RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 LRRC75A-AS1Q8N1F1 130 aa6.12□□□□□ -1.43
SMG1-202ENST00000446231 COL8A2P25067 703 aa6.12□□□□□ -1.43
SMG1-202ENST00000446231 CFHR4Q92496 578 aa6.12□□□□□ -1.43
SMG1-202ENST00000446231 PRAC2D3DTV9 90 aa6.12□□□□□ -1.43
SMG1-202ENST00000446231 ATP5J2P56134 94 aa6.12□□□□□ -1.43
SMG1-202ENST00000446231 MALP21145 153 aa6.12□□□□□ -1.43
SMG1-202ENST00000446231 LY6G6EA0A0G2JKS1 128 aa6.12□□□□□ -1.43
SMG1-202ENST00000446231 VPREB3Q9UKI3 123 aa6.12□□□□□ -1.43
SMG1-202ENST00000446231 U3KQA8 63 aa6.12□□□□□ -1.43
SMG1-202ENST00000446231 LINC00694P0DN24 101 aa6.12□□□□□ -1.43
SMG1-202ENST00000446231 IGLV1-44P01699 117 aa6.12□□□□□ -1.43
SMG1-202ENST00000446231 ZNF883P0CG24 379 aa6.12□□□□□ -1.43
SMG1-202ENST00000446231 RHPN1-AS1Q9BWJ2 59 aa6.11□□□□□ -1.43
SMG1-202ENST00000446231 TET2Q6N021 2002 aaPredicted RBP6.11□□□□□ -1.43
SMG1-202ENST00000446231 CRIP1P50238 77 aa6.11□□□□□ -1.43
SMG1-202ENST00000446231 DIAPH2-AS1Q14236 149 aa6.11□□□□□ -1.43
SMG1-202ENST00000446231 Q9H8V8 135 aa6.11□□□□□ -1.43
SMG1-202ENST00000446231 CDIP1Q9H305 208 aa6.11□□□□□ -1.43
SMG1-202ENST00000446231 FAM223BA6NKX1 122 aa6.11□□□□□ -1.43
SMG1-202ENST00000446231 FAM223AQ8IWN6 122 aa6.11□□□□□ -1.43
SMG1-202ENST00000446231 NEXN-AS1Q8NBZ9 246 aa6.1□□□□□ -1.43
SMG1-202ENST00000446231 LINC00574Q9H8X3 128 aa6.1□□□□□ -1.43
SMG1-202ENST00000446231 CENPVL3A0A0U1RRI6 287 aa6.1□□□□□ -1.43
SMG1-202ENST00000446231 PIP4P2Q8N4L2 257 aa6.1□□□□□ -1.43
SMG1-202ENST00000446231 MRPS12O15235 138 aaKnown RBP6.1□□□□□ -1.43
SMG1-202ENST00000446231 IGHV1OR15-1A0A075B7D0 117 aa6.1□□□□□ -1.43
SMG1-202ENST00000446231 HHLA3Q9XRX5 114 aa6.1□□□□□ -1.43
SMG1-202ENST00000446231 CTSGP08311 255 aa6.1□□□□□ -1.43
SMG1-202ENST00000446231 CD59P13987 128 aa6.1□□□□□ -1.43
SMG1-202ENST00000446231 NFE4Q86UQ8 179 aa6.1□□□□□ -1.43
SMG1-202ENST00000446231 KNCNA6PVL3 124 aa6.1□□□□□ -1.43
SMG1-202ENST00000446231 LOXP28300 417 aaPredicted RBP6.1□□□□□ -1.43
SMG1-202ENST00000446231 CRYGBP07316 175 aa6.1□□□□□ -1.43
SMG1-202ENST00000446231 RPL36AP83881 106 aaKnown RBP6.1□□□□□ -1.43
SMG1-202ENST00000446231 RPL36ALQ969Q0 106 aaKnown RBP6.1□□□□□ -1.43
SMG1-202ENST00000446231 TRGV2A0A075B6R0 118 aa6.1□□□□□ -1.43
SMG1-202ENST00000446231 WDR90Q96KV7 1748 aa6.1□□□□□ -1.43
SMG1-202ENST00000446231 IGHV3-30P01768 117 aa6.1□□□□□ -1.43
SMG1-202ENST00000446231 IGHV3-30-5P0DP03 117 aa6.1□□□□□ -1.43
SMG1-202ENST00000446231 FAM110DQ8TAY7 271 aaPredicted RBP6.1□□□□□ -1.43
SMG1-202ENST00000446231 TRAV4A0A0B4J268 109 aa6.09□□□□□ -1.43
SMG1-202ENST00000446231 LINC01619G3V211 115 aa6.09□□□□□ -1.43
SMG1-202ENST00000446231 DAND5Q8N907 189 aa6.09□□□□□ -1.43
SMG1-202ENST00000446231 PRSS33Q8NF86 280 aa6.09□□□□□ -1.43
SMG1-202ENST00000446231 TRGV1A0A0A0MS02 117 aa6.09□□□□□ -1.43
SMG1-202ENST00000446231 HOXD3P31249 432 aaPredicted RBP6.09□□□□□ -1.43
SMG1-202ENST00000446231 TIMM17AQ99595 171 aa6.09□□□□□ -1.43
SMG1-202ENST00000446231 ZMAT4Q9H898 229 aa6.09□□□□□ -1.43
SMG1-202ENST00000446231 TMEM219Q86XT9 240 aa6.09□□□□□ -1.43
SMG1-202ENST00000446231 G3V318 75 aa6.09□□□□□ -1.43
SMG1-202ENST00000446231 A0A0J9YXV3 536 aa6.09□□□□□ -1.43
SMG1-202ENST00000446231 IGHV1-69DA0A0B4J2H0 117 aa6.09□□□□□ -1.43
SMG1-202ENST00000446231 SUMO4Q6EEV6 95 aa6.09□□□□□ -1.43
SMG1-202ENST00000446231 NPBQ8NG41 125 aa6.09□□□□□ -1.43
SMG1-202ENST00000446231 IGLV3-9A0A075B6K5 115 aa6.09□□□□□ -1.44
SMG1-202ENST00000446231 RNASE13Q5GAN3 156 aaKnown RBP6.09□□□□□ -1.44
SMG1-202ENST00000446231 H0YGX0 51 aa6.09□□□□□ -1.44
SMG1-202ENST00000446231 HAMPP81172 84 aa6.09□□□□□ -1.44
SMG1-202ENST00000446231 SDIM1Q6ZPB5 146 aa6.09□□□□□ -1.44
SMG1-202ENST00000446231 Q6ZQT7 251 aa6.09□□□□□ -1.44
SMG1-202ENST00000446231 ZNF106Q9H2Y7 1883 aaKnown RBP6.08□□□□□ -1.44
SMG1-202ENST00000446231 ORMDL1Q9P0S3 153 aa6.08□□□□□ -1.44
SMG1-202ENST00000446231 FAM240AA0A1B0GVK7 77 aa6.08□□□□□ -1.44
SMG1-202ENST00000446231 C6orf226Q5I0X4 101 aa6.08□□□□□ -1.44
SMG1-202ENST00000446231 Q6Q795 121 aa6.08□□□□□ -1.44
SMG1-202ENST00000446231 Q8N7P7 452 aa6.08□□□□□ -1.44
SMG1-202ENST00000446231 IGHV3-30-3P0DP02 117 aa6.08□□□□□ -1.44
SMG1-202ENST00000446231 ATG2AQ2TAZ0 1938 aa6.08□□□□□ -1.44
SMG1-202ENST00000446231 TMEM105Q8N8V8 129 aa6.08□□□□□ -1.44
SMG1-202ENST00000446231 A0A0J9YY99 117 aa6.08□□□□□ -1.44
SMG1-202ENST00000446231 ITLN2Q8WWU7 325 aaPredicted RBP6.08□□□□□ -1.44
SMG1-202ENST00000446231 IGHG3P01860 377 aa6.08□□□□□ -1.44
SMG1-202ENST00000446231 DAZ1Q9NQZ3 744 aaKnown RBP6.08□□□□□ -1.44
SMG1-202ENST00000446231 SMIM9A6NGZ8 99 aa6.08□□□□□ -1.44
SMG1-202ENST00000446231 TMEM263Q8WUH6 116 aaKnown RBP6.08□□□□□ -1.44
SMG1-202ENST00000446231 TRIAP1O43715 76 aa6.08□□□□□ -1.44
SMG1-202ENST00000446231 URB1-AS1Q96HZ7 61 aa6.08□□□□□ -1.44
SMG1-202ENST00000446231 KLK9Q9UKQ9 250 aa6.08□□□□□ -1.44
SMG1-202ENST00000446231 RPL39P62891 51 aaKnown RBP6.08□□□□□ -1.44
SMG1-202ENST00000446231 DSCR8Q96T75 97 aa6.08□□□□□ -1.44
SMG1-202ENST00000446231 UBE2E1P51965 193 aa6.07□□□□□ -1.44
SMG1-202ENST00000446231 V9GYY9 64 aa6.07□□□□□ -1.44
SMG1-202ENST00000446231 IGHG2P01859 326 aa6.07□□□□□ -1.44
SMG1-202ENST00000446231 OPRPNQ99935 248 aaPredicted RBP6.07□□□□□ -1.44
SMG1-202ENST00000446231 MIAQ16674 131 aa6.07□□□□□ -1.44
SMG1-202ENST00000446231 AJUBAQ96IF1 538 aa6.07□□□□□ -1.44
SMG1-202ENST00000446231 TRBV30A0A0K0K1B3 111 aa6.07□□□□□ -1.44
SMG1-202ENST00000446231 SPRNQ5BIV9 151 aa6.07□□□□□ -1.44
SMG1-202ENST00000446231 E7EUB6 86 aa6.07□□□□□ -1.44
SMG1-202ENST00000446231 NDUFA4O00483 81 aa6.07□□□□□ -1.44
SMG1-202ENST00000446231 VSIG2Q96IQ7 327 aa6.07□□□□□ -1.44
SMG1-202ENST00000446231 SERP2Q8N6R1 65 aa6.07□□□□□ -1.44
SMG1-202ENST00000446231 ATP5EP2Q5VTU8 51 aa6.07□□□□□ -1.44
SMG1-202ENST00000446231 F5H768 121 aa6.07□□□□□ -1.44
SMG1-202ENST00000446231 LENEPQ9Y5L5 61 aa6.06□□□□□ -1.44
SMG1-202ENST00000446231 TRBV7-3A0A075B6L6 115 aa6.06□□□□□ -1.44
SMG1-202ENST00000446231 TRAV12-2A0A075B6T6 113 aa6.06□□□□□ -1.44
SMG1-202ENST00000446231 IGHV7-4-1A0A0J9YVY3 117 aa6.06□□□□□ -1.44
SMG1-202ENST00000446231 CHD6Q8TD26 2715 aa6.06□□□□□ -1.44
SMG1-202ENST00000446231 COX7A2LO14548 114 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 1292.9 ms