RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 FOXA3P55318 350 aaPredicted RBP8.18□□□□□ -1.1
LINC00408-201ENST00000447784 FAM74A4Q5TZK3 123 aa8.18□□□□□ -1.1
LINC00408-201ENST00000447784 CFAP126Q5VTH2 177 aa8.18□□□□□ -1.1
LINC00408-201ENST00000447784 ZNF479Q96JC4 524 aa8.18□□□□□ -1.1
LINC00408-201ENST00000447784 FAM210BQ96KR6 192 aa8.18□□□□□ -1.1
LINC00408-201ENST00000447784 AP1S3Q96PC3 154 aa8.18□□□□□ -1.1
LINC00408-201ENST00000447784 TENM2Q9NT68 2774 aa8.17□□□□□ -1.1
LINC00408-201ENST00000447784 DYNC2H1Q8NCM8 4307 aaKnown RBP8.17□□□□□ -1.1
LINC00408-201ENST00000447784 IGHV4-4A0A075B6R2 117 aa8.17□□□□□ -1.1
LINC00408-201ENST00000447784 A0A087WWL8 130 aa8.17□□□□□ -1.1
LINC00408-201ENST00000447784 IGHV3-73A0A0B4J1V6 119 aa8.17□□□□□ -1.1
LINC00408-201ENST00000447784 A0A1B0GUT8 65 aa8.17□□□□□ -1.1
LINC00408-201ENST00000447784 SMIM27A0A1W2PRY6 76 aa8.17□□□□□ -1.1
LINC00408-201ENST00000447784 SNAPINO95295 136 aa8.17□□□□□ -1.1
LINC00408-201ENST00000447784 NTF3P20783 257 aa8.17□□□□□ -1.1
LINC00408-201ENST00000447784 RIGQ13278 110 aa8.17□□□□□ -1.1
LINC00408-201ENST00000447784 RHEBQ15382 184 aa8.17□□□□□ -1.1
LINC00408-201ENST00000447784 ZFP2Q6ZN57 461 aa8.17□□□□□ -1.1
LINC00408-201ENST00000447784 CLRN3Q8NCR9 226 aa8.17□□□□□ -1.1
LINC00408-201ENST00000447784 RPS10P5Q9NQ39 176 aa8.17□□□□□ -1.1
LINC00408-201ENST00000447784 HHLA3Q9XRX5 114 aa8.17□□□□□ -1.1
LINC00408-201ENST00000447784 C7orf77A4D0Y5 90 aa8.16□□□□□ -1.1
LINC00408-201ENST00000447784 F5H697 171 aa8.16□□□□□ -1.1
LINC00408-201ENST00000447784 PAX4O43316 350 aa8.16□□□□□ -1.1
LINC00408-201ENST00000447784 HOXA5P20719 270 aa8.16□□□□□ -1.1
LINC00408-201ENST00000447784 S100PP25815 95 aa8.16□□□□□ -1.1
LINC00408-201ENST00000447784 KCNIP4Q6PIL6 250 aa8.16□□□□□ -1.1
LINC00408-201ENST00000447784 C14orf178Q8N769 122 aaPredicted RBP8.16□□□□□ -1.1
LINC00408-201ENST00000447784 NUP35Q8NFH5 326 aa8.16□□□□□ -1.1
LINC00408-201ENST00000447784 CNFNQ9BYD5 112 aa8.16□□□□□ -1.1
LINC00408-201ENST00000447784 JPT2Q9H910 190 aa8.16□□□□□ -1.1
LINC00408-201ENST00000447784 SACSQ9NZJ4 4579 aa8.16□□□□□ -1.1
LINC00408-201ENST00000447784 PRO0255Q9UI72 69 aa8.16□□□□□ -1.1
LINC00408-201ENST00000447784 TRAV26-1A0A087WT03 109 aa8.15□□□□□ -1.1
LINC00408-201ENST00000447784 A0A0J9YY99 117 aa8.15□□□□□ -1.1
LINC00408-201ENST00000447784 S100A8P05109 93 aa8.15□□□□□ -1.1
LINC00408-201ENST00000447784 TCTAP57738 103 aa8.15□□□□□ -1.1
LINC00408-201ENST00000447784 FHL2Q14192 279 aa8.15□□□□□ -1.1
LINC00408-201ENST00000447784 ZNF56Q15929 161 aa8.15□□□□□ -1.1
LINC00408-201ENST00000447784 TMEM88Q6PEY1 159 aa8.15□□□□□ -1.1
LINC00408-201ENST00000447784 POM121L12Q8N7R1 296 aa8.15□□□□□ -1.1
LINC00408-201ENST00000447784 LINC00476Q8WZB0 136 aa8.15□□□□□ -1.1
LINC00408-201ENST00000447784 PRADC1Q9BSG0 188 aa8.15□□□□□ -1.1
LINC00408-201ENST00000447784 SAMD10Q9BYL1 202 aa8.15□□□□□ -1.1
LINC00408-201ENST00000447784 MSRB1Q9NZV6 116 aa8.15□□□□□ -1.1
LINC00408-201ENST00000447784 A0A087WWC5 75 aa8.14□□□□□ -1.11
LINC00408-201ENST00000447784 A0A1B0GW15 77 aa8.14□□□□□ -1.11
LINC00408-201ENST00000447784 CRYGDP07320 174 aa8.14□□□□□ -1.11
LINC00408-201ENST00000447784 MGPP08493 103 aa8.14□□□□□ -1.11
LINC00408-201ENST00000447784 IMMP2LQ96T52 175 aa8.14□□□□□ -1.11
LINC00408-201ENST00000447784 TMEM242Q9NWH2 141 aa8.14□□□□□ -1.11
LINC00408-201ENST00000447784 RYR2Q92736 4967 aa8.13□□□□□ -1.11
LINC00408-201ENST00000447784 TRBV6-4A0A1B0GX49 114 aa8.13□□□□□ -1.11
LINC00408-201ENST00000447784 H3BNG1 76 aa8.13□□□□□ -1.11
LINC00408-201ENST00000447784 NUDT3O95989 172 aa8.13□□□□□ -1.11
LINC00408-201ENST00000447784 EVI2AP22794 236 aa8.13□□□□□ -1.11
LINC00408-201ENST00000447784 CRYBA4P53673 196 aa8.13□□□□□ -1.11
LINC00408-201ENST00000447784 FAM3BP58499 235 aaPredicted RBP8.13□□□□□ -1.11
LINC00408-201ENST00000447784 RAB4BP61018 213 aa8.13□□□□□ -1.11
LINC00408-201ENST00000447784 RHOHQ15669 191 aa8.13□□□□□ -1.11
LINC00408-201ENST00000447784 C15orf53Q8NAA6 179 aa8.13□□□□□ -1.11
LINC00408-201ENST00000447784 BTF3L4Q96K17 158 aa8.13□□□□□ -1.11
LINC00408-201ENST00000447784 DPH3P1Q9H4G8 78 aa8.13□□□□□ -1.11
LINC00408-201ENST00000447784 GATA1P15976 413 aaPredicted RBP8.12□□□□□ -1.11
LINC00408-201ENST00000447784 CAMPP49913 170 aa8.12□□□□□ -1.11
LINC00408-201ENST00000447784 MRPL54Q6P161 138 aaKnown RBP8.12□□□□□ -1.11
LINC00408-201ENST00000447784 ICOSQ9Y6W8 199 aa8.12□□□□□ -1.11
LINC00408-201ENST00000447784 LYSTQ99698 3801 aa8.12□□□□□ -1.11
LINC00408-201ENST00000447784 H7C1H1 209 aa8.11□□□□□ -1.11
LINC00408-201ENST00000447784 LY6G6CO95867 125 aa8.11□□□□□ -1.11
LINC00408-201ENST00000447784 GYPEP15421 78 aa8.11□□□□□ -1.11
LINC00408-201ENST00000447784 HBBP68871 147 aa8.11□□□□□ -1.11
LINC00408-201ENST00000447784 MRPL23Q16540 153 aaKnown RBP8.11□□□□□ -1.11
LINC00408-201ENST00000447784 LGALS9CQ6DKI2 356 aa8.11□□□□□ -1.11
LINC00408-201ENST00000447784 UFSP1Q6NVU6 142 aa8.11□□□□□ -1.11
LINC00408-201ENST00000447784 ATP5L2Q7Z4Y8 100 aa8.11□□□□□ -1.11
LINC00408-201ENST00000447784 SLC25A29Q8N8R3 303 aa8.11□□□□□ -1.11
LINC00408-201ENST00000447784 VSIG2Q96IQ7 327 aa8.11□□□□□ -1.11
LINC00408-201ENST00000447784 TRAV9-1A0A075B6T8 112 aa8.1□□□□□ -1.11
LINC00408-201ENST00000447784 K7EQD1 137 aa8.1□□□□□ -1.11
LINC00408-201ENST00000447784 SRIP30626 198 aa8.1□□□□□ -1.11
LINC00408-201ENST00000447784 Q6ZSN1 163 aa8.1□□□□□ -1.11
LINC00408-201ENST00000447784 SH2D6Q7Z4S9 175 aa8.1□□□□□ -1.11
LINC00408-201ENST00000447784 TMEM191AQ9H0A3 160 aa8.1□□□□□ -1.11
LINC00408-201ENST00000447784 KIF25-AS1Q9Y6Z4 181 aa8.1□□□□□ -1.11
LINC00408-201ENST00000447784 URGCP-MRPS24S4R325 110 aa8.1□□□□□ -1.11
LINC00408-201ENST00000447784 TRBV10-1A0A0K0K1A3 114 aa8.09□□□□□ -1.11
LINC00408-201ENST00000447784 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.09□□□□□ -1.11
LINC00408-201ENST00000447784 APLNQ9ULZ1 77 aa8.09□□□□□ -1.11
LINC00408-201ENST00000447784 DNAH1Q9P2D7 4330 aa8.09□□□□□ -1.11
LINC00408-201ENST00000447784 PLECQ15149 4684 aaKnown RBP8.08□□□□□ -1.12
LINC00408-201ENST00000447784 GAGE12JA6NER3 117 aa8.08□□□□□ -1.12
LINC00408-201ENST00000447784 LINC00315P59091 139 aa8.08□□□□□ -1.12
LINC00408-201ENST00000447784 RPL36AP83881 106 aaKnown RBP8.08□□□□□ -1.12
LINC00408-201ENST00000447784 GAGE1Q13065 139 aa8.08□□□□□ -1.12
LINC00408-201ENST00000447784 GAGE4Q13068 117 aa8.08□□□□□ -1.12
LINC00408-201ENST00000447784 GAGE5Q13069 117 aa8.08□□□□□ -1.12
LINC00408-201ENST00000447784 GAGE13Q4V321 117 aa8.08□□□□□ -1.12
LINC00408-201ENST00000447784 SUMO4Q6EEV6 95 aa8.08□□□□□ -1.12
LINC00408-201ENST00000447784 NEGR1Q7Z3B1 354 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms