RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 XGP55808 180 aa9.53□□□□□ -0.88
UBE3B-204ENST00000449510 KAAG1Q9UBP8 84 aa9.53□□□□□ -0.88
UBE3B-204ENST00000449510 TRAV13-1A0A0B4J241 112 aa9.52□□□□□ -0.88
UBE3B-204ENST00000449510 GAGE12JA6NER3 117 aa9.52□□□□□ -0.88
UBE3B-204ENST00000449510 GAGE7O76087 117 aa9.52□□□□□ -0.88
UBE3B-204ENST00000449510 GAGE12FP0CL80 117 aa9.52□□□□□ -0.88
UBE3B-204ENST00000449510 GAGE12GP0CL81 117 aa9.52□□□□□ -0.88
UBE3B-204ENST00000449510 GAGE12IP0CL82 117 aa9.52□□□□□ -0.88
UBE3B-204ENST00000449510 GAGE4Q13068 117 aa9.52□□□□□ -0.88
UBE3B-204ENST00000449510 MUSTN1Q8IVN3 82 aa9.52□□□□□ -0.88
UBE3B-204ENST00000449510 TIMM21Q9BVV7 248 aa9.52□□□□□ -0.88
UBE3B-204ENST00000449510 OVOL1O14753 267 aa9.52□□□□□ -0.89
UBE3B-204ENST00000449510 CFC1BP0CG36 223 aa9.52□□□□□ -0.89
UBE3B-204ENST00000449510 CFC1P0CG37 223 aa9.52□□□□□ -0.89
UBE3B-204ENST00000449510 IFITM1P13164 125 aa9.52□□□□□ -0.89
UBE3B-204ENST00000449510 ITLN2Q8WWU7 325 aaPredicted RBP9.52□□□□□ -0.89
UBE3B-204ENST00000449510 SMAD5-AS1Q9Y6J3 95 aa9.52□□□□□ -0.89
UBE3B-204ENST00000449510 CEMP1Q6PRD7 247 aaPredicted RBP9.51□□□□□ -0.89
UBE3B-204ENST00000449510 GATD1Q8NB37 220 aa9.51□□□□□ -0.89
UBE3B-204ENST00000449510 H3BMM0 161 aa9.51□□□□□ -0.89
UBE3B-204ENST00000449510 DNAL4O96015 105 aa9.51□□□□□ -0.89
UBE3B-204ENST00000449510 TRBV12-3P01733 135 aa9.51□□□□□ -0.89
UBE3B-204ENST00000449510 UBE2WQ96B02 151 aa9.51□□□□□ -0.89
UBE3B-204ENST00000449510 C11orf68Q9H3H3 251 aaKnown RBP9.51□□□□□ -0.89
UBE3B-204ENST00000449510 PIP4P2Q8N4L2 257 aa9.5□□□□□ -0.89
UBE3B-204ENST00000449510 TEX49A0A1B0GTD5 131 aa9.5□□□□□ -0.89
UBE3B-204ENST00000449510 C19orf54Q5BKX5 351 aa9.5□□□□□ -0.89
UBE3B-204ENST00000449510 LINC01587Q99440 93 aa9.5□□□□□ -0.89
UBE3B-204ENST00000449510 LINC00574Q9H8X3 128 aa9.5□□□□□ -0.89
UBE3B-204ENST00000449510 UNQ9165/PRO28630Q6UXU0 137 aa9.5□□□□□ -0.89
UBE3B-204ENST00000449510 HOXB4P17483 251 aaPredicted RBP9.49□□□□□ -0.89
UBE3B-204ENST00000449510 C16orf54Q6UWD8 224 aa9.49□□□□□ -0.89
UBE3B-204ENST00000449510 Q6ZS46 218 aa9.49□□□□□ -0.89
UBE3B-204ENST00000449510 NDUFA11Q86Y39 141 aa9.49□□□□□ -0.89
UBE3B-204ENST00000449510 DYNLRB2Q8TF09 96 aa9.49□□□□□ -0.89
UBE3B-204ENST00000449510 EDA2RQ9HAV5 297 aa9.49□□□□□ -0.89
UBE3B-204ENST00000449510 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.49□□□□□ -0.89
UBE3B-204ENST00000449510 FAM110DQ8TAY7 271 aaPredicted RBP9.49□□□□□ -0.89
UBE3B-204ENST00000449510 CLEC2BQ92478 149 aa9.49□□□□□ -0.89
UBE3B-204ENST00000449510 CARD19Q96LW7 228 aa9.49□□□□□ -0.89
UBE3B-204ENST00000449510 NDUFA12Q9UI09 145 aa9.49□□□□□ -0.89
UBE3B-204ENST00000449510 TNRC6BQ9UPQ9 1833 aaKnown RBP9.49□□□□□ -0.89
UBE3B-204ENST00000449510 LRRK2Q5S007 2527 aa9.48□□□□□ -0.89
UBE3B-204ENST00000449510 TRBV7-9A0A0J9YWB2 115 aa9.48□□□□□ -0.89
UBE3B-204ENST00000449510 GATA3P23771 443 aa9.48□□□□□ -0.89
UBE3B-204ENST00000449510 ATP5J2P56134 94 aa9.48□□□□□ -0.89
UBE3B-204ENST00000449510 PRRC2AP48634 2157 aaKnown RBP9.48□□□□□ -0.89
UBE3B-204ENST00000449510 TRBV7-1A0A0A6YYK4 115 aa9.48□□□□□ -0.89
UBE3B-204ENST00000449510 MAPK1IP1LQ8NDC0 245 aa9.48□□□□□ -0.89
UBE3B-204ENST00000449510 RASL10AQ92737 203 aa9.48□□□□□ -0.89
UBE3B-204ENST00000449510 GAGE2AQ6NT46 116 aa9.47□□□□□ -0.89
UBE3B-204ENST00000449510 SUMO4Q6EEV6 95 aa9.47□□□□□ -0.89
UBE3B-204ENST00000449510 PLA2G2CQ5R387 149 aa9.47□□□□□ -0.89
UBE3B-204ENST00000449510 Q8N9W7 124 aa9.47□□□□□ -0.89
UBE3B-204ENST00000449510 U3KQK5 164 aa9.47□□□□□ -0.89
UBE3B-204ENST00000449510 BLCAPP62952 87 aa9.46□□□□□ -0.89
UBE3B-204ENST00000449510 LY6DQ14210 128 aa9.46□□□□□ -0.89
UBE3B-204ENST00000449510 M0R1W7 72 aa9.46□□□□□ -0.89
UBE3B-204ENST00000449510 CRYGBP07316 175 aa9.46□□□□□ -0.89
UBE3B-204ENST00000449510 ZFP36P26651 326 aaKnown RBP9.46□□□□□ -0.89
UBE3B-204ENST00000449510 NFE4Q86UQ8 179 aa9.46□□□□□ -0.89
UBE3B-204ENST00000449510 UBE2E2Q96LR5 201 aa9.46□□□□□ -0.89
UBE3B-204ENST00000449510 MSRB2Q9Y3D2 182 aa9.46□□□□□ -0.89
UBE3B-204ENST00000449510 A8MZ25 164 aa9.46□□□□□ -0.9
UBE3B-204ENST00000449510 HOXD3P31249 432 aaPredicted RBP9.46□□□□□ -0.9
UBE3B-204ENST00000449510 HERV-K104P63124 156 aa9.46□□□□□ -0.9
UBE3B-204ENST00000449510 C8orf31Q8N9H6 132 aa9.46□□□□□ -0.9
UBE3B-204ENST00000449510 COL5A1P20908 1838 aaPredicted RBP9.45□□□□□ -0.9
UBE3B-204ENST00000449510 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.45□□□□□ -0.9
UBE3B-204ENST00000449510 IGKV2-29A2NJV5 120 aaPredicted RBP9.45□□□□□ -0.9
UBE3B-204ENST00000449510 PRR9Q5T870 116 aa9.45□□□□□ -0.9
UBE3B-204ENST00000449510 ZFHX4Q86UP3 3567 aa9.45□□□□□ -0.9
UBE3B-204ENST00000449510 LINC01620Q4KN68 170 aa9.45□□□□□ -0.9
UBE3B-204ENST00000449510 TOMM6Q96B49 74 aa9.45□□□□□ -0.9
UBE3B-204ENST00000449510 A0A1W2PRX2 142 aa9.45□□□□□ -0.9
UBE3B-204ENST00000449510 CRIP2P52943 208 aaPredicted RBP9.45□□□□□ -0.9
UBE3B-204ENST00000449510 MRPL23Q16540 153 aaKnown RBP9.45□□□□□ -0.9
UBE3B-204ENST00000449510 C9orf153Q5TBE3 101 aa9.45□□□□□ -0.9
UBE3B-204ENST00000449510 MINOS1Q5TGZ0 78 aa9.45□□□□□ -0.9
UBE3B-204ENST00000449510 PRIMA1Q86XR5 153 aa9.45□□□□□ -0.9
UBE3B-204ENST00000449510 MDFICQ9P1T7 246 aa9.45□□□□□ -0.9
UBE3B-204ENST00000449510 MOB4Q9Y3A3 225 aa9.45□□□□□ -0.9
UBE3B-204ENST00000449510 MINOS1-NBL1R4GNA1 71 aa9.45□□□□□ -0.9
UBE3B-204ENST00000449510 TRAV4A0A0B4J268 109 aa9.44□□□□□ -0.9
UBE3B-204ENST00000449510 UBE2L6O14933 153 aa9.44□□□□□ -0.9
UBE3B-204ENST00000449510 P0DMU3 169 aa9.44□□□□□ -0.9
UBE3B-204ENST00000449510 FAM231AP0DMU4 169 aa9.44□□□□□ -0.9
UBE3B-204ENST00000449510 FAM231CP0DMU5 169 aa9.44□□□□□ -0.9
UBE3B-204ENST00000449510 IGFL2Q6UWQ7 119 aa9.44□□□□□ -0.9
UBE3B-204ENST00000449510 LY6G5BQ8NDX9 201 aa9.44□□□□□ -0.9
UBE3B-204ENST00000449510 Q8N1Y9 231 aa9.44□□□□□ -0.9
UBE3B-204ENST00000449510 NRACQ8N912 160 aa9.44□□□□□ -0.9
UBE3B-204ENST00000449510 ZZEF1O43149 2961 aa9.44□□□□□ -0.9
UBE3B-204ENST00000449510 HIST1H4AP62805 103 aaKnown RBP9.43□□□□□ -0.9
UBE3B-204ENST00000449510 CFAP126Q5VTH2 177 aa9.43□□□□□ -0.9
UBE3B-204ENST00000449510 MORN3Q6PF18 240 aaPredicted RBP9.43□□□□□ -0.9
UBE3B-204ENST00000449510 DAZ1Q9NQZ3 744 aaKnown RBP9.43□□□□□ -0.9
UBE3B-204ENST00000449510 A0A0J9YY99 117 aa9.43□□□□□ -0.9
UBE3B-204ENST00000449510 NEXN-AS1Q8NBZ9 246 aa9.43□□□□□ -0.9
UBE3B-204ENST00000449510 CITED1Q99966 193 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms