RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 GPN1Q9HCN4 374 aaPredicted RBP5.95□□□□□ -1.46
HDAC8-215ENST00000444609 MTFP1Q9UDX5 166 aa5.95□□□□□ -1.46
HDAC8-215ENST00000444609 STRAPQ9Y3F4 350 aaKnown RBP5.95□□□□□ -1.46
HDAC8-215ENST00000444609 NEBP20929 6669 aa5.94□□□□□ -1.46
HDAC8-215ENST00000444609 H3BP45 60 aa5.94□□□□□ -1.46
HDAC8-215ENST00000444609 SYNGR2O43760 224 aa5.94□□□□□ -1.46
HDAC8-215ENST00000444609 GZMBP10144 247 aa5.94□□□□□ -1.46
HDAC8-215ENST00000444609 UFSP1Q6NVU6 142 aa5.94□□□□□ -1.46
HDAC8-215ENST00000444609 C15orf56Q8N910 161 aa5.94□□□□□ -1.46
HDAC8-215ENST00000444609 ASB13Q8WXK3 278 aa5.94□□□□□ -1.46
HDAC8-215ENST00000444609 SCP2D1Q9UJQ7 156 aa5.94□□□□□ -1.46
HDAC8-215ENST00000444609 KCNIP3Q9Y2W7 256 aa5.94□□□□□ -1.46
HDAC8-215ENST00000444609 LENEPQ9Y5L5 61 aa5.94□□□□□ -1.46
HDAC8-215ENST00000444609 TRAV21A0A0B4J279 112 aa5.93□□□□□ -1.46
HDAC8-215ENST00000444609 RBAKDNA6NC62 111 aa5.93□□□□□ -1.46
HDAC8-215ENST00000444609 A8MWV9 139 aa5.93□□□□□ -1.46
HDAC8-215ENST00000444609 NDUFB6O95139 128 aa5.93□□□□□ -1.46
HDAC8-215ENST00000444609 AKAIN1P0CW23 69 aa5.93□□□□□ -1.46
HDAC8-215ENST00000444609 TBPP20226 339 aa5.93□□□□□ -1.46
HDAC8-215ENST00000444609 PKIAP61925 76 aa5.93□□□□□ -1.46
HDAC8-215ENST00000444609 TMEM229BQ8NBD8 167 aa5.93□□□□□ -1.46
HDAC8-215ENST00000444609 TMEM14CQ9P0S9 112 aa5.93□□□□□ -1.46
HDAC8-215ENST00000444609 GPR132Q9UNW8 380 aa5.93□□□□□ -1.46
HDAC8-215ENST00000444609 TRAV8-4A0A0B4J246 113 aa5.92□□□□□ -1.46
HDAC8-215ENST00000444609 A0A1W2PNN7 141 aa5.92□□□□□ -1.46
HDAC8-215ENST00000444609 FNDC10F2Z333 226 aa5.92□□□□□ -1.46
HDAC8-215ENST00000444609 SSNA1O43805 119 aa5.92□□□□□ -1.46
HDAC8-215ENST00000444609 P01737 135 aa5.92□□□□□ -1.46
HDAC8-215ENST00000444609 TAS2R19P59542 299 aa5.92□□□□□ -1.46
HDAC8-215ENST00000444609 UBE2D3P61077 147 aa5.92□□□□□ -1.46
HDAC8-215ENST00000444609 UBE2D2P62837 147 aa5.92□□□□□ -1.46
HDAC8-215ENST00000444609 RBX1P62877 108 aa5.92□□□□□ -1.46
HDAC8-215ENST00000444609 CYCSP99999 105 aaKnown RBP5.92□□□□□ -1.46
HDAC8-215ENST00000444609 REG3AQ06141 175 aa5.92□□□□□ -1.46
HDAC8-215ENST00000444609 Q5BKY6 102 aa5.92□□□□□ -1.46
HDAC8-215ENST00000444609 CHCHD5Q9BSY4 110 aa5.92□□□□□ -1.46
HDAC8-215ENST00000444609 PRSS47A8MTI9 375 aa5.91□□□□□ -1.46
HDAC8-215ENST00000444609 GIPP09681 153 aaPredicted RBP5.91□□□□□ -1.46
HDAC8-215ENST00000444609 PYYP10082 97 aa5.91□□□□□ -1.46
HDAC8-215ENST00000444609 RAB5CP51148 216 aa5.91□□□□□ -1.46
HDAC8-215ENST00000444609 CFAP161Q6P656 301 aa5.91□□□□□ -1.46
HDAC8-215ENST00000444609 C9orf62Q8N4C0 152 aa5.91□□□□□ -1.46
HDAC8-215ENST00000444609 SLC25A21Q9BQT8 299 aaPredicted RBP5.91□□□□□ -1.46
HDAC8-215ENST00000444609 MBD2Q9UBB5 411 aa5.91□□□□□ -1.46
HDAC8-215ENST00000444609 PKIGQ9Y2B9 76 aa5.91□□□□□ -1.46
HDAC8-215ENST00000444609 HSPB11Q9Y547 144 aa5.91□□□□□ -1.46
HDAC8-215ENST00000444609 SLC25A6P12236 298 aa5.9□□□□□ -1.46
HDAC8-215ENST00000444609 AMTP48728 403 aa5.9□□□□□ -1.46
HDAC8-215ENST00000444609 HIGD2BQ4VC39 106 aa5.9□□□□□ -1.46
HDAC8-215ENST00000444609 PRR27Q6MZM9 219 aa5.9□□□□□ -1.46
HDAC8-215ENST00000444609 Q6ZRG5 221 aa5.9□□□□□ -1.46
HDAC8-215ENST00000444609 C12orf45Q8N5I9 185 aaPredicted RBP5.9□□□□□ -1.46
HDAC8-215ENST00000444609 MGST2Q99735 147 aa5.9□□□□□ -1.46
HDAC8-215ENST00000444609 RPP21Q9H633 154 aaKnown RBP5.9□□□□□ -1.46
HDAC8-215ENST00000444609 JPT2Q9H910 190 aa5.9□□□□□ -1.46
HDAC8-215ENST00000444609 FLVCR2Q9UPI3 526 aa5.9□□□□□ -1.46
HDAC8-215ENST00000444609 DISC1C4P0D8 188 aa5.89□□□□□ -1.47
HDAC8-215ENST00000444609 SMLR1H3BR10 107 aa5.89□□□□□ -1.47
HDAC8-215ENST00000444609 RAB3DO95716 219 aa5.89□□□□□ -1.47
HDAC8-215ENST00000444609 RNASE3P12724 160 aaKnown RBP5.89□□□□□ -1.47
HDAC8-215ENST00000444609 RPL36AP83881 106 aaKnown RBP5.89□□□□□ -1.47
HDAC8-215ENST00000444609 LGALSLQ3ZCW2 172 aaPredicted RBP5.89□□□□□ -1.47
HDAC8-215ENST00000444609 PIK3CD-AS1Q5SR53 167 aa5.89□□□□□ -1.47
HDAC8-215ENST00000444609 XP32Q5T750 250 aa5.89□□□□□ -1.47
HDAC8-215ENST00000444609 OR1L4Q8NGR5 311 aa5.89□□□□□ -1.47
HDAC8-215ENST00000444609 RPL36ALQ969Q0 106 aaKnown RBP5.89□□□□□ -1.47
HDAC8-215ENST00000444609 PPDPFQ9H3Y8 114 aa5.89□□□□□ -1.47
HDAC8-215ENST00000444609 MGAT4CQ9UBM8 478 aa5.89□□□□□ -1.47
HDAC8-215ENST00000444609 TRBV7-3A0A075B6L6 115 aa5.88□□□□□ -1.47
HDAC8-215ENST00000444609 TRBV10-1A0A0K0K1A3 114 aa5.88□□□□□ -1.47
HDAC8-215ENST00000444609 HMSDA8MTL9 139 aa5.88□□□□□ -1.47
HDAC8-215ENST00000444609 SEC61BP60468 96 aaKnown RBP5.88□□□□□ -1.47
HDAC8-215ENST00000444609 RAB2AP61019 212 aa5.88□□□□□ -1.47
HDAC8-215ENST00000444609 TEX261Q6UWH6 196 aa5.88□□□□□ -1.47
HDAC8-215ENST00000444609 OR11H4Q8NGC9 324 aa5.88□□□□□ -1.47
HDAC8-215ENST00000444609 TMED6Q8WW62 240 aa5.88□□□□□ -1.47
HDAC8-215ENST00000444609 PRRT1Q99946 306 aa5.88□□□□□ -1.47
HDAC8-215ENST00000444609 SEC22CQ9BRL7 303 aa5.88□□□□□ -1.47
HDAC8-215ENST00000444609 C11orf21Q9P2W6 132 aa5.88□□□□□ -1.47
HDAC8-215ENST00000444609 LINC00862A6NCI5 91 aa5.87□□□□□ -1.47
HDAC8-215ENST00000444609 CSN1S1P47710 185 aa5.87□□□□□ -1.47
HDAC8-215ENST00000444609 PTTG1IPP53801 180 aa5.87□□□□□ -1.47
HDAC8-215ENST00000444609 SSTP61278 116 aa5.87□□□□□ -1.47
HDAC8-215ENST00000444609 EIF5AP63241 154 aaKnown RBP5.87□□□□□ -1.47
HDAC8-215ENST00000444609 FAAP20Q6NZ36 180 aa5.87□□□□□ -1.47
HDAC8-215ENST00000444609 PFDN5Q99471 154 aa5.87□□□□□ -1.47
HDAC8-215ENST00000444609 PSENENQ9NZ42 101 aa5.87□□□□□ -1.47
HDAC8-215ENST00000444609 GVQW2A0A096LPI5 108 aaPredicted RBP5.86□□□□□ -1.47
HDAC8-215ENST00000444609 DUXBA0A1W2PPF3 345 aa5.86□□□□□ -1.47
HDAC8-215ENST00000444609 F6UZH7 168 aa5.86□□□□□ -1.47
HDAC8-215ENST00000444609 G3V3Q6 166 aa5.86□□□□□ -1.47
HDAC8-215ENST00000444609 L7N2F9 121 aa5.86□□□□□ -1.47
HDAC8-215ENST00000444609 RHODO00212 210 aa5.86□□□□□ -1.47
HDAC8-215ENST00000444609 EIF3GO75821 320 aaKnown RBP eCLIP5.86□□□□□ -1.47
HDAC8-215ENST00000444609 NBEAP1P0C6P0 100 aa5.86□□□□□ -1.47
HDAC8-215ENST00000444609 S100A10P60903 97 aa5.86□□□□□ -1.47
HDAC8-215ENST00000444609 GAGE6Q13070 117 aa5.86□□□□□ -1.47
HDAC8-215ENST00000444609 CLLU1Q5K131 121 aa5.86□□□□□ -1.47
HDAC8-215ENST00000444609 MIC13Q5XKP0 118 aa5.86□□□□□ -1.47
HDAC8-215ENST00000444609 TMEM14EPQ6UXP3 125 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms