RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 ZNF705GA8MUZ8 300 aaPredicted RBP3.39□□□□□ -1.87
PTPN4-206ENST00000441089 B4DEV8 164 aa3.39□□□□□ -1.87
PTPN4-206ENST00000441089 H7BYZ3 331 aa3.39□□□□□ -1.87
PTPN4-206ENST00000441089 GATCO43716 136 aaKnown RBP3.39□□□□□ -1.87
PTPN4-206ENST00000441089 ZNF324O75467 553 aaPredicted RBP3.39□□□□□ -1.87
PTPN4-206ENST00000441089 MT-ND4LP03901 98 aa3.39□□□□□ -1.87
PTPN4-206ENST00000441089 PRM2P04554 102 aa3.39□□□□□ -1.87
PTPN4-206ENST00000441089 PFN1P07737 140 aaKnown RBP3.39□□□□□ -1.87
PTPN4-206ENST00000441089 GZMBP10144 247 aa3.39□□□□□ -1.87
PTPN4-206ENST00000441089 RNASE4P34096 147 aaKnown RBP3.39□□□□□ -1.87
PTPN4-206ENST00000441089 CDKN1BP46527 198 aa3.39□□□□□ -1.87
PTPN4-206ENST00000441089 NANOS2P60321 138 aaKnown RBP3.39□□□□□ -1.87
PTPN4-206ENST00000441089 ERVFC1-1P60608 527 aa3.39□□□□□ -1.87
PTPN4-206ENST00000441089 ANXA2RQ3ZCQ2 193 aa3.39□□□□□ -1.87
PTPN4-206ENST00000441089 IBA57Q5T440 356 aaKnown RBP3.39□□□□□ -1.87
PTPN4-206ENST00000441089 FAM162BQ5T6X4 162 aa3.39□□□□□ -1.87
PTPN4-206ENST00000441089 TMEM88Q6PEY1 159 aa3.39□□□□□ -1.87
PTPN4-206ENST00000441089 STHQ8IWL8 128 aa3.39□□□□□ -1.87
PTPN4-206ENST00000441089 C1orf158Q8N1D5 194 aa3.39□□□□□ -1.87
PTPN4-206ENST00000441089 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
PTPN4-206ENST00000441089 RPP21Q9H633 154 aaKnown RBP3.39□□□□□ -1.87
PTPN4-206ENST00000441089 TMSB15BA0A087X1C1 80 aa3.38□□□□□ -1.87
PTPN4-206ENST00000441089 TRAV12-3A0A0B4J271 114 aa3.38□□□□□ -1.87
PTPN4-206ENST00000441089 TRAV21A0A0B4J279 112 aa3.38□□□□□ -1.87
PTPN4-206ENST00000441089 GRIFINA4D1Z8 144 aa3.38□□□□□ -1.87
PTPN4-206ENST00000441089 FABP5P3A8MUU1 101 aa3.38□□□□□ -1.87
PTPN4-206ENST00000441089 PPP1R2P9O14990 202 aa3.38□□□□□ -1.87
PTPN4-206ENST00000441089 P01737 135 aa3.38□□□□□ -1.87
PTPN4-206ENST00000441089 GPX1P07203 203 aa3.38□□□□□ -1.87
PTPN4-206ENST00000441089 CXCL1P09341 107 aa3.38□□□□□ -1.87
PTPN4-206ENST00000441089 TSPOP30536 169 aa3.38□□□□□ -1.87
PTPN4-206ENST00000441089 TCL1AP56279 114 aa3.38□□□□□ -1.87
PTPN4-206ENST00000441089 FAM3BP58499 235 aaPredicted RBP3.38□□□□□ -1.87
PTPN4-206ENST00000441089 SUMO2P61956 95 aaKnown RBP3.38□□□□□ -1.87
PTPN4-206ENST00000441089 DEFB135Q30KP9 77 aa3.38□□□□□ -1.87
PTPN4-206ENST00000441089 MUC21Q5SSG8 566 aa3.38□□□□□ -1.87
PTPN4-206ENST00000441089 Q6ZR54 194 aa3.38□□□□□ -1.87
PTPN4-206ENST00000441089 CSNK1G2-AS1Q8NCQ2 148 aa3.38□□□□□ -1.87
PTPN4-206ENST00000441089 OR2D3Q8NGH3 330 aa3.38□□□□□ -1.87
PTPN4-206ENST00000441089 GTSF1Q8WW33 167 aa3.38□□□□□ -1.87
PTPN4-206ENST00000441089 CTDSP1Q9GZU7 261 aa3.38□□□□□ -1.87
PTPN4-206ENST00000441089 BIN3Q9NQY0 253 aa3.38□□□□□ -1.87
PTPN4-206ENST00000441089 IL36BQ9NZH7 164 aa3.38□□□□□ -1.87
PTPN4-206ENST00000441089 XCL2Q9UBD3 114 aa3.38□□□□□ -1.87
PTPN4-206ENST00000441089 TP53TG3Q9ULZ0 132 aa3.38□□□□□ -1.87
PTPN4-206ENST00000441089 IGHV4-4A0A075B6R2 117 aa3.37□□□□□ -1.87
PTPN4-206ENST00000441089 TGIF2-C20orf24A0A0A6YYL0 155 aa3.37□□□□□ -1.87
PTPN4-206ENST00000441089 SMIM27A0A1W2PRY6 76 aa3.37□□□□□ -1.87
PTPN4-206ENST00000441089 TMEM189A5PLL7 270 aa3.37□□□□□ -1.87
PTPN4-206ENST00000441089 COLCA2A8K830 154 aa3.37□□□□□ -1.87
PTPN4-206ENST00000441089 GNRH2O43555 120 aa3.37□□□□□ -1.87
PTPN4-206ENST00000441089 ORM1P02763 201 aa3.37□□□□□ -1.87
PTPN4-206ENST00000441089 TYMSP04818 313 aa3.37□□□□□ -1.87
PTPN4-206ENST00000441089 IGLC6P0CF74 106 aa3.37□□□□□ -1.87
PTPN4-206ENST00000441089 RNASE3P12724 160 aaKnown RBP3.37□□□□□ -1.87
PTPN4-206ENST00000441089 FOXA3P55318 350 aaPredicted RBP3.37□□□□□ -1.87
PTPN4-206ENST00000441089 ELOBQ15370 118 aa3.37□□□□□ -1.87
PTPN4-206ENST00000441089 C15orf54Q8N8G6 183 aa3.37□□□□□ -1.87
PTPN4-206ENST00000441089 TSKUQ8WUA8 353 aa3.37□□□□□ -1.87
PTPN4-206ENST00000441089 PYGO2Q9BRQ0 406 aa3.37□□□□□ -1.87
PTPN4-206ENST00000441089 C11orf68Q9H3H3 251 aaKnown RBP3.37□□□□□ -1.87
PTPN4-206ENST00000441089 SMCO4Q9NRQ5 59 aa3.37□□□□□ -1.87
PTPN4-206ENST00000441089 TMEM242Q9NWH2 141 aa3.37□□□□□ -1.87
PTPN4-206ENST00000441089 NAGKQ9UJ70 344 aa3.37□□□□□ -1.87
PTPN4-206ENST00000441089 URGCP-MRPS24S4R325 110 aa3.37□□□□□ -1.87
PTPN4-206ENST00000441089 IGLV2-18A0A075B6J9 118 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 IGHV1OR15-1A0A075B7D0 117 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 IGHV3-16A0A0C4DH30 117 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 MUC21A0A0G2JKD1 596 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 KIR2DL5BA0A0G2JN68 375 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 KIR2DL5BA0A0G2JPC4 375 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 MUC21A0A140T8X8 626 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 A0A1B0GXF2 115 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 A0A1W2PPQ1 181 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 PLAC8L1A1L4L8 177 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 HIGD1CA8MV81 97 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 SNAI2O43623 268 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 SPINK4O60575 86 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 INSP01308 110 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 AMBPP02760 352 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 ARMS2P0C7Q2 107 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 AZU1P20160 251 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 CTRLP40313 264 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 RPS20P60866 119 aaKnown RBP3.36□□□□□ -1.87
PTPN4-206ENST00000441089 TDRG1Q3Y452 100 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 DNLZQ5SXM8 178 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 MORN3Q6PF18 240 aaPredicted RBP3.36□□□□□ -1.87
PTPN4-206ENST00000441089 LYZL1Q6UWQ5 148 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 ZNF705AQ6ZN79 300 aaPredicted RBP3.36□□□□□ -1.87
PTPN4-206ENST00000441089 KIR2DL5AQ8N109 375 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 C11orf72Q8NBR9 251 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 NUP35Q8NFH5 326 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 KIR2DL5BQ8NHK3 375 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 PRSS3P2Q8NHM4 247 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 PGLYRP4Q96LB8 373 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 C9orf85Q96MD7 179 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 IMMP2LQ96T52 175 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 LINC00467Q9BRT7 94 aa3.36□□□□□ -1.87
PTPN4-206ENST00000441089 GFRA4Q9GZZ7 299 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms