RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 TREM1Q9NP99 234 aa4.63□□□□□ -1.67
LRRC28-203ENST00000447360 TMEM167BQ9NRX6 74 aa4.63□□□□□ -1.67
LRRC28-203ENST00000447360 PSG8Q9UQ74 426 aa4.63□□□□□ -1.67
LRRC28-203ENST00000447360 COX11Q9Y6N1 276 aa4.63□□□□□ -1.67
LRRC28-203ENST00000447360 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.63□□□□□ -1.67
LRRC28-203ENST00000447360 TRAV34A0A0B4J273 112 aa4.62□□□□□ -1.67
LRRC28-203ENST00000447360 TRAV21A0A0B4J279 112 aa4.62□□□□□ -1.67
LRRC28-203ENST00000447360 IGHV3-16A0A0C4DH30 117 aa4.62□□□□□ -1.67
LRRC28-203ENST00000447360 CTXND1A0A1B0GTU2 59 aa4.62□□□□□ -1.67
LRRC28-203ENST00000447360 SERTM2A0A1B0GWG4 89 aa4.62□□□□□ -1.67
LRRC28-203ENST00000447360 A0A1W2PRE2 83 aa4.62□□□□□ -1.67
LRRC28-203ENST00000447360 HMSDA8MTL9 139 aa4.62□□□□□ -1.67
LRRC28-203ENST00000447360 TYMSP04818 313 aa4.62□□□□□ -1.67
LRRC28-203ENST00000447360 PFN1P07737 140 aaKnown RBP4.62□□□□□ -1.67
LRRC28-203ENST00000447360 SFTA3P0C7M3 94 aa4.62□□□□□ -1.67
LRRC28-203ENST00000447360 FGF8P55075 233 aaPredicted RBP4.62□□□□□ -1.67
LRRC28-203ENST00000447360 OR10J3Q5JRS4 329 aa4.62□□□□□ -1.67
LRRC28-203ENST00000447360 KCNRGQ8N5I3 272 aa4.62□□□□□ -1.67
LRRC28-203ENST00000447360 NHLRC2Q8NBF2 726 aa4.62□□□□□ -1.67
LRRC28-203ENST00000447360 SPXQ9BT56 116 aa4.62□□□□□ -1.67
LRRC28-203ENST00000447360 TRAV4A0A0B4J268 109 aa4.61□□□□□ -1.67
LRRC28-203ENST00000447360 KRTAP23-1A1A580 65 aa4.61□□□□□ -1.67
LRRC28-203ENST00000447360 FAM74A7A6NL05 159 aa4.61□□□□□ -1.67
LRRC28-203ENST00000447360 PRYO14603 147 aa4.61□□□□□ -1.67
LRRC28-203ENST00000447360 GCGP01275 180 aa4.61□□□□□ -1.67
LRRC28-203ENST00000447360 IGHV3-30P01768 117 aa4.61□□□□□ -1.67
LRRC28-203ENST00000447360 IGHV3-33P01772 117 aa4.61□□□□□ -1.67
LRRC28-203ENST00000447360 NPSP0C0P6 89 aa4.61□□□□□ -1.67
LRRC28-203ENST00000447360 IGHV3-30-3P0DP02 117 aa4.61□□□□□ -1.67
LRRC28-203ENST00000447360 IGHV3-30-5P0DP03 117 aa4.61□□□□□ -1.67
LRRC28-203ENST00000447360 FHITP49789 147 aa4.61□□□□□ -1.67
LRRC28-203ENST00000447360 FLI1Q01543 452 aaPredicted RBP4.61□□□□□ -1.67
LRRC28-203ENST00000447360 ZNF345Q14585 488 aa4.61□□□□□ -1.67
LRRC28-203ENST00000447360 LELP1Q5T871 98 aa4.61□□□□□ -1.67
LRRC28-203ENST00000447360 Q6ZNX1 250 aa4.61□□□□□ -1.67
LRRC28-203ENST00000447360 PRNTQ86SH4 94 aa4.61□□□□□ -1.67
LRRC28-203ENST00000447360 CYB561D1Q8N8Q1 229 aa4.61□□□□□ -1.67
LRRC28-203ENST00000447360 TMEM75Q8N9X5 138 aa4.61□□□□□ -1.67
LRRC28-203ENST00000447360 KRTAP9-2Q9BYQ4 174 aa4.61□□□□□ -1.67
LRRC28-203ENST00000447360 NAGKQ9UJ70 344 aa4.61□□□□□ -1.67
LRRC28-203ENST00000447360 MUC2Q02817 5179 aa4.6□□□□□ -1.67
LRRC28-203ENST00000447360 IGKV3D-20A0A0C4DH25 116 aa4.6□□□□□ -1.67
LRRC28-203ENST00000447360 LOC100131303A0A0U1RQF7 123 aa4.6□□□□□ -1.67
LRRC28-203ENST00000447360 M0R2P5 195 aa4.6□□□□□ -1.67
LRRC28-203ENST00000447360 SEC11BP0C7V7 166 aa4.6□□□□□ -1.67
LRRC28-203ENST00000447360 CRIP1P50238 77 aa4.6□□□□□ -1.67
LRRC28-203ENST00000447360 LINC00310P59036 64 aa4.6□□□□□ -1.67
LRRC28-203ENST00000447360 UBE2G2P60604 165 aa4.6□□□□□ -1.67
LRRC28-203ENST00000447360 SMUG1Q53HV7 270 aa4.6□□□□□ -1.67
LRRC28-203ENST00000447360 AKR1C8PQ5T2L2 129 aa4.6□□□□□ -1.67
LRRC28-203ENST00000447360 DPPA3Q6W0C5 159 aa4.6□□□□□ -1.67
LRRC28-203ENST00000447360 OR4C5Q8NGB2 326 aa4.6□□□□□ -1.67
LRRC28-203ENST00000447360 ATP6V0E2Q8NHE4 81 aa4.6□□□□□ -1.67
LRRC28-203ENST00000447360 MBD3L1Q8WWY6 194 aa4.6□□□□□ -1.67
LRRC28-203ENST00000447360 BAALCQ8WXS3 180 aa4.6□□□□□ -1.67
LRRC28-203ENST00000447360 KCNS1Q96KK3 526 aa4.6□□□□□ -1.67
LRRC28-203ENST00000447360 A0A0D9SG52 128 aa4.59□□□□□ -1.67
LRRC28-203ENST00000447360 MAP1LC3B2A6NCE7 125 aa4.59□□□□□ -1.67
LRRC28-203ENST00000447360 FBLL1A6NHQ2 334 aaKnown RBP4.59□□□□□ -1.67
LRRC28-203ENST00000447360 K7EQM0 130 aa4.59□□□□□ -1.67
LRRC28-203ENST00000447360 PEX7O00628 323 aa4.59□□□□□ -1.67
LRRC28-203ENST00000447360 GAS8-AS1O95177 125 aa4.59□□□□□ -1.67
LRRC28-203ENST00000447360 RNASE3P12724 160 aaKnown RBP4.59□□□□□ -1.67
LRRC28-203ENST00000447360 GATA1P15976 413 aaPredicted RBP4.59□□□□□ -1.67
LRRC28-203ENST00000447360 SAPCD1Q5SSQ6 148 aa4.59□□□□□ -1.67
LRRC28-203ENST00000447360 COX8CQ7Z4L0 72 aa4.59□□□□□ -1.67
LRRC28-203ENST00000447360 HIST1H2BAQ96A08 127 aa4.59□□□□□ -1.67
LRRC28-203ENST00000447360 PTH2Q96A98 100 aa4.59□□□□□ -1.67
LRRC28-203ENST00000447360 C9orf85Q96MD7 179 aa4.59□□□□□ -1.67
LRRC28-203ENST00000447360 NDFIP1Q9BT67 221 aa4.59□□□□□ -1.67
LRRC28-203ENST00000447360 NKX6-2Q9C056 277 aaPredicted RBP4.59□□□□□ -1.67
LRRC28-203ENST00000447360 MAP1LC3BQ9GZQ8 125 aa4.59□□□□□ -1.67
LRRC28-203ENST00000447360 SDF2L1Q9HCN8 221 aa4.59□□□□□ -1.67
LRRC28-203ENST00000447360 FABP5P3A8MUU1 101 aa4.58□□□□□ -1.68
LRRC28-203ENST00000447360 BCL2L11O43521 198 aa4.58□□□□□ -1.68
LRRC28-203ENST00000447360 IFNA7P01567 189 aa4.58□□□□□ -1.68
LRRC28-203ENST00000447360 LGALSLQ3ZCW2 172 aaPredicted RBP4.58□□□□□ -1.68
LRRC28-203ENST00000447360 ZNF876PQ49A33 203 aa4.58□□□□□ -1.68
LRRC28-203ENST00000447360 CFAP126Q5VTH2 177 aa4.58□□□□□ -1.68
LRRC28-203ENST00000447360 TMUB2Q71RG4 321 aa4.58□□□□□ -1.68
LRRC28-203ENST00000447360 RMI2Q96E14 147 aa4.58□□□□□ -1.68
LRRC28-203ENST00000447360 ZC2HC1AQ96GY0 325 aa4.58□□□□□ -1.68
LRRC28-203ENST00000447360 GTSF1LQ9H1H1 148 aa4.58□□□□□ -1.68
LRRC28-203ENST00000447360 ARL2-SNX15V9GYD0 113 aa4.58□□□□□ -1.68
LRRC28-203ENST00000447360 TRBV6-1A0A0K0K1D8 114 aa4.57□□□□□ -1.68
LRRC28-203ENST00000447360 KANTRA0A1W2PQU2 76 aa4.57□□□□□ -1.68
LRRC28-203ENST00000447360 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.57□□□□□ -1.68
LRRC28-203ENST00000447360 UMAD1C9J7I0 102 aa4.57□□□□□ -1.68
LRRC28-203ENST00000447360 CIDEAO60543 219 aa4.57□□□□□ -1.68
LRRC28-203ENST00000447360 BLOC1S1P78537 153 aa4.57□□□□□ -1.68
LRRC28-203ENST00000447360 CCL20P78556 96 aa4.57□□□□□ -1.68
LRRC28-203ENST00000447360 Q86TA4 180 aa4.57□□□□□ -1.68
LRRC28-203ENST00000447360 SLC25A29Q8N8R3 303 aa4.57□□□□□ -1.68
LRRC28-203ENST00000447360 STOML3Q8TAV4 291 aa4.57□□□□□ -1.68
LRRC28-203ENST00000447360 SFT2D1Q8WV19 159 aa4.57□□□□□ -1.68
LRRC28-203ENST00000447360 PRADC1Q9BSG0 188 aa4.57□□□□□ -1.68
LRRC28-203ENST00000447360 ZNF471Q9BX82 626 aaPredicted RBP4.57□□□□□ -1.68
LRRC28-203ENST00000447360 ZFP30Q9Y2G7 519 aa4.57□□□□□ -1.68
LRRC28-203ENST00000447360 IGHV3-73A0A0B4J1V6 119 aa4.56□□□□□ -1.68
LRRC28-203ENST00000447360 KRTAP9-6A0A140TA67 174 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms