RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 CCL24O00175 119 aa6.1□□□□□ -1.43
CCDC39-201ENST00000442201 IGLV2-8P01709 118 aa6.1□□□□□ -1.43
CCDC39-201ENST00000442201 TMEM75Q8N9X5 138 aa6.1□□□□□ -1.43
CCDC39-201ENST00000442201 TRAV8-2A0A0B4J237 113 aa6.1□□□□□ -1.43
CCDC39-201ENST00000442201 GAGE13Q4V321 117 aa6.1□□□□□ -1.43
CCDC39-201ENST00000442201 LINC00173Q6ZV60 143 aa6.1□□□□□ -1.43
CCDC39-201ENST00000442201 PRNTQ86SH4 94 aa6.1□□□□□ -1.43
CCDC39-201ENST00000442201 Q86TA4 180 aa6.1□□□□□ -1.43
CCDC39-201ENST00000442201 RNF182Q8N6D2 247 aa6.1□□□□□ -1.43
CCDC39-201ENST00000442201 DLX4Q92988 240 aaPredicted RBP6.1□□□□□ -1.43
CCDC39-201ENST00000442201 MRPL53Q96EL3 112 aaKnown RBP6.1□□□□□ -1.43
CCDC39-201ENST00000442201 TRBV6-1A0A0K0K1D8 114 aa6.09□□□□□ -1.43
CCDC39-201ENST00000442201 LEPROTL1O95214 131 aa6.09□□□□□ -1.43
CCDC39-201ENST00000442201 APOMO95445 188 aa6.09□□□□□ -1.43
CCDC39-201ENST00000442201 LTAP01374 205 aa6.09□□□□□ -1.43
CCDC39-201ENST00000442201 IGLV2-11P01706 119 aa6.09□□□□□ -1.43
CCDC39-201ENST00000442201 MAP1LC3AQ9H492 121 aa6.09□□□□□ -1.43
CCDC39-201ENST00000442201 HIGD1BQ9P298 99 aa6.09□□□□□ -1.43
CCDC39-201ENST00000442201 IGKV2-40A0A087WW87 121 aaPredicted RBP6.09□□□□□ -1.43
CCDC39-201ENST00000442201 IGKV2D-40P01614 121 aaPredicted RBP6.09□□□□□ -1.43
CCDC39-201ENST00000442201 PRB4P10163 310 aaPredicted RBP6.09□□□□□ -1.43
CCDC39-201ENST00000442201 RNASEKQ6P5S7 137 aaKnown RBP6.09□□□□□ -1.43
CCDC39-201ENST00000442201 PRELID3AQ96N28 172 aa6.09□□□□□ -1.43
CCDC39-201ENST00000442201 MLST8Q9BVC4 326 aa6.09□□□□□ -1.43
CCDC39-201ENST00000442201 MAP1LC3CQ9BXW4 147 aa6.09□□□□□ -1.43
CCDC39-201ENST00000442201 C2CD3Q4AC94 2353 aa6.09□□□□□ -1.44
CCDC39-201ENST00000442201 SOCS3O14543 225 aa6.08□□□□□ -1.44
CCDC39-201ENST00000442201 RBAKDNA6NC62 111 aa6.08□□□□□ -1.44
CCDC39-201ENST00000442201 TCTAP57738 103 aa6.08□□□□□ -1.44
CCDC39-201ENST00000442201 NFE4Q86UQ8 179 aa6.08□□□□□ -1.44
CCDC39-201ENST00000442201 RASL10AQ92737 203 aa6.08□□□□□ -1.44
CCDC39-201ENST00000442201 A0A1B0GX51 115 aa6.07□□□□□ -1.44
CCDC39-201ENST00000442201 IGLL5B9A064 214 aa6.07□□□□□ -1.44
CCDC39-201ENST00000442201 PRAC2D3DTV9 90 aa6.07□□□□□ -1.44
CCDC39-201ENST00000442201 NSUN5P1Q3KNT7 163 aa6.07□□□□□ -1.44
CCDC39-201ENST00000442201 IBA57Q5T440 356 aaKnown RBP6.07□□□□□ -1.44
CCDC39-201ENST00000442201 GDF5OSQ5U4N7 250 aa6.07□□□□□ -1.44
CCDC39-201ENST00000442201 NDUFA11Q86Y39 141 aa6.07□□□□□ -1.44
CCDC39-201ENST00000442201 WFDC3Q8IUB2 231 aa6.07□□□□□ -1.44
CCDC39-201ENST00000442201 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.07□□□□□ -1.44
CCDC39-201ENST00000442201 RNASE7Q9H1E1 156 aaKnown RBP6.07□□□□□ -1.44
CCDC39-201ENST00000442201 CFAP126Q5VTH2 177 aa6.07□□□□□ -1.44
CCDC39-201ENST00000442201 MRAPQ8TCY5 172 aa6.07□□□□□ -1.44
CCDC39-201ENST00000442201 DYNLRB2Q8TF09 96 aa6.07□□□□□ -1.44
CCDC39-201ENST00000442201 DCANP1Q8TF63 244 aa6.07□□□□□ -1.44
CCDC39-201ENST00000442201 LINC01587Q99440 93 aa6.07□□□□□ -1.44
CCDC39-201ENST00000442201 CUBNO60494 3623 aa6.07□□□□□ -1.44
CCDC39-201ENST00000442201 JMJD1CQ15652 2540 aa6.07□□□□□ -1.44
CCDC39-201ENST00000442201 ADARB2-AS1A8MUL3 147 aa6.07□□□□□ -1.44
CCDC39-201ENST00000442201 OVOL1O14753 267 aa6.07□□□□□ -1.44
CCDC39-201ENST00000442201 CSN3P07498 182 aa6.07□□□□□ -1.44
CCDC39-201ENST00000442201 IFITM1P13164 125 aa6.07□□□□□ -1.44
CCDC39-201ENST00000442201 FAM231DQ6ZW35 169 aa6.07□□□□□ -1.44
CCDC39-201ENST00000442201 C20orf173Q96LM9 149 aa6.07□□□□□ -1.44
CCDC39-201ENST00000442201 SMCPP49901 116 aaPredicted RBP6.06□□□□□ -1.44
CCDC39-201ENST00000442201 KRTAP10-3P60369 221 aa6.06□□□□□ -1.44
CCDC39-201ENST00000442201 Q8TAT8 98 aa6.06□□□□□ -1.44
CCDC39-201ENST00000442201 PRR25Q96S07 402 aa6.06□□□□□ -1.44
CCDC39-201ENST00000442201 TMEM262E9PQX1 116 aa6.06□□□□□ -1.44
CCDC39-201ENST00000442201 SNRPD3P62318 126 aaKnown RBP6.06□□□□□ -1.44
CCDC39-201ENST00000442201 ERCC8Q13216 396 aa6.06□□□□□ -1.44
CCDC39-201ENST00000442201 RBPMS2Q6ZRY4 209 aaKnown RBP6.06□□□□□ -1.44
CCDC39-201ENST00000442201 ASCL2Q99929 193 aa6.06□□□□□ -1.44
CCDC39-201ENST00000442201 ZNF492Q9P255 531 aa6.06□□□□□ -1.44
CCDC39-201ENST00000442201 A0A1B0GXF2 115 aa6.05□□□□□ -1.44
CCDC39-201ENST00000442201 K7EQG2 157 aa6.05□□□□□ -1.44
CCDC39-201ENST00000442201 FXYD2P54710 66 aa6.05□□□□□ -1.44
CCDC39-201ENST00000442201 FAM159AQ6UWV7 190 aa6.05□□□□□ -1.44
CCDC39-201ENST00000442201 C9orf47Q6ZRZ4 202 aa6.05□□□□□ -1.44
CCDC39-201ENST00000442201 ATP5L2Q7Z4Y8 100 aa6.05□□□□□ -1.44
CCDC39-201ENST00000442201 OR10J6PQ8NGY7 276 aa6.05□□□□□ -1.44
CCDC39-201ENST00000442201 PPDPFLQ8WWR9 84 aa6.05□□□□□ -1.44
CCDC39-201ENST00000442201 AGPAT4-IT1Q9H0P7 198 aa6.05□□□□□ -1.44
CCDC39-201ENST00000442201 ZNF138P52744 262 aa6.05□□□□□ -1.44
CCDC39-201ENST00000442201 RPS28P62857 69 aaKnown RBP6.05□□□□□ -1.44
CCDC39-201ENST00000442201 MEIG1Q5JSS6 88 aa6.05□□□□□ -1.44
CCDC39-201ENST00000442201 A0A1B0GWB2 263 aa6.05□□□□□ -1.44
CCDC39-201ENST00000442201 P01737 135 aa6.05□□□□□ -1.44
CCDC39-201ENST00000442201 ZNF688P0C7X2 276 aa6.05□□□□□ -1.44
CCDC39-201ENST00000442201 DEFB114Q30KQ6 69 aa6.05□□□□□ -1.44
CCDC39-201ENST00000442201 LINC00322Q6ZN03 302 aaPredicted RBP6.05□□□□□ -1.44
CCDC39-201ENST00000442201 TMEM61Q8N0U2 210 aa6.05□□□□□ -1.44
CCDC39-201ENST00000442201 KIR2DL5BQ8NHK3 375 aa6.05□□□□□ -1.44
CCDC39-201ENST00000442201 CARD19Q96LW7 228 aa6.05□□□□□ -1.44
CCDC39-201ENST00000442201 NIPBLQ6KC79 2804 aaeCLIP6.04□□□□□ -1.44
CCDC39-201ENST00000442201 C19orf71A6NCJ1 209 aa6.04□□□□□ -1.44
CCDC39-201ENST00000442201 PSMG4Q5JS54 123 aa6.04□□□□□ -1.44
CCDC39-201ENST00000442201 COX8CQ7Z4L0 72 aa6.04□□□□□ -1.44
CCDC39-201ENST00000442201 OR8A1Q8NGG7 326 aa6.04□□□□□ -1.44
CCDC39-201ENST00000442201 LINC00477Q96M19 166 aa6.04□□□□□ -1.44
CCDC39-201ENST00000442201 C8orf49Q96NF6 230 aa6.04□□□□□ -1.44
CCDC39-201ENST00000442201 TRAV2A0A0B4J234 112 aa6.04□□□□□ -1.44
CCDC39-201ENST00000442201 SPINK4O60575 86 aa6.04□□□□□ -1.44
CCDC39-201ENST00000442201 PF4P02776 101 aa6.04□□□□□ -1.44
CCDC39-201ENST00000442201 SBSPONQ8IVN8 264 aa6.04□□□□□ -1.44
CCDC39-201ENST00000442201 NPIPB6E9PJ23 425 aa6.03□□□□□ -1.44
CCDC39-201ENST00000442201 ASIPP42127 132 aa6.03□□□□□ -1.44
CCDC39-201ENST00000442201 GAGE2BQ13066 116 aa6.03□□□□□ -1.44
CCDC39-201ENST00000442201 LGALS9BQ3B8N2 356 aa6.03□□□□□ -1.44
CCDC39-201ENST00000442201 GAGE2EQ4V326 116 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms