RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 FAM231BA6NCW3 169 aa12.15□□□□□ -0.46
LIME1-202ENST00000444951 F5H768 121 aa12.15□□□□□ -0.46
LIME1-202ENST00000444951 RS1O15537 224 aa12.15□□□□□ -0.46
LIME1-202ENST00000444951 NXPH4O95158 308 aa12.15□□□□□ -0.46
LIME1-202ENST00000444951 FOXA3P55318 350 aaPredicted RBP12.15□□□□□ -0.46
LIME1-202ENST00000444951 FAM74A4Q5TZK3 123 aa12.15□□□□□ -0.46
LIME1-202ENST00000444951 CFAP126Q5VTH2 177 aa12.15□□□□□ -0.46
LIME1-202ENST00000444951 POM121L12Q8N7R1 296 aa12.15□□□□□ -0.46
LIME1-202ENST00000444951 SAMD10Q9BYL1 202 aa12.15□□□□□ -0.46
LIME1-202ENST00000444951 DEFB131BA0A096LNP1 70 aa12.14□□□□□ -0.47
LIME1-202ENST00000444951 TRAV10A0A0B4J240 114 aa12.14□□□□□ -0.47
LIME1-202ENST00000444951 TRAV4A0A0B4J268 109 aa12.14□□□□□ -0.47
LIME1-202ENST00000444951 A0A1B0GUT8 65 aa12.14□□□□□ -0.47
LIME1-202ENST00000444951 A8MWV9 139 aa12.14□□□□□ -0.47
LIME1-202ENST00000444951 ATRAIDQ6UW56 229 aa12.14□□□□□ -0.47
LIME1-202ENST00000444951 PHLDA1Q8WV24 401 aaPredicted RBP12.14□□□□□ -0.47
LIME1-202ENST00000444951 TRGV4A0A0C4DH28 118 aa12.13□□□□□ -0.47
LIME1-202ENST00000444951 LY6G6CO95867 125 aa12.13□□□□□ -0.47
LIME1-202ENST00000444951 HOXA5P20719 270 aa12.13□□□□□ -0.47
LIME1-202ENST00000444951 MRPL54Q6P161 138 aaKnown RBP12.13□□□□□ -0.47
LIME1-202ENST00000444951 C14orf178Q8N769 122 aaPredicted RBP12.13□□□□□ -0.47
LIME1-202ENST00000444951 AP1S3Q96PC3 154 aa12.13□□□□□ -0.47
LIME1-202ENST00000444951 URGCP-MRPS24S4R325 110 aa12.13□□□□□ -0.47
LIME1-202ENST00000444951 A0A087WWC5 75 aa12.12□□□□□ -0.47
LIME1-202ENST00000444951 SMIM17P0DL12 118 aa12.12□□□□□ -0.47
LIME1-202ENST00000444951 RIGQ13278 110 aa12.12□□□□□ -0.47
LIME1-202ENST00000444951 PIK3CD-AS1Q5SR53 167 aa12.12□□□□□ -0.47
LIME1-202ENST00000444951 WDR73Q6P4I2 378 aa12.12□□□□□ -0.47
LIME1-202ENST00000444951 NDUFAF3Q9BU61 184 aa12.12□□□□□ -0.47
LIME1-202ENST00000444951 HERC2O95714 4834 aa12.12□□□□□ -0.47
LIME1-202ENST00000444951 IGHV4-4A0A075B6R2 117 aa12.11□□□□□ -0.47
LIME1-202ENST00000444951 MGPP08493 103 aa12.11□□□□□ -0.47
LIME1-202ENST00000444951 TRGC1P0CF51 173 aa12.11□□□□□ -0.47
LIME1-202ENST00000444951 EVI2AP22794 236 aa12.11□□□□□ -0.47
LIME1-202ENST00000444951 KCNIP4Q6PIL6 250 aa12.11□□□□□ -0.47
LIME1-202ENST00000444951 CEMP1Q6PRD7 247 aaPredicted RBP12.11□□□□□ -0.47
LIME1-202ENST00000444951 C18orf15Q96N68 181 aa12.11□□□□□ -0.47
LIME1-202ENST00000444951 CNFNQ9BYD5 112 aa12.11□□□□□ -0.47
LIME1-202ENST00000444951 HECTD4Q9Y4D8 3996 aa12.11□□□□□ -0.47
LIME1-202ENST00000444951 A0A0J9YY99 117 aa12.1□□□□□ -0.47
LIME1-202ENST00000444951 F5H697 171 aa12.1□□□□□ -0.47
LIME1-202ENST00000444951 CRYGDP07320 174 aa12.1□□□□□ -0.47
LIME1-202ENST00000444951 S100PP25815 95 aa12.1□□□□□ -0.47
LIME1-202ENST00000444951 CAMPP49913 170 aa12.1□□□□□ -0.47
LIME1-202ENST00000444951 FHL2Q14192 279 aa12.1□□□□□ -0.47
LIME1-202ENST00000444951 ZNF56Q15929 161 aa12.1□□□□□ -0.47
LIME1-202ENST00000444951 SMIM15Q7Z3B0 74 aa12.1□□□□□ -0.47
LIME1-202ENST00000444951 NUPR2A6NF83 97 aa12.09□□□□□ -0.47
LIME1-202ENST00000444951 ATP6V1G1O75348 118 aa12.09□□□□□ -0.47
LIME1-202ENST00000444951 IMMP2LQ96T52 175 aa12.09□□□□□ -0.47
LIME1-202ENST00000444951 TMEM242Q9NWH2 141 aa12.09□□□□□ -0.47
LIME1-202ENST00000444951 TRAV26-1A0A087WT03 109 aa12.08□□□□□ -0.48
LIME1-202ENST00000444951 IGLL5B9A064 214 aa12.08□□□□□ -0.48
LIME1-202ENST00000444951 RHODO00212 210 aa12.08□□□□□ -0.48
LIME1-202ENST00000444951 TMEM88Q6PEY1 159 aa12.08□□□□□ -0.48
LIME1-202ENST00000444951 Q6ZSN1 163 aa12.08□□□□□ -0.48
LIME1-202ENST00000444951 HHLA3Q9XRX5 114 aa12.08□□□□□ -0.48
LIME1-202ENST00000444951 UFSP1Q6NVU6 142 aa12.07□□□□□ -0.48
LIME1-202ENST00000444951 ZFP2Q6ZN57 461 aa12.07□□□□□ -0.48
LIME1-202ENST00000444951 BTF3L4Q96K17 158 aa12.07□□□□□ -0.48
LIME1-202ENST00000444951 DPH3P1Q9H4G8 78 aa12.07□□□□□ -0.48
LIME1-202ENST00000444951 KIF25-AS1Q9Y6Z4 181 aa12.07□□□□□ -0.48
LIME1-202ENST00000444951 NACAE9PAV3 2078 aa12.06□□□□□ -0.48
LIME1-202ENST00000444951 PAX4O43316 350 aa12.06□□□□□ -0.48
LIME1-202ENST00000444951 GATA1P15976 413 aaPredicted RBP12.06□□□□□ -0.48
LIME1-202ENST00000444951 HBBP68871 147 aa12.06□□□□□ -0.48
LIME1-202ENST00000444951 CIDEAO60543 219 aa12.05□□□□□ -0.48
LIME1-202ENST00000444951 RAB4BP61018 213 aa12.05□□□□□ -0.48
LIME1-202ENST00000444951 CBLN2Q8IUK8 224 aa12.05□□□□□ -0.48
LIME1-202ENST00000444951 PRO0255Q9UI72 69 aa12.05□□□□□ -0.48
LIME1-202ENST00000444951 A0A1B0GW15 77 aa12.04□□□□□ -0.48
LIME1-202ENST00000444951 A0A1B0GXF2 115 aa12.04□□□□□ -0.48
LIME1-202ENST00000444951 CRYBA4P53673 196 aa12.04□□□□□ -0.48
LIME1-202ENST00000444951 LINC00315P59091 139 aa12.04□□□□□ -0.48
LIME1-202ENST00000444951 ATP5L2Q7Z4Y8 100 aa12.04□□□□□ -0.48
LIME1-202ENST00000444951 SLC25A29Q8N8R3 303 aa12.04□□□□□ -0.48
LIME1-202ENST00000444951 KLK5Q9Y337 293 aaPredicted RBP12.04□□□□□ -0.48
LIME1-202ENST00000444951 LOC100131303A0A0U1RQF7 123 aa12.03□□□□□ -0.48
LIME1-202ENST00000444951 NUDT3O95989 172 aa12.03□□□□□ -0.48
LIME1-202ENST00000444951 S100A8P05109 93 aa12.03□□□□□ -0.48
LIME1-202ENST00000444951 P0DMU3 169 aa12.03□□□□□ -0.48
LIME1-202ENST00000444951 FAM231AP0DMU4 169 aa12.03□□□□□ -0.48
LIME1-202ENST00000444951 FAM231CP0DMU5 169 aa12.03□□□□□ -0.48
LIME1-202ENST00000444951 SLAQ13239 276 aa12.03□□□□□ -0.48
LIME1-202ENST00000444951 AMN1Q8IY45 258 aa12.03□□□□□ -0.48
LIME1-202ENST00000444951 VSIG2Q96IQ7 327 aa12.03□□□□□ -0.48
LIME1-202ENST00000444951 TMEM191AQ9H0A3 160 aa12.03□□□□□ -0.48
LIME1-202ENST00000444951 TRAV9-1A0A075B6T8 112 aa12.02□□□□□ -0.49
LIME1-202ENST00000444951 TGIF2-C20orf24A0A0A6YYL0 155 aa12.02□□□□□ -0.49
LIME1-202ENST00000444951 TRAV26-2A0A0B4J265 109 aa12.02□□□□□ -0.49
LIME1-202ENST00000444951 K7EQD1 137 aa12.02□□□□□ -0.49
LIME1-202ENST00000444951 SCO1O75880 301 aa12.02□□□□□ -0.49
LIME1-202ENST00000444951 GYPEP15421 78 aa12.02□□□□□ -0.49
LIME1-202ENST00000444951 S100A1P23297 94 aa12.02□□□□□ -0.49
LIME1-202ENST00000444951 SUMO4Q6EEV6 95 aa12.02□□□□□ -0.49
LIME1-202ENST00000444951 PRADC1Q9BSG0 188 aa12.02□□□□□ -0.49
LIME1-202ENST00000444951 SMCO4Q9NRQ5 59 aa12.02□□□□□ -0.49
LIME1-202ENST00000444951 TRBV6-4A0A1B0GX49 114 aa12.01□□□□□ -0.49
LIME1-202ENST00000444951 ELOBQ15370 118 aa12.01□□□□□ -0.49
LIME1-202ENST00000444951 RHOHQ15669 191 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms