RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 A0A087WWL8 130 aa12.08□□□□□ -0.48
COL9A1-205ENST00000447041 SMLR1H3BR10 107 aa12.08□□□□□ -0.48
COL9A1-205ENST00000447041 RHODO00212 210 aa12.08□□□□□ -0.48
COL9A1-205ENST00000447041 ZNF674Q2M3X9 581 aa12.08□□□□□ -0.48
COL9A1-205ENST00000447041 M0R381 172 aa12.07□□□□□ -0.48
COL9A1-205ENST00000447041 LTAP01374 205 aa12.07□□□□□ -0.48
COL9A1-205ENST00000447041 LINC01559Q495D7 138 aa12.07□□□□□ -0.48
COL9A1-205ENST00000447041 CST9LP1Q5W188 147 aa12.07□□□□□ -0.48
COL9A1-205ENST00000447041 TM2D2Q9BX73 214 aa12.07□□□□□ -0.48
COL9A1-205ENST00000447041 FAM30AQ9NZY2 134 aa12.07□□□□□ -0.48
COL9A1-205ENST00000447041 PHLDA3Q9Y5J5 127 aa12.07□□□□□ -0.48
COL9A1-205ENST00000447041 MYCBP2O75592 4640 aa12.07□□□□□ -0.48
COL9A1-205ENST00000447041 TRBV6-1A0A0K0K1D8 114 aa12.06□□□□□ -0.48
COL9A1-205ENST00000447041 LECT2O14960 151 aa12.06□□□□□ -0.48
COL9A1-205ENST00000447041 AKR1C3P42330 323 aa12.06□□□□□ -0.48
COL9A1-205ENST00000447041 RGS21Q2M5E4 152 aa12.06□□□□□ -0.48
COL9A1-205ENST00000447041 SFRP2Q96HF1 295 aa12.06□□□□□ -0.48
COL9A1-205ENST00000447041 A0A087WWC5 75 aa12.05□□□□□ -0.48
COL9A1-205ENST00000447041 TRAV8-3A0A0A6YYJ7 113 aa12.05□□□□□ -0.48
COL9A1-205ENST00000447041 TPT1P13693 172 aaKnown RBP12.05□□□□□ -0.48
COL9A1-205ENST00000447041 STOML3Q8TAV4 291 aa12.05□□□□□ -0.48
COL9A1-205ENST00000447041 TCEAL7Q9BRU2 100 aa12.05□□□□□ -0.48
COL9A1-205ENST00000447041 PAGE4O60829 102 aa12.04□□□□□ -0.48
COL9A1-205ENST00000447041 ZFP82Q8N141 532 aa12.04□□□□□ -0.48
COL9A1-205ENST00000447041 DNAJC30Q96LL9 226 aa12.04□□□□□ -0.48
COL9A1-205ENST00000447041 A0A1B0GV50 99 aa12.03□□□□□ -0.48
COL9A1-205ENST00000447041 FAM229AH3BQW9 127 aa12.03□□□□□ -0.48
COL9A1-205ENST00000447041 TOR2AQ5JU69 321 aa12.03□□□□□ -0.48
COL9A1-205ENST00000447041 NIT1Q86X76 327 aa12.03□□□□□ -0.48
COL9A1-205ENST00000447041 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.02□□□□□ -0.49
COL9A1-205ENST00000447041 RPL19P84098 196 aaKnown RBP12.02□□□□□ -0.49
COL9A1-205ENST00000447041 KCNRGQ8N5I3 272 aa12.02□□□□□ -0.49
COL9A1-205ENST00000447041 FAM213BQ8TBF2 198 aa12.02□□□□□ -0.49
COL9A1-205ENST00000447041 URGCP-MRPS24S4R325 110 aa12.02□□□□□ -0.49
COL9A1-205ENST00000447041 SCO2A0A1W2PP80 73 aa12.01□□□□□ -0.49
COL9A1-205ENST00000447041 ZNF345Q14585 488 aa12.01□□□□□ -0.49
COL9A1-205ENST00000447041 BAALCQ8WXS3 180 aa12.01□□□□□ -0.49
COL9A1-205ENST00000447041 SFT2D1Q8WV19 159 aa12□□□□□ -0.49
COL9A1-205ENST00000447041 KLK12Q9UKR0 248 aa12□□□□□ -0.49
COL9A1-205ENST00000447041 TRBV10-1A0A0K0K1A3 114 aa11.99□□□□□ -0.49
COL9A1-205ENST00000447041 C1QBP02746 253 aa11.99□□□□□ -0.49
COL9A1-205ENST00000447041 SEC11BP0C7V7 166 aa11.99□□□□□ -0.49
COL9A1-205ENST00000447041 UBE2D3P61077 147 aa11.99□□□□□ -0.49
COL9A1-205ENST00000447041 UBE2D2P62837 147 aa11.99□□□□□ -0.49
COL9A1-205ENST00000447041 RPL36AP83881 106 aaKnown RBP11.99□□□□□ -0.49
COL9A1-205ENST00000447041 Q6ZSA8 131 aa11.99□□□□□ -0.49
COL9A1-205ENST00000447041 OR10AG1Q8NH19 301 aa11.99□□□□□ -0.49
COL9A1-205ENST00000447041 MBD3L1Q8WWY6 194 aa11.99□□□□□ -0.49
COL9A1-205ENST00000447041 RPL36ALQ969Q0 106 aaKnown RBP11.99□□□□□ -0.49
COL9A1-205ENST00000447041 SRRM2Q9UQ35 2752 aaKnown RBP11.98□□□□□ -0.49
COL9A1-205ENST00000447041 IGKV2D-24A0A075B6R9 120 aa11.98□□□□□ -0.49
COL9A1-205ENST00000447041 LINC01620Q4KN68 170 aa11.98□□□□□ -0.49
COL9A1-205ENST00000447041 ZNF471Q9BX82 626 aaPredicted RBP11.98□□□□□ -0.49
COL9A1-205ENST00000447041 COX11Q9Y6N1 276 aa11.98□□□□□ -0.49
COL9A1-205ENST00000447041 TRBV7-3A0A075B6L6 115 aa11.97□□□□□ -0.49
COL9A1-205ENST00000447041 A0A087WX48 190 aa11.97□□□□□ -0.49
COL9A1-205ENST00000447041 UMAD1C9J7I0 102 aa11.97□□□□□ -0.49
COL9A1-205ENST00000447041 ZNF56Q15929 161 aa11.97□□□□□ -0.49
COL9A1-205ENST00000447041 UBE2WQ96B02 151 aa11.97□□□□□ -0.49
COL9A1-205ENST00000447041 RMI2Q96E14 147 aa11.97□□□□□ -0.49
COL9A1-205ENST00000447041 MLST8Q9BVC4 326 aa11.97□□□□□ -0.49
COL9A1-205ENST00000447041 MUC21A0A0G2JKD1 596 aa11.96□□□□□ -0.49
COL9A1-205ENST00000447041 MUC21A0A140T8X8 626 aa11.96□□□□□ -0.49
COL9A1-205ENST00000447041 BCL2L11O43521 198 aa11.96□□□□□ -0.49
COL9A1-205ENST00000447041 PFDN1O60925 122 aa11.96□□□□□ -0.49
COL9A1-205ENST00000447041 S100A9P06702 114 aaKnown RBP11.96□□□□□ -0.49
COL9A1-205ENST00000447041 CXCL1P09341 107 aa11.96□□□□□ -0.49
COL9A1-205ENST00000447041 PRR27Q6MZM9 219 aa11.96□□□□□ -0.49
COL9A1-205ENST00000447041 BAGE2Q86Y30 109 aa11.96□□□□□ -0.49
COL9A1-205ENST00000447041 NEXN-AS1Q8NBZ9 246 aa11.96□□□□□ -0.49
COL9A1-205ENST00000447041 OR10G8Q8NGN5 311 aa11.96□□□□□ -0.49
COL9A1-205ENST00000447041 CHCHD7Q9BUK0 85 aa11.96□□□□□ -0.49
COL9A1-205ENST00000447041 DMBT1Q9UGM3 2413 aaPredicted RBP11.96□□□□□ -0.5
COL9A1-205ENST00000447041 KANTRA0A1W2PQU2 76 aa11.95□□□□□ -0.5
COL9A1-205ENST00000447041 HMSDA8MTL9 139 aa11.95□□□□□ -0.5
COL9A1-205ENST00000447041 SNAI2O43623 268 aa11.95□□□□□ -0.5
COL9A1-205ENST00000447041 RAB4BP61018 213 aa11.95□□□□□ -0.5
COL9A1-205ENST00000447041 FLG2Q5D862 2391 aaPredicted RBP11.94□□□□□ -0.5
COL9A1-205ENST00000447041 KCNIP4Q6PIL6 250 aa11.94□□□□□ -0.5
COL9A1-205ENST00000447041 TRBV6-8A0A0A6YYG3 113 aa11.93□□□□□ -0.5
COL9A1-205ENST00000447041 A0A0D9SG52 128 aa11.93□□□□□ -0.5
COL9A1-205ENST00000447041 RBFOX3A6NFN3 312 aa11.93□□□□□ -0.5
COL9A1-205ENST00000447041 H2AFB1P0C5Y9 115 aa11.93□□□□□ -0.5
COL9A1-205ENST00000447041 ELOBQ15370 118 aa11.93□□□□□ -0.5
COL9A1-205ENST00000447041 ATRAIDQ6UW56 229 aa11.93□□□□□ -0.5
COL9A1-205ENST00000447041 LINC00528Q8N1L1 170 aa11.93□□□□□ -0.5
COL9A1-205ENST00000447041 Q8N976 141 aa11.93□□□□□ -0.5
COL9A1-205ENST00000447041 SSBP4Q9BWG4 385 aaPredicted RBP11.93□□□□□ -0.5
COL9A1-205ENST00000447041 TMEM262E9PQX1 116 aa11.92□□□□□ -0.5
COL9A1-205ENST00000447041 OR5AL1P0C617 328 aa11.92□□□□□ -0.5
COL9A1-205ENST00000447041 SSTP61278 116 aa11.92□□□□□ -0.5
COL9A1-205ENST00000447041 MPV17L2Q567V2 206 aa11.92□□□□□ -0.5
COL9A1-205ENST00000447041 SPANXN1Q5VSR9 72 aa11.92□□□□□ -0.5
COL9A1-205ENST00000447041 TMUB2Q71RG4 321 aa11.92□□□□□ -0.5
COL9A1-205ENST00000447041 RPL35P42766 123 aaKnown RBP11.91□□□□□ -0.5
COL9A1-205ENST00000447041 SCXQ7RTU7 201 aa11.91□□□□□ -0.5
COL9A1-205ENST00000447041 DERL1Q9BUN8 251 aa11.91□□□□□ -0.5
COL9A1-205ENST00000447041 CCL20P78556 96 aa11.9□□□□□ -0.5
COL9A1-205ENST00000447041 Q0VG73 95 aa11.9□□□□□ -0.5
COL9A1-205ENST00000447041 ENHOQ6UWT2 76 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms