST00000449943 TSHBP01222 138 aa8.46□□□□□ -1.05
SYVN1-204ENST00000449943 CRYGDP07320 174 aa8.46□□□□□ -1.05
SYVN1-204ENST00000449943 MED14OSP0DP75 135 aa8.46□□□□□ -1.05
SYVN1-204ENST00000449943 A0A1B0GWB2 263 aa8.46□□□□□ -1.06
SYVN1-204ENST00000449943 LINC00315P59091 139 aa8.46□□□□□ -1.06
SYVN1-204ENST00000449943 MUC4Q99102 2169 aa8.46□□□□□ -1.06
SYVN1-204ENST00000449943 TRGV4A0A0C4DH28 118 aa8.46□□□□□ -1.06
SYVN1-204ENST00000449943 SPINK13Q1W4C9 94 aa8.46□□□□□ -1.06
SYVN1-204ENST00000449943 KIF25-AS1Q9Y6Z4 181 aa8.46□□□□□ -1.06
SYVN1-204ENST00000449943 MORN3Q6PF18 240 aaPredicted RBP8.45□□□□□ -1.06
SYVN1-204ENST00000449943 MDFICQ9P1T7 246 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms