RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 ADIRFQ15847 76 aa11.1□□□□□ -0.63
USP39-205ENST00000442708 SPANXN1Q5VSR9 72 aa11.1□□□□□ -0.63
USP39-205ENST00000442708 ZFP2Q6ZN57 461 aa11.1□□□□□ -0.63
USP39-205ENST00000442708 OSTCQ9NRP0 149 aa11.1□□□□□ -0.63
USP39-205ENST00000442708 Q9UF83 564 aa11.1□□□□□ -0.63
USP39-205ENST00000442708 K7EQD1 137 aa11.09□□□□□ -0.63
USP39-205ENST00000442708 CIDEAO60543 219 aa11.09□□□□□ -0.63
USP39-205ENST00000442708 GYPEP15421 78 aa11.09□□□□□ -0.63
USP39-205ENST00000442708 FAM74A4Q5TZK3 123 aa11.09□□□□□ -0.63
USP39-205ENST00000442708 ICOSQ9Y6W8 199 aa11.09□□□□□ -0.63
USP39-205ENST00000442708 KIF25-AS1Q9Y6Z4 181 aa11.09□□□□□ -0.63
USP39-205ENST00000442708 V9GYV3 84 aa11.09□□□□□ -0.63
USP39-205ENST00000442708 BIRC6Q9NR09 4857 aa11.08□□□□□ -0.64
USP39-205ENST00000442708 TRBV6-4A0A1B0GX49 114 aa11.08□□□□□ -0.64
USP39-205ENST00000442708 A0A1W2PPQ1 181 aa11.08□□□□□ -0.64
USP39-205ENST00000442708 ESRGQ1W209 222 aa11.08□□□□□ -0.64
USP39-205ENST00000442708 CT83Q5H943 113 aa11.08□□□□□ -0.64
USP39-205ENST00000442708 C14orf178Q8N769 122 aaPredicted RBP11.08□□□□□ -0.64
USP39-205ENST00000442708 LINC00588Q9Y4M8 146 aa11.08□□□□□ -0.64
USP39-205ENST00000442708 A8MWL6 223 aa11.07□□□□□ -0.64
USP39-205ENST00000442708 F2Z2F3 143 aa11.07□□□□□ -0.64
USP39-205ENST00000442708 RHODO00212 210 aa11.07□□□□□ -0.64
USP39-205ENST00000442708 LINC00315P59091 139 aa11.07□□□□□ -0.64
USP39-205ENST00000442708 COMMD7Q86VX2 200 aa11.07□□□□□ -0.64
USP39-205ENST00000442708 LINC00862A6NCI5 91 aa11.06□□□□□ -0.64
USP39-205ENST00000442708 ADCYAP1P18509 176 aa11.06□□□□□ -0.64
USP39-205ENST00000442708 NTF3P20783 257 aa11.06□□□□□ -0.64
USP39-205ENST00000442708 CACNG7P62955 275 aa11.06□□□□□ -0.64
USP39-205ENST00000442708 MRPL23Q16540 153 aaKnown RBP11.06□□□□□ -0.64
USP39-205ENST00000442708 RNF212Q495C1 297 aa11.06□□□□□ -0.64
USP39-205ENST00000442708 UBE2DNLQ8IWF7 75 aa11.06□□□□□ -0.64
USP39-205ENST00000442708 OR10G8Q8NGN5 311 aa11.06□□□□□ -0.64
USP39-205ENST00000442708 PGLYRP4Q96LB8 373 aa11.06□□□□□ -0.64
USP39-205ENST00000442708 CNFNQ9BYD5 112 aa11.06□□□□□ -0.64
USP39-205ENST00000442708 FOXA3P55318 350 aaPredicted RBP11.05□□□□□ -0.64
USP39-205ENST00000442708 RHOHQ15669 191 aa11.05□□□□□ -0.64
USP39-205ENST00000442708 WDR73Q6P4I2 378 aa11.05□□□□□ -0.64
USP39-205ENST00000442708 UQCC3Q6UW78 93 aa11.05□□□□□ -0.64
USP39-205ENST00000442708 C15orf54Q8N8G6 183 aa11.05□□□□□ -0.64
USP39-205ENST00000442708 TSKUQ8WUA8 353 aa11.05□□□□□ -0.64
USP39-205ENST00000442708 KMT2AQ03164 3969 aa11.04□□□□□ -0.64
USP39-205ENST00000442708 CCL18P55774 89 aa11.04□□□□□ -0.64
USP39-205ENST00000442708 LYPD5Q6UWN5 251 aa11.04□□□□□ -0.64
USP39-205ENST00000442708 AP1S3Q96PC3 154 aa11.04□□□□□ -0.64
USP39-205ENST00000442708 PRADC1Q9BSG0 188 aa11.04□□□□□ -0.64
USP39-205ENST00000442708 DNAH6Q9C0G6 4158 aa11.04□□□□□ -0.64
USP39-205ENST00000442708 TMEM218A2RU14 115 aa11.03□□□□□ -0.64
USP39-205ENST00000442708 HIGD1CA8MV81 97 aa11.03□□□□□ -0.64
USP39-205ENST00000442708 LINC00694P0DN24 101 aa11.03□□□□□ -0.64
USP39-205ENST00000442708 EVI2AP22794 236 aa11.03□□□□□ -0.64
USP39-205ENST00000442708 SRIP30626 198 aa11.03□□□□□ -0.64
USP39-205ENST00000442708 NEGR1Q7Z3B1 354 aa11.03□□□□□ -0.64
USP39-205ENST00000442708 ZNRF2Q8NHG8 242 aa11.03□□□□□ -0.64
USP39-205ENST00000442708 GFRA4Q9GZZ7 299 aa11.03□□□□□ -0.64
USP39-205ENST00000442708 GAGE12JA6NER3 117 aa11.02□□□□□ -0.65
USP39-205ENST00000442708 RAB4BP61018 213 aa11.02□□□□□ -0.65
USP39-205ENST00000442708 GAGE1Q13065 139 aa11.02□□□□□ -0.65
USP39-205ENST00000442708 GAGE4Q13068 117 aa11.02□□□□□ -0.65
USP39-205ENST00000442708 GAGE5Q13069 117 aa11.02□□□□□ -0.65
USP39-205ENST00000442708 TWIST1Q15672 202 aa11.02□□□□□ -0.65
USP39-205ENST00000442708 ZNF56Q15929 161 aa11.02□□□□□ -0.65
USP39-205ENST00000442708 GAGE13Q4V321 117 aa11.02□□□□□ -0.65
USP39-205ENST00000442708 MRPS16Q9Y3D3 137 aaKnown RBP11.02□□□□□ -0.65
USP39-205ENST00000442708 IGLV2-18A0A075B6J9 118 aa11.01□□□□□ -0.65
USP39-205ENST00000442708 FAM231BA6NCW3 169 aa11.01□□□□□ -0.65
USP39-205ENST00000442708 SMIM27A0A1W2PRY6 76 aa11□□□□□ -0.65
USP39-205ENST00000442708 SMIM17P0DL12 118 aa11□□□□□ -0.65
USP39-205ENST00000442708 FAM3BP58499 235 aaPredicted RBP11□□□□□ -0.65
USP39-205ENST00000442708 NUP35Q8NFH5 326 aa11□□□□□ -0.65
USP39-205ENST00000442708 F5H697 171 aa10.99□□□□□ -0.65
USP39-205ENST00000442708 F8W036 122 aa10.99□□□□□ -0.65
USP39-205ENST00000442708 MGPP08493 103 aa10.99□□□□□ -0.65
USP39-205ENST00000442708 TRGC1P0CF51 173 aa10.99□□□□□ -0.65
USP39-205ENST00000442708 PNRC1Q12796 327 aaPredicted RBP10.99□□□□□ -0.65
USP39-205ENST00000442708 UPK3BQ9BT76 320 aa10.99□□□□□ -0.65
USP39-205ENST00000442708 DPH3P1Q9H4G8 78 aa10.99□□□□□ -0.65
USP39-205ENST00000442708 A0A1B0GUT8 65 aa10.98□□□□□ -0.65
USP39-205ENST00000442708 M0R2N4 97 aa10.98□□□□□ -0.65
USP39-205ENST00000442708 SUMO4Q6EEV6 95 aa10.98□□□□□ -0.65
USP39-205ENST00000442708 SH2D6Q7Z4S9 175 aa10.98□□□□□ -0.65
USP39-205ENST00000442708 NEXN-AS1Q8NBZ9 246 aa10.98□□□□□ -0.65
USP39-205ENST00000442708 ATP6V0E2Q8NHE4 81 aa10.98□□□□□ -0.65
USP39-205ENST00000442708 TRBV10-1A0A0K0K1A3 114 aa10.97□□□□□ -0.65
USP39-205ENST00000442708 M0QY20 66 aa10.97□□□□□ -0.65
USP39-205ENST00000442708 SEC11CQ9BY50 192 aa10.97□□□□□ -0.65
USP39-205ENST00000442708 Q9H8V8 135 aa10.97□□□□□ -0.65
USP39-205ENST00000442708 NAT8BQ9UHF3 227 aa10.97□□□□□ -0.65
USP39-205ENST00000442708 TIRAPP58753 221 aa10.96□□□□□ -0.65
USP39-205ENST00000442708 C10orf91Q5T1B1 145 aa10.96□□□□□ -0.65
USP39-205ENST00000442708 Q6ZR54 194 aa10.96□□□□□ -0.65
USP39-205ENST00000442708 TRAV26-2A0A0B4J265 109 aa10.95□□□□□ -0.66
USP39-205ENST00000442708 UBE2D3P61077 147 aa10.95□□□□□ -0.66
USP39-205ENST00000442708 UBE2D2P62837 147 aa10.95□□□□□ -0.66
USP39-205ENST00000442708 WFDC10BQ8IUB3 73 aa10.95□□□□□ -0.66
USP39-205ENST00000442708 BORCS7Q96B45 105 aa10.95□□□□□ -0.66
USP39-205ENST00000442708 KRTAP1-5Q9BYS1 174 aa10.95□□□□□ -0.66
USP39-205ENST00000442708 GTSF1LQ9H1H1 148 aa10.95□□□□□ -0.66
USP39-205ENST00000442708 TRBV7-3A0A075B6L6 115 aa10.94□□□□□ -0.66
USP39-205ENST00000442708 PPP1R2P9O14990 202 aa10.94□□□□□ -0.66
USP39-205ENST00000442708 MT-ND4LP03901 98 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms