RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 NXPH4O95158 308 aa10.78□□□□□ -0.68
ITGB4-202ENST00000449880 SPRNQ5BIV9 151 aa10.78□□□□□ -0.68
ITGB4-202ENST00000449880 IGHV3-38A0A0C4DH36 116 aa10.78□□□□□ -0.68
ITGB4-202ENST00000449880 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.78□□□□□ -0.68
ITGB4-202ENST00000449880 MSRB1Q9NZV6 116 aa10.77□□□□□ -0.68
ITGB4-202ENST00000449880 ZNF503Q96F45 646 aa10.77□□□□□ -0.69
ITGB4-202ENST00000449880 CRYGCP07315 174 aa10.77□□□□□ -0.69
ITGB4-202ENST00000449880 TTTY13Q9BZ97 58 aa10.77□□□□□ -0.69
ITGB4-202ENST00000449880 CRYGBP07316 175 aa10.76□□□□□ -0.69
ITGB4-202ENST00000449880 A0A0J9YXV3 536 aa10.76□□□□□ -0.69
ITGB4-202ENST00000449880 SND1-IT1Q9HBX3 110 aa10.76□□□□□ -0.69
ITGB4-202ENST00000449880 IGKV1OR2-108A0A075B7D4 117 aa10.76□□□□□ -0.69
ITGB4-202ENST00000449880 P0DMU3 169 aa10.76□□□□□ -0.69
ITGB4-202ENST00000449880 FAM231AP0DMU4 169 aa10.76□□□□□ -0.69
ITGB4-202ENST00000449880 FAM231CP0DMU5 169 aa10.76□□□□□ -0.69
ITGB4-202ENST00000449880 DEFB112Q30KQ8 113 aa10.76□□□□□ -0.69
ITGB4-202ENST00000449880 Q8N1Y9 231 aa10.76□□□□□ -0.69
ITGB4-202ENST00000449880 IGLV2-23P01705 113 aa10.76□□□□□ -0.69
ITGB4-202ENST00000449880 ALPK3Q96L96 1907 aa10.76□□□□□ -0.69
ITGB4-202ENST00000449880 PDE6GP18545 87 aa10.75□□□□□ -0.69
ITGB4-202ENST00000449880 C16orf54Q6UWD8 224 aa10.75□□□□□ -0.69
ITGB4-202ENST00000449880 C3orf22Q8N5N4 141 aa10.75□□□□□ -0.69
ITGB4-202ENST00000449880 GDF5OSQ5U4N7 250 aa10.75□□□□□ -0.69
ITGB4-202ENST00000449880 ATP5EP2Q5VTU8 51 aa10.75□□□□□ -0.69
ITGB4-202ENST00000449880 ZNF295-AS1Q8N0V1 137 aa10.75□□□□□ -0.69
ITGB4-202ENST00000449880 MLST8Q9BVC4 326 aa10.75□□□□□ -0.69
ITGB4-202ENST00000449880 IMUPQ9GZP8 106 aa10.75□□□□□ -0.69
ITGB4-202ENST00000449880 IGHV1-58A0A0C4DH39 117 aa10.75□□□□□ -0.69
ITGB4-202ENST00000449880 CCL24O00175 119 aa10.75□□□□□ -0.69
ITGB4-202ENST00000449880 GOLGB1Q14789 3259 aaKnown RBP10.75□□□□□ -0.69
ITGB4-202ENST00000449880 TRAV25A0A0B4J276 109 aa10.75□□□□□ -0.69
ITGB4-202ENST00000449880 IGKV3D-7A0A0C4DH55 119 aa10.75□□□□□ -0.69
ITGB4-202ENST00000449880 YLPM1P49750 1951 aaKnown RBP10.74□□□□□ -0.69
ITGB4-202ENST00000449880 VSIG2Q96IQ7 327 aa10.74□□□□□ -0.69
ITGB4-202ENST00000449880 MDFICQ9P1T7 246 aa10.74□□□□□ -0.69
ITGB4-202ENST00000449880 U3KQK5 164 aa10.74□□□□□ -0.69
ITGB4-202ENST00000449880 PCDH15Q96QU1 1955 aa10.74□□□□□ -0.69
ITGB4-202ENST00000449880 BUB3O43684 328 aa10.74□□□□□ -0.69
ITGB4-202ENST00000449880 DAZ2Q13117 558 aaKnown RBP10.74□□□□□ -0.69
ITGB4-202ENST00000449880 DEFB113Q30KQ7 82 aa10.74□□□□□ -0.69
ITGB4-202ENST00000449880 SEM1Q6ZVN7 128 aa10.74□□□□□ -0.69
ITGB4-202ENST00000449880 DAZ4Q86SG3 579 aaKnown RBP10.74□□□□□ -0.69
ITGB4-202ENST00000449880 DAZ3Q9NR90 486 aaKnown RBP10.74□□□□□ -0.69
ITGB4-202ENST00000449880 MIAQ16674 131 aa10.74□□□□□ -0.69
ITGB4-202ENST00000449880 C9orf66Q5T8R8 295 aa10.74□□□□□ -0.69
ITGB4-202ENST00000449880 TECTAO75443 2155 aa10.74□□□□□ -0.69
ITGB4-202ENST00000449880 IGHV4-59P01825 116 aa10.73□□□□□ -0.69
ITGB4-202ENST00000449880 HOXB4P17483 251 aaPredicted RBP10.73□□□□□ -0.69
ITGB4-202ENST00000449880 UBE2BP63146 152 aa10.73□□□□□ -0.69
ITGB4-202ENST00000449880 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.73□□□□□ -0.69
ITGB4-202ENST00000449880 IGKV2-29A2NJV5 120 aaPredicted RBP10.73□□□□□ -0.69
ITGB4-202ENST00000449880 PTH2Q96A98 100 aa10.73□□□□□ -0.69
ITGB4-202ENST00000449880 OPRPNQ99935 248 aaPredicted RBP10.73□□□□□ -0.69
ITGB4-202ENST00000449880 CTSZQ9UBR2 303 aa10.73□□□□□ -0.69
ITGB4-202ENST00000449880 IGKV2D-24A0A075B6R9 120 aa10.73□□□□□ -0.69
ITGB4-202ENST00000449880 A0A096LPF7 62 aa10.72□□□□□ -0.69
ITGB4-202ENST00000449880 TEX22C9J3V5 150 aa10.72□□□□□ -0.69
ITGB4-202ENST00000449880 CTSGP08311 255 aa10.72□□□□□ -0.69
ITGB4-202ENST00000449880 RNASE13Q5GAN3 156 aaKnown RBP10.72□□□□□ -0.69
ITGB4-202ENST00000449880 COX7B2Q8TF08 81 aa10.72□□□□□ -0.69
ITGB4-202ENST00000449880 NUP210LQ5VU65 1888 aa10.72□□□□□ -0.69
ITGB4-202ENST00000449880 RS1O15537 224 aa10.72□□□□□ -0.69
ITGB4-202ENST00000449880 GRNP28799 593 aaKnown RBP10.71□□□□□ -0.69
ITGB4-202ENST00000449880 NOP10Q9NPE3 64 aaKnown RBP10.71□□□□□ -0.69
ITGB4-202ENST00000449880 WISP2O76076 250 aa10.71□□□□□ -0.69
ITGB4-202ENST00000449880 IGLC6P0CF74 106 aa10.71□□□□□ -0.69
ITGB4-202ENST00000449880 FUSP35637 526 aaKnown RBP eCLIP10.71□□□□□ -0.7
ITGB4-202ENST00000449880 TMEM61Q8N0U2 210 aa10.71□□□□□ -0.7
ITGB4-202ENST00000449880 CLEC2BQ92478 149 aa10.71□□□□□ -0.7
ITGB4-202ENST00000449880 U3KQE9 123 aa10.71□□□□□ -0.7
ITGB4-202ENST00000449880 TMEM256-PLSCR3K7ERE1 68 aa10.7□□□□□ -0.7
ITGB4-202ENST00000449880 CENPVL3A0A0U1RRI6 287 aa10.7□□□□□ -0.7
ITGB4-202ENST00000449880 COX7A2LO14548 114 aa10.7□□□□□ -0.7
ITGB4-202ENST00000449880 IGKV1D-37A0A075B6S9 117 aa10.7□□□□□ -0.7
ITGB4-202ENST00000449880 NEXN-AS1Q8NBZ9 246 aa10.7□□□□□ -0.7
ITGB4-202ENST00000449880 PCNX2A6NKB5 2137 aa10.7□□□□□ -0.7
ITGB4-202ENST00000449880 LOXL1Q08397 574 aaPredicted RBP10.69□□□□□ -0.7
ITGB4-202ENST00000449880 CHD3Q12873 2000 aaKnown RBP10.69□□□□□ -0.7
ITGB4-202ENST00000449880 EIF4EBP1Q13541 118 aaPredicted RBP10.69□□□□□ -0.7
ITGB4-202ENST00000449880 A0A0J9YY99 117 aa10.69□□□□□ -0.7
ITGB4-202ENST00000449880 TRBV30A0A0K0K1B3 111 aa10.69□□□□□ -0.7
ITGB4-202ENST00000449880 CXCL5P42830 114 aa10.69□□□□□ -0.7
ITGB4-202ENST00000449880 Q6Q795 121 aa10.69□□□□□ -0.7
ITGB4-202ENST00000449880 C2orf91Q6ZV80 131 aa10.69□□□□□ -0.7
ITGB4-202ENST00000449880 K7EQD1 137 aa10.69□□□□□ -0.7
ITGB4-202ENST00000449880 ATP5EP56381 51 aaPredicted RBP10.69□□□□□ -0.7
ITGB4-202ENST00000449880 TRAV4A0A0B4J268 109 aa10.68□□□□□ -0.7
ITGB4-202ENST00000449880 C20orf203Q8NBC4 194 aa10.68□□□□□ -0.7
ITGB4-202ENST00000449880 IGHV7-81A0A0B4J1V7 117 aa10.68□□□□□ -0.7
ITGB4-202ENST00000449880 RPL39P62891 51 aaKnown RBP10.68□□□□□ -0.7
ITGB4-202ENST00000449880 TP73-AS1Q9UF72 201 aa10.68□□□□□ -0.7
ITGB4-202ENST00000449880 LINC00574Q9H8X3 128 aa10.68□□□□□ -0.7
ITGB4-202ENST00000449880 A0A0J9YXY3 114 aa10.67□□□□□ -0.7
ITGB4-202ENST00000449880 CCL18P55774 89 aa10.67□□□□□ -0.7
ITGB4-202ENST00000449880 CLPSL2Q6UWE3 100 aa10.67□□□□□ -0.7
ITGB4-202ENST00000449880 CEP192Q8TEP8 1941 aa10.67□□□□□ -0.7
ITGB4-202ENST00000449880 SPART-AS1P0CW21 52 aa10.67□□□□□ -0.7
ITGB4-202ENST00000449880 MP68P56378 58 aa10.67□□□□□ -0.7
ITGB4-202ENST00000449880 IGHV4-61A0A0C4DH41 118 aa10.67□□□□□ -0.7
ITGB4-202ENST00000449880 XCL1P47992 114 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms