RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 TMEM262E9PQX1 116 aa13.15□□□□□ -0.3
TMEM50B-204ENST00000442441 INMT-MINDY4F8WBC2 141 aa13.15□□□□□ -0.3
TMEM50B-204ENST00000442441 CRPP02741 224 aa13.15□□□□□ -0.3
TMEM50B-204ENST00000442441 ARMS2P0C7Q2 107 aa13.15□□□□□ -0.3
TMEM50B-204ENST00000442441 DNLZQ5SXM8 178 aa13.15□□□□□ -0.3
TMEM50B-204ENST00000442441 SFRP2Q96HF1 295 aa13.15□□□□□ -0.3
TMEM50B-204ENST00000442441 ARL2-SNX15V9GYD0 113 aa13.15□□□□□ -0.3
TMEM50B-204ENST00000442441 TRAV34A0A0B4J273 112 aa13.14□□□□□ -0.31
TMEM50B-204ENST00000442441 UBE2D3P61077 147 aa13.14□□□□□ -0.31
TMEM50B-204ENST00000442441 UBE2D2P62837 147 aa13.14□□□□□ -0.31
TMEM50B-204ENST00000442441 RPL36AP83881 106 aaKnown RBP13.14□□□□□ -0.31
TMEM50B-204ENST00000442441 DGAT2L7PQ6IED9 249 aa13.14□□□□□ -0.31
TMEM50B-204ENST00000442441 RPL36ALQ969Q0 106 aaKnown RBP13.14□□□□□ -0.31
TMEM50B-204ENST00000442441 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.14□□□□□ -0.31
TMEM50B-204ENST00000442441 LRP2P98164 4655 aa13.13□□□□□ -0.31
TMEM50B-204ENST00000442441 SSNA1O43805 119 aa13.13□□□□□ -0.31
TMEM50B-204ENST00000442441 PRSS1P07477 247 aa13.13□□□□□ -0.31
TMEM50B-204ENST00000442441 Q6ZRU5 148 aa13.13□□□□□ -0.31
TMEM50B-204ENST00000442441 C15orf54Q8N8G6 183 aa13.13□□□□□ -0.31
TMEM50B-204ENST00000442441 C9orf163Q8N9P6 203 aa13.13□□□□□ -0.31
TMEM50B-204ENST00000442441 TRBV7-3A0A075B6L6 115 aa13.12□□□□□ -0.31
TMEM50B-204ENST00000442441 KRBOX1C9JBD0 128 aa13.12□□□□□ -0.31
TMEM50B-204ENST00000442441 CXorf1O96002 111 aa13.12□□□□□ -0.31
TMEM50B-204ENST00000442441 HLA-DQA1P01909 254 aa13.12□□□□□ -0.31
TMEM50B-204ENST00000442441 HSD17B11Q8NBQ5 300 aa13.12□□□□□ -0.31
TMEM50B-204ENST00000442441 PHLDA3Q9Y5J5 127 aa13.12□□□□□ -0.31
TMEM50B-204ENST00000442441 TRBV6-8A0A0A6YYG3 113 aa13.11□□□□□ -0.31
TMEM50B-204ENST00000442441 A0A1W2PRE2 83 aa13.11□□□□□ -0.31
TMEM50B-204ENST00000442441 GRIFINA4D1Z8 144 aa13.11□□□□□ -0.31
TMEM50B-204ENST00000442441 M0R036 132 aa13.11□□□□□ -0.31
TMEM50B-204ENST00000442441 MPV17L2Q567V2 206 aa13.11□□□□□ -0.31
TMEM50B-204ENST00000442441 ZC2HC1AQ96GY0 325 aa13.11□□□□□ -0.31
TMEM50B-204ENST00000442441 PANO1I0J062 215 aa13.1□□□□□ -0.31
TMEM50B-204ENST00000442441 M0R381 172 aa13.1□□□□□ -0.31
TMEM50B-204ENST00000442441 MBP02144 154 aa13.1□□□□□ -0.31
TMEM50B-204ENST00000442441 ANGP03950 147 aaKnown RBP13.1□□□□□ -0.31
TMEM50B-204ENST00000442441 CRIP1P50238 77 aa13.1□□□□□ -0.31
TMEM50B-204ENST00000442441 LINC00299Q6ZSB3 139 aa13.1□□□□□ -0.31
TMEM50B-204ENST00000442441 Q86TA4 180 aa13.1□□□□□ -0.31
TMEM50B-204ENST00000442441 PSMG3Q9BT73 122 aaPredicted RBP13.1□□□□□ -0.31
TMEM50B-204ENST00000442441 NDUFA13Q9P0J0 144 aa13.1□□□□□ -0.31
TMEM50B-204ENST00000442441 A0A0D9SG52 128 aa13.09□□□□□ -0.31
TMEM50B-204ENST00000442441 TPT1P13693 172 aaKnown RBP13.09□□□□□ -0.31
TMEM50B-204ENST00000442441 MIAQ16674 131 aa13.09□□□□□ -0.31
TMEM50B-204ENST00000442441 OR10G8Q8NGN5 311 aa13.09□□□□□ -0.31
TMEM50B-204ENST00000442441 S100ZQ8WXG8 99 aa13.09□□□□□ -0.31
TMEM50B-204ENST00000442441 MARVELD1Q9BSK0 173 aa13.09□□□□□ -0.31
TMEM50B-204ENST00000442441 UPK1BO75841 260 aa13.08□□□□□ -0.32
TMEM50B-204ENST00000442441 IFNA7P01567 189 aa13.08□□□□□ -0.32
TMEM50B-204ENST00000442441 ATP6V0CP27449 155 aa13.08□□□□□ -0.32
TMEM50B-204ENST00000442441 SERF2P84101 59 aa13.08□□□□□ -0.32
TMEM50B-204ENST00000442441 SDIM1Q6ZPB5 146 aa13.08□□□□□ -0.32
TMEM50B-204ENST00000442441 ACTR3CQ9C0K3 210 aaPredicted RBP13.08□□□□□ -0.32
TMEM50B-204ENST00000442441 TNXBP22105 4242 aa13.08□□□□□ -0.32
TMEM50B-204ENST00000442441 PEX7O00628 323 aa13.07□□□□□ -0.32
TMEM50B-204ENST00000442441 SH2D1AO60880 128 aa13.07□□□□□ -0.32
TMEM50B-204ENST00000442441 RPL19P84098 196 aaKnown RBP13.07□□□□□ -0.32
TMEM50B-204ENST00000442441 ZFP82Q8N141 532 aa13.07□□□□□ -0.32
TMEM50B-204ENST00000442441 PKIAP61925 76 aa13.06□□□□□ -0.32
TMEM50B-204ENST00000442441 FAM162BQ5T6X4 162 aa13.06□□□□□ -0.32
TMEM50B-204ENST00000442441 COX8CQ7Z4L0 72 aa13.06□□□□□ -0.32
TMEM50B-204ENST00000442441 CHCHD5Q9BSY4 110 aa13.06□□□□□ -0.32
TMEM50B-204ENST00000442441 TNFSF18Q9UNG2 199 aa13.06□□□□□ -0.32
TMEM50B-204ENST00000442441 PTTG1O95997 202 aa13.05□□□□□ -0.32
TMEM50B-204ENST00000442441 IFITM3Q01628 133 aa13.05□□□□□ -0.32
TMEM50B-204ENST00000442441 TMSB15BA0A087X1C1 80 aa13.04□□□□□ -0.32
TMEM50B-204ENST00000442441 RAB4BP61018 213 aa13.04□□□□□ -0.32
TMEM50B-204ENST00000442441 CIRBPQ14011 172 aaKnown RBP13.04□□□□□ -0.32
TMEM50B-204ENST00000442441 LINC01559Q495D7 138 aa13.04□□□□□ -0.32
TMEM50B-204ENST00000442441 KRTAP26-1Q6PEX3 210 aa13.04□□□□□ -0.32
TMEM50B-204ENST00000442441 NEXN-AS1Q8NBZ9 246 aa13.04□□□□□ -0.32
TMEM50B-204ENST00000442441 HIST1H2BAQ96A08 127 aa13.04□□□□□ -0.32
TMEM50B-204ENST00000442441 PRR34Q9NV39 138 aa13.04□□□□□ -0.32
TMEM50B-204ENST00000442441 ZFP30Q9Y2G7 519 aa13.04□□□□□ -0.32
TMEM50B-204ENST00000442441 UBE2G2P60604 165 aa13.03□□□□□ -0.32
TMEM50B-204ENST00000442441 ZNF674Q2M3X9 581 aa13.02□□□□□ -0.33
TMEM50B-204ENST00000442441 PRR27Q6MZM9 219 aa13.02□□□□□ -0.33
TMEM50B-204ENST00000442441 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.02□□□□□ -0.33
TMEM50B-204ENST00000442441 CLRN3Q8NCR9 226 aa13.02□□□□□ -0.33
TMEM50B-204ENST00000442441 NKX6-2Q9C056 277 aaPredicted RBP13.02□□□□□ -0.33
TMEM50B-204ENST00000442441 ZNF56Q15929 161 aa13.01□□□□□ -0.33
TMEM50B-204ENST00000442441 CLPSL2Q6UWE3 100 aa13.01□□□□□ -0.33
TMEM50B-204ENST00000442441 FAM74A7A6NL05 159 aa13□□□□□ -0.33
TMEM50B-204ENST00000442441 CNBPP62633 177 aaKnown RBP13□□□□□ -0.33
TMEM50B-204ENST00000442441 RBX1P62877 108 aa13□□□□□ -0.33
TMEM50B-204ENST00000442441 ZNF726P1Q15940 193 aa13□□□□□ -0.33
TMEM50B-204ENST00000442441 LINC00269Q8N2A0 174 aa13□□□□□ -0.33
TMEM50B-204ENST00000442441 FMC1Q96HJ9 113 aa13□□□□□ -0.33
TMEM50B-204ENST00000442441 TMEM97Q5BJF2 176 aa12.99□□□□□ -0.33
TMEM50B-204ENST00000442441 NTM-AS1Q6ZSK4 140 aa12.99□□□□□ -0.33
TMEM50B-204ENST00000442441 DPH3Q96FX2 82 aa12.99□□□□□ -0.33
TMEM50B-204ENST00000442441 AQP10Q96PS8 301 aa12.99□□□□□ -0.33
TMEM50B-204ENST00000442441 CTXND1A0A1B0GTU2 59 aa12.98□□□□□ -0.33
TMEM50B-204ENST00000442441 UBE2G1P62253 170 aa12.98□□□□□ -0.33
TMEM50B-204ENST00000442441 RNF185Q96GF1 192 aa12.98□□□□□ -0.33
TMEM50B-204ENST00000442441 GAGE6Q13070 117 aa12.97□□□□□ -0.33
TMEM50B-204ENST00000442441 DPH3P1Q9H4G8 78 aa12.97□□□□□ -0.33
TMEM50B-204ENST00000442441 VAX2Q9UIW0 290 aa12.97□□□□□ -0.33
TMEM50B-204ENST00000442441 IGHV3-64A0A075B6Q5 118 aa12.96□□□□□ -0.33
TMEM50B-204ENST00000442441 A0A087WYN8 130 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms