RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 ATOH7Q8N100 152 aa6.8□□□□□ -1.32
HDAC6-209ENST00000440653 KLHL30-AS1Q8NEE0 82 aa6.8□□□□□ -1.32
HDAC6-209ENST00000440653 OR1N2Q8NGR9 330 aa6.8□□□□□ -1.32
HDAC6-209ENST00000440653 DNAH3Q8TD57 4116 aa6.8□□□□□ -1.32
HDAC6-209ENST00000440653 C9orf85Q96MD7 179 aa6.8□□□□□ -1.32
HDAC6-209ENST00000440653 SPAG8Q99932 426 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-209ENST00000440653 SNHG12Q9BXW3 62 aa6.8□□□□□ -1.32
HDAC6-209ENST00000440653 NOTCH3Q9UM47 2321 aa6.8□□□□□ -1.32
HDAC6-209ENST00000440653 GOLT1BQ9Y3E0 138 aa6.8□□□□□ -1.32
HDAC6-209ENST00000440653 HLA-DRB4X5D2U9 266 aa6.8□□□□□ -1.32
HDAC6-209ENST00000440653 IGLV2-18A0A075B6J9 118 aa6.79□□□□□ -1.32
HDAC6-209ENST00000440653 J3KRW8 73 aa6.79□□□□□ -1.32
HDAC6-209ENST00000440653 IGLL1P15814 213 aa6.79□□□□□ -1.32
HDAC6-209ENST00000440653 SLURP1P55000 103 aa6.79□□□□□ -1.32
HDAC6-209ENST00000440653 SSTP61278 116 aa6.79□□□□□ -1.32
HDAC6-209ENST00000440653 SUMO2P61956 95 aaKnown RBP6.79□□□□□ -1.32
HDAC6-209ENST00000440653 FHL3Q13643 280 aa6.79□□□□□ -1.32
HDAC6-209ENST00000440653 LAGE3Q14657 143 aa6.79□□□□□ -1.32
HDAC6-209ENST00000440653 BEAN1Q3B7T3 259 aa6.79□□□□□ -1.32
HDAC6-209ENST00000440653 SLC25A34Q6PIV7 304 aa6.79□□□□□ -1.32
HDAC6-209ENST00000440653 LINC00173Q6ZV60 143 aa6.79□□□□□ -1.32
HDAC6-209ENST00000440653 WFDC3Q8IUB2 231 aa6.79□□□□□ -1.32
HDAC6-209ENST00000440653 OR11H1Q8NG94 326 aa6.79□□□□□ -1.32
HDAC6-209ENST00000440653 CLUHP3Q96NS8 147 aa6.79□□□□□ -1.32
HDAC6-209ENST00000440653 DUX5Q96PT3 197 aa6.79□□□□□ -1.32
HDAC6-209ENST00000440653 JMJD8Q96S16 334 aa6.79□□□□□ -1.32
HDAC6-209ENST00000440653 C16orf95Q9H693 158 aa6.79□□□□□ -1.32
HDAC6-209ENST00000440653 IGHV1OR15-1A0A075B7D0 117 aa6.78□□□□□ -1.32
HDAC6-209ENST00000440653 TCAPO15273 167 aa6.78□□□□□ -1.32
HDAC6-209ENST00000440653 MGPP08493 103 aa6.78□□□□□ -1.32
HDAC6-209ENST00000440653 CD7P09564 240 aa6.78□□□□□ -1.32
HDAC6-209ENST00000440653 EDN2P20800 178 aa6.78□□□□□ -1.32
HDAC6-209ENST00000440653 TFPI2P48307 235 aa6.78□□□□□ -1.32
HDAC6-209ENST00000440653 PIK3CD-AS1Q5SR53 167 aa6.78□□□□□ -1.32
HDAC6-209ENST00000440653 COL5A1-AS1Q5SY13 56 aa6.78□□□□□ -1.32
HDAC6-209ENST00000440653 MRAPQ8TCY5 172 aa6.78□□□□□ -1.32
HDAC6-209ENST00000440653 TIMM8BQ9Y5J9 83 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-209ENST00000440653 IGHV3-16A0A0C4DH30 117 aa6.77□□□□□ -1.33
HDAC6-209ENST00000440653 G3V4G9 280 aa6.77□□□□□ -1.33
HDAC6-209ENST00000440653 H0Y8G0 127 aa6.77□□□□□ -1.33
HDAC6-209ENST00000440653 DEFB1P60022 68 aa6.77□□□□□ -1.33
HDAC6-209ENST00000440653 NUTF2P61970 127 aaKnown RBP6.77□□□□□ -1.33
HDAC6-209ENST00000440653 DEFB136Q30KP8 78 aa6.77□□□□□ -1.33
HDAC6-209ENST00000440653 AMTNQ6UX39 209 aa6.77□□□□□ -1.33
HDAC6-209ENST00000440653 LINC00467Q9BRT7 94 aa6.77□□□□□ -1.33
HDAC6-209ENST00000440653 TSSC4Q9Y5U2 329 aaPredicted RBP6.77□□□□□ -1.33
HDAC6-209ENST00000440653 TRAV12-3A0A0B4J271 114 aa6.76□□□□□ -1.33
HDAC6-209ENST00000440653 NDUFA7O95182 113 aa6.76□□□□□ -1.33
HDAC6-209ENST00000440653 COX8AP10176 69 aa6.76□□□□□ -1.33
HDAC6-209ENST00000440653 CMC4P56277 68 aaPredicted RBP6.76□□□□□ -1.33
HDAC6-209ENST00000440653 SPINK13Q1W4C9 94 aa6.76□□□□□ -1.33
HDAC6-209ENST00000440653 TMEM61Q8N0U2 210 aa6.76□□□□□ -1.33
HDAC6-209ENST00000440653 RAX2Q96IS3 184 aa6.76□□□□□ -1.33
HDAC6-209ENST00000440653 EDA2RQ9HAV5 297 aa6.76□□□□□ -1.33
HDAC6-209ENST00000440653 TRAV12-1A0A0B4J245 112 aa6.75□□□□□ -1.33
HDAC6-209ENST00000440653 TRAV26-2A0A0B4J265 109 aa6.75□□□□□ -1.33
HDAC6-209ENST00000440653 TRBV6-5A0A0K0K1A5 114 aa6.75□□□□□ -1.33
HDAC6-209ENST00000440653 hDV102S1A0JD36 115 aa6.75□□□□□ -1.33
HDAC6-209ENST00000440653 H7C1H1 209 aa6.75□□□□□ -1.33
HDAC6-209ENST00000440653 DLEU1O43261 78 aa6.75□□□□□ -1.33
HDAC6-209ENST00000440653 NUDT3O95989 172 aa6.75□□□□□ -1.33
HDAC6-209ENST00000440653 INSP01308 110 aa6.75□□□□□ -1.33
HDAC6-209ENST00000440653 PLNP26678 52 aa6.75□□□□□ -1.33
HDAC6-209ENST00000440653 DEFB131AP59861 70 aa6.75□□□□□ -1.33
HDAC6-209ENST00000440653 ZNF415Q09FC8 603 aa6.75□□□□□ -1.33
HDAC6-209ENST00000440653 ADAMTSL5Q6ZMM2 481 aa6.75□□□□□ -1.33
HDAC6-209ENST00000440653 Q6ZQT7 251 aa6.75□□□□□ -1.33
HDAC6-209ENST00000440653 C14orf178Q8N769 122 aaPredicted RBP6.75□□□□□ -1.33
HDAC6-209ENST00000440653 RASL10AQ92737 203 aa6.75□□□□□ -1.33
HDAC6-209ENST00000440653 PTH2Q96A98 100 aa6.75□□□□□ -1.33
HDAC6-209ENST00000440653 WWC2-AS2Q96NR7 200 aa6.75□□□□□ -1.33
HDAC6-209ENST00000440653 MAP6D1Q9H9H5 199 aa6.75□□□□□ -1.33
HDAC6-209ENST00000440653 ZNF256Q9Y2P7 627 aaPredicted RBP6.75□□□□□ -1.33
HDAC6-209ENST00000440653 KIF25-AS1Q9Y6Z4 181 aa6.75□□□□□ -1.33
HDAC6-209ENST00000440653 A0A1B0GV90 55 aa6.74□□□□□ -1.33
HDAC6-209ENST00000440653 H3BMM0 161 aa6.74□□□□□ -1.33
HDAC6-209ENST00000440653 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.74□□□□□ -1.33
HDAC6-209ENST00000440653 GNRH2O43555 120 aa6.74□□□□□ -1.33
HDAC6-209ENST00000440653 DPM2O94777 84 aa6.74□□□□□ -1.33
HDAC6-209ENST00000440653 GATA1P15976 413 aaPredicted RBP6.74□□□□□ -1.33
HDAC6-209ENST00000440653 ODF1Q14990 250 aa6.74□□□□□ -1.33
HDAC6-209ENST00000440653 MAJINQ3KP22 176 aa6.74□□□□□ -1.33
HDAC6-209ENST00000440653 DLX4Q92988 240 aaPredicted RBP6.74□□□□□ -1.33
HDAC6-209ENST00000440653 TOMM6Q96B49 74 aa6.74□□□□□ -1.33
HDAC6-209ENST00000440653 LYSTQ99698 3801 aa6.74□□□□□ -1.33
HDAC6-209ENST00000440653 RHODO00212 210 aa6.73□□□□□ -1.33
HDAC6-209ENST00000440653 SIVA1O15304 175 aa6.73□□□□□ -1.33
HDAC6-209ENST00000440653 GAS8-AS1O95177 125 aa6.73□□□□□ -1.33
HDAC6-209ENST00000440653 IGKCP01834 107 aa6.73□□□□□ -1.33
HDAC6-209ENST00000440653 KRTAP10-3P60369 221 aa6.73□□□□□ -1.33
HDAC6-209ENST00000440653 RHOHQ15669 191 aa6.73□□□□□ -1.33
HDAC6-209ENST00000440653 DEFB114Q30KQ6 69 aa6.73□□□□□ -1.33
HDAC6-209ENST00000440653 KPRPQ5T749 579 aaPredicted RBP6.73□□□□□ -1.33
HDAC6-209ENST00000440653 SUMO4Q6EEV6 95 aa6.73□□□□□ -1.33
HDAC6-209ENST00000440653 C18orf65Q6ZTR6 163 aa6.73□□□□□ -1.33
HDAC6-209ENST00000440653 TRPT1Q86TN4 253 aaKnown RBP6.73□□□□□ -1.33
HDAC6-209ENST00000440653 Q8N1Y9 231 aa6.73□□□□□ -1.33
HDAC6-209ENST00000440653 KIR2DL4Q99706 377 aa6.73□□□□□ -1.33
HDAC6-209ENST00000440653 FAM110AQ9BQ89 295 aa6.73□□□□□ -1.33
HDAC6-209ENST00000440653 ZMAT4Q9H898 229 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms