RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 TRBV24-1A0A075B6N3 115 aa10.7□□□□□ -0.7
CCNE1-203ENST00000444983 A0A1B0GW15 77 aa10.7□□□□□ -0.7
CCNE1-203ENST00000444983 LINC00315P59091 139 aa10.7□□□□□ -0.7
CCNE1-203ENST00000444983 MRPL54Q6P161 138 aaKnown RBP10.7□□□□□ -0.7
CCNE1-203ENST00000444983 GATD1Q8NB37 220 aa10.7□□□□□ -0.7
CCNE1-203ENST00000444983 SAMD10Q9BYL1 202 aa10.7□□□□□ -0.7
CCNE1-203ENST00000444983 EVI2AP22794 236 aa10.69□□□□□ -0.7
CCNE1-203ENST00000444983 S100A12P80511 92 aa10.69□□□□□ -0.7
CCNE1-203ENST00000444983 RASL11AQ6T310 242 aa10.69□□□□□ -0.7
CCNE1-203ENST00000444983 TRGV2A0A075B6R0 118 aa10.69□□□□□ -0.7
CCNE1-203ENST00000444983 TRAV4A0A0B4J268 109 aa10.69□□□□□ -0.7
CCNE1-203ENST00000444983 DAD1P61803 113 aa10.69□□□□□ -0.7
CCNE1-203ENST00000444983 HBBP68871 147 aa10.69□□□□□ -0.7
CCNE1-203ENST00000444983 C11orf45Q8TAV5 145 aa10.69□□□□□ -0.7
CCNE1-203ENST00000444983 AP1S3Q96PC3 154 aa10.69□□□□□ -0.7
CCNE1-203ENST00000444983 TMEM191AQ9H0A3 160 aa10.69□□□□□ -0.7
CCNE1-203ENST00000444983 TGIF2-C20orf24A0A0A6YYL0 155 aa10.68□□□□□ -0.7
CCNE1-203ENST00000444983 TRGC1P0CF51 173 aa10.68□□□□□ -0.7
CCNE1-203ENST00000444983 ZFP2Q6ZN57 461 aa10.68□□□□□ -0.7
CCNE1-203ENST00000444983 C14orf178Q8N769 122 aaPredicted RBP10.68□□□□□ -0.7
CCNE1-203ENST00000444983 ZNF479Q96JC4 524 aa10.68□□□□□ -0.7
CCNE1-203ENST00000444983 A0A087WWL8 130 aa10.67□□□□□ -0.7
CCNE1-203ENST00000444983 CAMPP49913 170 aa10.67□□□□□ -0.7
CCNE1-203ENST00000444983 NANOS2P60321 138 aaKnown RBP10.67□□□□□ -0.7
CCNE1-203ENST00000444983 LINC00518Q8N0U6 118 aa10.67□□□□□ -0.7
CCNE1-203ENST00000444983 OR4C5Q8NGB2 326 aa10.67□□□□□ -0.7
CCNE1-203ENST00000444983 CIDEAO60543 219 aa10.66□□□□□ -0.7
CCNE1-203ENST00000444983 COLCA2A8K830 154 aa10.66□□□□□ -0.7
CCNE1-203ENST00000444983 S100A8P05109 93 aa10.66□□□□□ -0.7
CCNE1-203ENST00000444983 FHL2Q14192 279 aa10.66□□□□□ -0.7
CCNE1-203ENST00000444983 Q6ZTC4 211 aa10.66□□□□□ -0.7
CCNE1-203ENST00000444983 LINC00469Q8N7U9 141 aa10.66□□□□□ -0.7
CCNE1-203ENST00000444983 DPH3P1Q9H4G8 78 aa10.66□□□□□ -0.7
CCNE1-203ENST00000444983 ATP5G1P05496 136 aa10.65□□□□□ -0.7
CCNE1-203ENST00000444983 HOXA5P20719 270 aa10.65□□□□□ -0.7
CCNE1-203ENST00000444983 FAM74A4Q5TZK3 123 aa10.65□□□□□ -0.7
CCNE1-203ENST00000444983 TMEM136Q6ZRR5 245 aa10.65□□□□□ -0.7
CCNE1-203ENST00000444983 RNF185Q96GF1 192 aa10.65□□□□□ -0.7
CCNE1-203ENST00000444983 FAM210BQ96KR6 192 aa10.65□□□□□ -0.7
CCNE1-203ENST00000444983 RHODO00212 210 aa10.64□□□□□ -0.71
CCNE1-203ENST00000444983 RAB4AP20338 218 aa10.64□□□□□ -0.71
CCNE1-203ENST00000444983 Q6ZSN1 163 aa10.64□□□□□ -0.71
CCNE1-203ENST00000444983 GNB1LQ9BYB4 327 aa10.64□□□□□ -0.71
CCNE1-203ENST00000444983 IGHV3-53P01767 116 aa10.63□□□□□ -0.71
CCNE1-203ENST00000444983 COX19Q49B96 90 aa10.63□□□□□ -0.71
CCNE1-203ENST00000444983 FAM104BQ5XKR9 115 aa10.63□□□□□ -0.71
CCNE1-203ENST00000444983 SMIM15Q7Z3B0 74 aa10.63□□□□□ -0.71
CCNE1-203ENST00000444983 AMN1Q8IY45 258 aa10.63□□□□□ -0.71
CCNE1-203ENST00000444983 IGHV3-73A0A0B4J1V6 119 aa10.63□□□□□ -0.71
CCNE1-203ENST00000444983 SMIM17P0DL12 118 aa10.63□□□□□ -0.71
CCNE1-203ENST00000444983 GATA1P15976 413 aaPredicted RBP10.63□□□□□ -0.71
CCNE1-203ENST00000444983 RAB4BP61018 213 aa10.62□□□□□ -0.71
CCNE1-203ENST00000444983 FRZBQ92765 325 aa10.62□□□□□ -0.71
CCNE1-203ENST00000444983 SLAQ13239 276 aa10.61□□□□□ -0.71
CCNE1-203ENST00000444983 CSMD3Q7Z407 3707 aa10.61□□□□□ -0.71
CCNE1-203ENST00000444983 TRBV6-4A0A1B0GX49 114 aa10.6□□□□□ -0.71
CCNE1-203ENST00000444983 M0QY20 66 aa10.6□□□□□ -0.71
CCNE1-203ENST00000444983 HLA-DQA1P01909 254 aa10.6□□□□□ -0.71
CCNE1-203ENST00000444983 MRPL51Q4U2R6 128 aaKnown RBP10.6□□□□□ -0.71
CCNE1-203ENST00000444983 SLC25A29Q8N8R3 303 aa10.6□□□□□ -0.71
CCNE1-203ENST00000444983 HHLA3Q9XRX5 114 aa10.6□□□□□ -0.71
CCNE1-203ENST00000444983 TRGV4A0A0C4DH28 118 aa10.6□□□□□ -0.71
CCNE1-203ENST00000444983 GAS8-AS1O95177 125 aa10.6□□□□□ -0.71
CCNE1-203ENST00000444983 MT-ND6P03923 174 aa10.6□□□□□ -0.71
CCNE1-203ENST00000444983 CRYBA4P53673 196 aa10.6□□□□□ -0.71
CCNE1-203ENST00000444983 ZNF56Q15929 161 aa10.6□□□□□ -0.71
CCNE1-203ENST00000444983 SUMO4Q6EEV6 95 aa10.6□□□□□ -0.71
CCNE1-203ENST00000444983 VSIG2Q96IQ7 327 aa10.6□□□□□ -0.71
CCNE1-203ENST00000444983 DEFB131BA0A096LNP1 70 aa10.59□□□□□ -0.71
CCNE1-203ENST00000444983 TRAV10A0A0B4J240 114 aa10.59□□□□□ -0.71
CCNE1-203ENST00000444983 TRAV26-2A0A0B4J265 109 aa10.59□□□□□ -0.71
CCNE1-203ENST00000444983 F5H768 121 aa10.59□□□□□ -0.71
CCNE1-203ENST00000444983 MGPP08493 103 aa10.59□□□□□ -0.71
CCNE1-203ENST00000444983 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.59□□□□□ -0.71
CCNE1-203ENST00000444983 Q9UF83 564 aa10.59□□□□□ -0.71
CCNE1-203ENST00000444983 PRO0255Q9UI72 69 aa10.59□□□□□ -0.71
CCNE1-203ENST00000444983 DNAH7Q8WXX0 4024 aa10.59□□□□□ -0.71
CCNE1-203ENST00000444983 F5H697 171 aa10.58□□□□□ -0.72
CCNE1-203ENST00000444983 RAB5AP20339 215 aa10.58□□□□□ -0.72
CCNE1-203ENST00000444983 MRAP2Q96G30 205 aa10.58□□□□□ -0.72
CCNE1-203ENST00000444983 PHLDA1Q8WV24 401 aaPredicted RBP10.57□□□□□ -0.72
CCNE1-203ENST00000444983 HTN3P15516 51 aa10.57□□□□□ -0.72
CCNE1-203ENST00000444983 MRPL18Q9H0U6 180 aaKnown RBP10.57□□□□□ -0.72
CCNE1-203ENST00000444983 TRAPPC1Q9Y5R8 145 aa10.57□□□□□ -0.72
CCNE1-203ENST00000444983 TRAV26-1A0A087WT03 109 aa10.56□□□□□ -0.72
CCNE1-203ENST00000444983 TRBV10-1A0A0K0K1A3 114 aa10.56□□□□□ -0.72
CCNE1-203ENST00000444983 H3BNG1 76 aa10.56□□□□□ -0.72
CCNE1-203ENST00000444983 K7EQD1 137 aa10.56□□□□□ -0.72
CCNE1-203ENST00000444983 PHOX2AO14813 284 aa10.56□□□□□ -0.72
CCNE1-203ENST00000444983 APCSP02743 223 aa10.56□□□□□ -0.72
CCNE1-203ENST00000444983 PPBPP02775 128 aa10.56□□□□□ -0.72
CCNE1-203ENST00000444983 P0DMU3 169 aa10.56□□□□□ -0.72
CCNE1-203ENST00000444983 FAM231AP0DMU4 169 aa10.56□□□□□ -0.72
CCNE1-203ENST00000444983 FAM231CP0DMU5 169 aa10.56□□□□□ -0.72
CCNE1-203ENST00000444983 RPS10P46783 165 aaKnown RBP10.56□□□□□ -0.72
CCNE1-203ENST00000444983 NRACQ8N912 160 aa10.56□□□□□ -0.72
CCNE1-203ENST00000444983 D6R8Y8 96 aa10.55□□□□□ -0.72
CCNE1-203ENST00000444983 SMKR1H3BMG3 65 aa10.55□□□□□ -0.72
CCNE1-203ENST00000444983 H7C1H1 209 aa10.55□□□□□ -0.72
CCNE1-203ENST00000444983 RHOHQ15669 191 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms