RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 TNP2Q05952 138 aa12.5□□□□□ -0.41
SMPD4-210ENST00000441135 LYPD5Q6UWN5 251 aa12.5□□□□□ -0.41
SMPD4-210ENST00000441135 EIF5A2Q9GZV4 153 aaKnown RBP12.5□□□□□ -0.41
SMPD4-210ENST00000441135 LY96Q9Y6Y9 160 aa12.5□□□□□ -0.41
SMPD4-210ENST00000441135 M0R381 172 aa12.49□□□□□ -0.41
SMPD4-210ENST00000441135 OR2D3Q8NGH3 330 aa12.49□□□□□ -0.41
SMPD4-210ENST00000441135 KRTAP1-5Q9BYS1 174 aa12.49□□□□□ -0.41
SMPD4-210ENST00000441135 PKD1P98161 4303 aa12.49□□□□□ -0.41
SMPD4-210ENST00000441135 IGHV3-73A0A0B4J1V6 119 aa12.48□□□□□ -0.41
SMPD4-210ENST00000441135 CRYGDP07320 174 aa12.48□□□□□ -0.41
SMPD4-210ENST00000441135 IGLC6P0CF74 106 aa12.48□□□□□ -0.41
SMPD4-210ENST00000441135 OR10AG1Q8NH19 301 aa12.48□□□□□ -0.41
SMPD4-210ENST00000441135 SAMD10Q9BYL1 202 aa12.48□□□□□ -0.41
SMPD4-210ENST00000441135 JPT2Q9H910 190 aa12.48□□□□□ -0.41
SMPD4-210ENST00000441135 DYNC1H1Q14204 4646 aaKnown RBP12.47□□□□□ -0.41
SMPD4-210ENST00000441135 LOC100131303A0A0U1RQF7 123 aa12.47□□□□□ -0.41
SMPD4-210ENST00000441135 OCC1Q8TAD7 63 aa12.47□□□□□ -0.41
SMPD4-210ENST00000441135 K7EN84 100 aa12.46□□□□□ -0.41
SMPD4-210ENST00000441135 K7EP13 123 aa12.46□□□□□ -0.41
SMPD4-210ENST00000441135 LINC00694P0DN24 101 aa12.46□□□□□ -0.41
SMPD4-210ENST00000441135 SPANXN1Q5VSR9 72 aa12.46□□□□□ -0.41
SMPD4-210ENST00000441135 FER1L6-AS1Q8NA97 138 aa12.46□□□□□ -0.41
SMPD4-210ENST00000441135 NUDT10Q8NFP7 164 aa12.46□□□□□ -0.41
SMPD4-210ENST00000441135 NUDT11Q96G61 164 aa12.46□□□□□ -0.41
SMPD4-210ENST00000441135 SMDT1Q9H4I9 107 aa12.46□□□□□ -0.41
SMPD4-210ENST00000441135 F2Z2F3 143 aa12.45□□□□□ -0.42
SMPD4-210ENST00000441135 SIVA1O15304 175 aa12.45□□□□□ -0.42
SMPD4-210ENST00000441135 SRP19P09132 144 aaKnown RBP12.45□□□□□ -0.42
SMPD4-210ENST00000441135 CACNG7P62955 275 aa12.45□□□□□ -0.42
SMPD4-210ENST00000441135 Q6ZSN1 163 aa12.45□□□□□ -0.42
SMPD4-210ENST00000441135 FAM231DQ6ZW35 169 aa12.45□□□□□ -0.42
SMPD4-210ENST00000441135 TRBV10-1A0A0K0K1A3 114 aa12.44□□□□□ -0.42
SMPD4-210ENST00000441135 FAM74A4Q5TZK3 123 aa12.44□□□□□ -0.42
SMPD4-210ENST00000441135 WDR73Q6P4I2 378 aa12.44□□□□□ -0.42
SMPD4-210ENST00000441135 SMIM7Q9BQ49 75 aa12.44□□□□□ -0.42
SMPD4-210ENST00000441135 RPP21Q9H633 154 aaKnown RBP12.44□□□□□ -0.42
SMPD4-210ENST00000441135 A0A087WWL8 130 aa12.43□□□□□ -0.42
SMPD4-210ENST00000441135 C16orf90A8MZG2 172 aa12.43□□□□□ -0.42
SMPD4-210ENST00000441135 RAB4BP61018 213 aa12.43□□□□□ -0.42
SMPD4-210ENST00000441135 FAM74A3Q4VXF1 159 aa12.43□□□□□ -0.42
SMPD4-210ENST00000441135 AP1S3Q96PC3 154 aa12.43□□□□□ -0.42
SMPD4-210ENST00000441135 GZMBP10144 247 aa12.42□□□□□ -0.42
SMPD4-210ENST00000441135 CTRLP40313 264 aa12.42□□□□□ -0.42
SMPD4-210ENST00000441135 CT83Q5H943 113 aa12.42□□□□□ -0.42
SMPD4-210ENST00000441135 C14orf178Q8N769 122 aaPredicted RBP12.42□□□□□ -0.42
SMPD4-210ENST00000441135 ATP6V0E2Q8NHE4 81 aa12.42□□□□□ -0.42
SMPD4-210ENST00000441135 CNFNQ9BYD5 112 aa12.42□□□□□ -0.42
SMPD4-210ENST00000441135 RNASE7Q9H1E1 156 aaKnown RBP12.42□□□□□ -0.42
SMPD4-210ENST00000441135 GTSF1LQ9H1H1 148 aa12.42□□□□□ -0.42
SMPD4-210ENST00000441135 ZNF727A8MUV8 499 aa12.41□□□□□ -0.42
SMPD4-210ENST00000441135 CEBPGP53567 150 aa12.41□□□□□ -0.42
SMPD4-210ENST00000441135 PEA15Q15121 130 aa12.41□□□□□ -0.42
SMPD4-210ENST00000441135 LINC01551Q86U37 167 aa12.41□□□□□ -0.42
SMPD4-210ENST00000441135 DNAH10OSP0CZ25 163 aa12.4□□□□□ -0.42
SMPD4-210ENST00000441135 LINC00315P59091 139 aa12.4□□□□□ -0.42
SMPD4-210ENST00000441135 LELP1Q5T871 98 aa12.4□□□□□ -0.42
SMPD4-210ENST00000441135 OR10G8Q8NGN5 311 aa12.4□□□□□ -0.42
SMPD4-210ENST00000441135 KIF25-AS1Q9Y6Z4 181 aa12.4□□□□□ -0.42
SMPD4-210ENST00000441135 SMIM17P0DL12 118 aa12.39□□□□□ -0.43
SMPD4-210ENST00000441135 TPPP3Q9BW30 176 aa12.39□□□□□ -0.43
SMPD4-210ENST00000441135 TRAV9-2A0A087WT02 112 aa12.38□□□□□ -0.43
SMPD4-210ENST00000441135 A0A087WWC5 75 aa12.38□□□□□ -0.43
SMPD4-210ENST00000441135 TRAV8-6A0A0B4J262 113 aa12.38□□□□□ -0.43
SMPD4-210ENST00000441135 MUC21A0A0G2JKD1 596 aa12.38□□□□□ -0.43
SMPD4-210ENST00000441135 MUC21A0A140T8X8 626 aa12.38□□□□□ -0.43
SMPD4-210ENST00000441135 GAGE12JA6NER3 117 aa12.38□□□□□ -0.43
SMPD4-210ENST00000441135 A8MWL6 223 aa12.38□□□□□ -0.43
SMPD4-210ENST00000441135 GATCO43716 136 aaKnown RBP12.38□□□□□ -0.43
SMPD4-210ENST00000441135 TRGC1P0CF51 173 aa12.38□□□□□ -0.43
SMPD4-210ENST00000441135 RPL36AP83881 106 aaKnown RBP12.38□□□□□ -0.43
SMPD4-210ENST00000441135 GAGE1Q13065 139 aa12.38□□□□□ -0.43
SMPD4-210ENST00000441135 GAGE4Q13068 117 aa12.38□□□□□ -0.43
SMPD4-210ENST00000441135 GAGE5Q13069 117 aa12.38□□□□□ -0.43
SMPD4-210ENST00000441135 ZNF56Q15929 161 aa12.38□□□□□ -0.43
SMPD4-210ENST00000441135 GAGE13Q4V321 117 aa12.38□□□□□ -0.43
SMPD4-210ENST00000441135 LYZL1Q6UWQ5 148 aa12.38□□□□□ -0.43
SMPD4-210ENST00000441135 WFDC10BQ8IUB3 73 aa12.38□□□□□ -0.43
SMPD4-210ENST00000441135 RPL36ALQ969Q0 106 aaKnown RBP12.38□□□□□ -0.43
SMPD4-210ENST00000441135 FOXA3P55318 350 aaPredicted RBP12.37□□□□□ -0.43
SMPD4-210ENST00000441135 ERVFC1-1P60608 527 aa12.37□□□□□ -0.43
SMPD4-210ENST00000441135 C10orf126Q8N4M7 172 aa12.37□□□□□ -0.43
SMPD4-210ENST00000441135 OSTCQ9NRP0 149 aa12.37□□□□□ -0.43
SMPD4-210ENST00000441135 PCLOQ9Y6V0 5065 aa12.37□□□□□ -0.43
SMPD4-210ENST00000441135 TRBV7-3A0A075B6L6 115 aa12.36□□□□□ -0.43
SMPD4-210ENST00000441135 IGHV3-38A0A0C4DH36 116 aa12.36□□□□□ -0.43
SMPD4-210ENST00000441135 C9JQL5 133 aa12.36□□□□□ -0.43
SMPD4-210ENST00000441135 EVI2AP22794 236 aa12.36□□□□□ -0.43
SMPD4-210ENST00000441135 RAB14P61106 215 aa12.36□□□□□ -0.43
SMPD4-210ENST00000441135 TMEM241Q24JQ0 296 aa12.36□□□□□ -0.43
SMPD4-210ENST00000441135 LINC01556Q5JQF7 62 aa12.36□□□□□ -0.43
SMPD4-210ENST00000441135 Q6ZRN7 208 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-210ENST00000441135 SPATA12Q7Z6I5 190 aa12.36□□□□□ -0.43
SMPD4-210ENST00000441135 KRTAP17-1Q9BYP8 105 aa12.36□□□□□ -0.43
SMPD4-210ENST00000441135 Q9UF83 564 aa12.36□□□□□ -0.43
SMPD4-210ENST00000441135 FAM231BA6NCW3 169 aa12.35□□□□□ -0.43
SMPD4-210ENST00000441135 CDK2AP2O75956 126 aa12.35□□□□□ -0.43
SMPD4-210ENST00000441135 UBE2D3P61077 147 aa12.35□□□□□ -0.43
SMPD4-210ENST00000441135 UBE2D2P62837 147 aa12.35□□□□□ -0.43
SMPD4-210ENST00000441135 NFE4Q86UQ8 179 aa12.35□□□□□ -0.43
SMPD4-210ENST00000441135 GTSF1Q8WW33 167 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms