RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 SAMD10Q9BYL1 202 aa15.02■□□□□ -0
HDLBP-220ENST00000442730 RPL19P84098 196 aaKnown RBP15.01□□□□□ -0.01
HDLBP-220ENST00000442730 PHLDA3Q9Y5J5 127 aa15.01□□□□□ -0.01
HDLBP-220ENST00000442730 LRP1BQ9NZR2 4599 aa15.01□□□□□ -0.01
HDLBP-220ENST00000442730 TRAV9-2A0A087WT02 112 aa15□□□□□ -0.01
HDLBP-220ENST00000442730 C16orf90A8MZG2 172 aa15□□□□□ -0.01
HDLBP-220ENST00000442730 K7EP13 123 aa15□□□□□ -0.01
HDLBP-220ENST00000442730 LINC00694P0DN24 101 aa15□□□□□ -0.01
HDLBP-220ENST00000442730 EVI2AP22794 236 aa15□□□□□ -0.01
HDLBP-220ENST00000442730 TNFRSF18Q9Y5U5 241 aa15□□□□□ -0.01
HDLBP-220ENST00000442730 RHODO00212 210 aa14.99□□□□□ -0.01
HDLBP-220ENST00000442730 CEBPGP53567 150 aa14.99□□□□□ -0.01
HDLBP-220ENST00000442730 SPATA12Q7Z6I5 190 aa14.99□□□□□ -0.01
HDLBP-220ENST00000442730 M0R381 172 aa14.98□□□□□ -0.01
HDLBP-220ENST00000442730 CXCL1P09341 107 aa14.98□□□□□ -0.01
HDLBP-220ENST00000442730 ZFP82Q8N141 532 aa14.98□□□□□ -0.01
HDLBP-220ENST00000442730 BIN3Q9NQY0 253 aa14.98□□□□□ -0.01
HDLBP-220ENST00000442730 MSRB1Q9NZV6 116 aa14.98□□□□□ -0.01
HDLBP-220ENST00000442730 RYR1P21817 5038 aa14.98□□□□□ -0.01
HDLBP-220ENST00000442730 NDUFS6O75380 124 aaKnown RBP14.97□□□□□ -0.01
HDLBP-220ENST00000442730 CRYGDP07320 174 aa14.97□□□□□ -0.01
HDLBP-220ENST00000442730 NFE4Q86UQ8 179 aa14.97□□□□□ -0.01
HDLBP-220ENST00000442730 C14orf178Q8N769 122 aaPredicted RBP14.97□□□□□ -0.01
HDLBP-220ENST00000442730 ATP6V0E2Q8NHE4 81 aa14.97□□□□□ -0.01
HDLBP-220ENST00000442730 SFRP2Q96HF1 295 aa14.97□□□□□ -0.01
HDLBP-220ENST00000442730 A0A087WWL8 130 aa14.96□□□□□ -0.01
HDLBP-220ENST00000442730 IGHV3-38A0A0C4DH36 116 aa14.96□□□□□ -0.01
HDLBP-220ENST00000442730 KRTAP10-2P60368 255 aa14.96□□□□□ -0.01
HDLBP-220ENST00000442730 LINC01556Q5JQF7 62 aa14.96□□□□□ -0.01
HDLBP-220ENST00000442730 LELP1Q5T871 98 aa14.96□□□□□ -0.01
HDLBP-220ENST00000442730 FAM74A4Q5TZK3 123 aa14.96□□□□□ -0.01
HDLBP-220ENST00000442730 DAZAP1Q96EP5 407 aaKnown RBP14.96□□□□□ -0.01
HDLBP-220ENST00000442730 GTSF1LQ9H1H1 148 aa14.96□□□□□ -0.01
HDLBP-220ENST00000442730 Q9UF83 564 aa14.96□□□□□ -0.01
HDLBP-220ENST00000442730 TRAV8-6A0A0B4J262 113 aa14.95□□□□□ -0.02
HDLBP-220ENST00000442730 C19orf71A6NCJ1 209 aa14.95□□□□□ -0.02
HDLBP-220ENST00000442730 GAGE12JA6NER3 117 aa14.95□□□□□ -0.02
HDLBP-220ENST00000442730 GAGE1Q13065 139 aa14.95□□□□□ -0.02
HDLBP-220ENST00000442730 GAGE4Q13068 117 aa14.95□□□□□ -0.02
HDLBP-220ENST00000442730 GAGE5Q13069 117 aa14.95□□□□□ -0.02
HDLBP-220ENST00000442730 GAGE13Q4V321 117 aa14.95□□□□□ -0.02
HDLBP-220ENST00000442730 OR10J3Q5JRS4 329 aa14.95□□□□□ -0.02
HDLBP-220ENST00000442730 C10orf126Q8N4M7 172 aa14.95□□□□□ -0.02
HDLBP-220ENST00000442730 DNAH5Q8TE73 4624 aa14.95□□□□□ -0.02
HDLBP-220ENST00000442730 P01737 135 aa14.94□□□□□ -0.02
HDLBP-220ENST00000442730 SRP19P09132 144 aaKnown RBP14.94□□□□□ -0.02
HDLBP-220ENST00000442730 OR2D3Q8NGH3 330 aa14.94□□□□□ -0.02
HDLBP-220ENST00000442730 OR10AG1Q8NH19 301 aa14.94□□□□□ -0.02
HDLBP-220ENST00000442730 SMIM7Q9BQ49 75 aa14.94□□□□□ -0.02
HDLBP-220ENST00000442730 HSPG2P98160 4391 aa14.94□□□□□ -0.02
HDLBP-220ENST00000442730 K7EN84 100 aa14.93□□□□□ -0.02
HDLBP-220ENST00000442730 ERVFC1-1P60608 527 aa14.92□□□□□ -0.02
HDLBP-220ENST00000442730 RPS20P60866 119 aaKnown RBP14.92□□□□□ -0.02
HDLBP-220ENST00000442730 SNAI2O43623 268 aa14.91□□□□□ -0.02
HDLBP-220ENST00000442730 OCC1Q8TAD7 63 aa14.91□□□□□ -0.02
HDLBP-220ENST00000442730 SSBP4Q9BWG4 385 aaPredicted RBP14.91□□□□□ -0.02
HDLBP-220ENST00000442730 ZNF727A8MUV8 499 aa14.9□□□□□ -0.02
HDLBP-220ENST00000442730 OR5AL1P0C617 328 aa14.9□□□□□ -0.02
HDLBP-220ENST00000442730 GZMBP10144 247 aa14.9□□□□□ -0.02
HDLBP-220ENST00000442730 RAB14P61106 215 aa14.9□□□□□ -0.02
HDLBP-220ENST00000442730 PCLOQ9Y6V0 5065 aa14.9□□□□□ -0.02
HDLBP-220ENST00000442730 XKRY2A2RUG3 117 aa14.89□□□□□ -0.03
HDLBP-220ENST00000442730 PEA15Q15121 130 aa14.89□□□□□ -0.03
HDLBP-220ENST00000442730 RNASE7Q9H1E1 156 aaKnown RBP14.89□□□□□ -0.03
HDLBP-220ENST00000442730 APOBP04114 4563 aaKnown RBP14.89□□□□□ -0.03
HDLBP-220ENST00000442730 A0A087WTM6 91 aa14.88□□□□□ -0.03
HDLBP-220ENST00000442730 MUC21A0A0G2JKD1 596 aa14.88□□□□□ -0.03
HDLBP-220ENST00000442730 MUC21A0A140T8X8 626 aa14.88□□□□□ -0.03
HDLBP-220ENST00000442730 IBA57-AS1B1ANH7 110 aa14.88□□□□□ -0.03
HDLBP-220ENST00000442730 CDK2AP2O75956 126 aa14.88□□□□□ -0.03
HDLBP-220ENST00000442730 IGHV3-30P01768 117 aa14.88□□□□□ -0.03
HDLBP-220ENST00000442730 IGHV3-33P01772 117 aa14.88□□□□□ -0.03
HDLBP-220ENST00000442730 IGHV3-30-3P0DP02 117 aa14.88□□□□□ -0.03
HDLBP-220ENST00000442730 IGHV3-30-5P0DP03 117 aa14.88□□□□□ -0.03
HDLBP-220ENST00000442730 SRSF3P84103 164 aaKnown RBP14.88□□□□□ -0.03
HDLBP-220ENST00000442730 FER1L6-AS1Q8NA97 138 aa14.88□□□□□ -0.03
HDLBP-220ENST00000442730 NUDT10Q8NFP7 164 aa14.88□□□□□ -0.03
HDLBP-220ENST00000442730 NUDT11Q96G61 164 aa14.88□□□□□ -0.03
HDLBP-220ENST00000442730 TPPP3Q9BW30 176 aa14.88□□□□□ -0.03
HDLBP-220ENST00000442730 RPP21Q9H633 154 aaKnown RBP14.88□□□□□ -0.03
HDLBP-220ENST00000442730 TRBV10-1A0A0K0K1A3 114 aa14.87□□□□□ -0.03
HDLBP-220ENST00000442730 C9JQL5 133 aa14.87□□□□□ -0.03
HDLBP-220ENST00000442730 IGLC6P0CF74 106 aa14.87□□□□□ -0.03
HDLBP-220ENST00000442730 Q8N3U1 123 aa14.87□□□□□ -0.03
HDLBP-220ENST00000442730 A0A087WWC5 75 aa14.86□□□□□ -0.03
HDLBP-220ENST00000442730 EREGO14944 169 aa14.86□□□□□ -0.03
HDLBP-220ENST00000442730 SPANXN1Q5VSR9 72 aa14.86□□□□□ -0.03
HDLBP-220ENST00000442730 LINC01551Q86U37 167 aa14.86□□□□□ -0.03
HDLBP-220ENST00000442730 SMDT1Q9H4I9 107 aa14.86□□□□□ -0.03
HDLBP-220ENST00000442730 RAB4BP61018 213 aa14.84□□□□□ -0.03
HDLBP-220ENST00000442730 ZNF56Q15929 161 aa14.84□□□□□ -0.03
HDLBP-220ENST00000442730 FAM74A3Q4VXF1 159 aa14.84□□□□□ -0.03
HDLBP-220ENST00000442730 FAM231DQ6ZW35 169 aa14.84□□□□□ -0.03
HDLBP-220ENST00000442730 Q9HAA7 133 aa14.84□□□□□ -0.03
HDLBP-220ENST00000442730 FUSP35637 526 aaKnown RBP eCLIP14.83□□□□□ -0.04
HDLBP-220ENST00000442730 UBE2D3P61077 147 aa14.83□□□□□ -0.04
HDLBP-220ENST00000442730 UBE2D2P62837 147 aa14.83□□□□□ -0.04
HDLBP-220ENST00000442730 IFITM2Q01629 132 aa14.83□□□□□ -0.04
HDLBP-220ENST00000442730 LAGE3Q14657 143 aa14.83□□□□□ -0.04
HDLBP-220ENST00000442730 CLLU1Q5K131 121 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 213 ms