RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 CRIP3Q6Q6R5 217 aa11.35□□□□□ -0.59
PCNX1-202ENST00000439984 TTC28Q96AY4 2481 aa11.35□□□□□ -0.59
PCNX1-202ENST00000439984 SND1-IT1Q9HBX3 110 aa11.35□□□□□ -0.59
PCNX1-202ENST00000439984 K7EIM0 57 aa11.34□□□□□ -0.59
PCNX1-202ENST00000439984 NACAE9PAV3 2078 aa11.34□□□□□ -0.59
PCNX1-202ENST00000439984 LECT2O14960 151 aa11.34□□□□□ -0.59
PCNX1-202ENST00000439984 ATP5G1P05496 136 aa11.34□□□□□ -0.59
PCNX1-202ENST00000439984 SPTAN1Q13813 2472 aaKnown RBP11.34□□□□□ -0.59
PCNX1-202ENST00000439984 CFAP126Q5VTH2 177 aa11.34□□□□□ -0.59
PCNX1-202ENST00000439984 MED13Q9UHV7 2174 aa11.34□□□□□ -0.59
PCNX1-202ENST00000439984 F8WEM9 126 aa11.34□□□□□ -0.59
PCNX1-202ENST00000439984 COL6A6A6NMZ7 2263 aa11.34□□□□□ -0.59
PCNX1-202ENST00000439984 P0C879 139 aa11.33□□□□□ -0.6
PCNX1-202ENST00000439984 BRWD1-AS2P59051 145 aa11.33□□□□□ -0.6
PCNX1-202ENST00000439984 MBD3L4A6NDZ8 208 aaPredicted RBP11.33□□□□□ -0.6
PCNX1-202ENST00000439984 MBD3L3A6NE82 208 aaPredicted RBP11.33□□□□□ -0.6
PCNX1-202ENST00000439984 MBD3L5A6NJ08 208 aaPredicted RBP11.33□□□□□ -0.6
PCNX1-202ENST00000439984 MBD3L2Q8NHZ7 208 aaPredicted RBP11.33□□□□□ -0.6
PCNX1-202ENST00000439984 IGHV4-4A0A075B6R2 117 aa11.33□□□□□ -0.6
PCNX1-202ENST00000439984 PCNX2A6NKB5 2137 aa11.33□□□□□ -0.6
PCNX1-202ENST00000439984 WFDC11Q8NEX6 87 aa11.33□□□□□ -0.6
PCNX1-202ENST00000439984 COX7B2Q8TF08 81 aa11.32□□□□□ -0.6
PCNX1-202ENST00000439984 NCOA6Q14686 2063 aaPredicted RBP11.32□□□□□ -0.6
PCNX1-202ENST00000439984 V9GYY9 64 aa11.32□□□□□ -0.6
PCNX1-202ENST00000439984 ZNF80P51504 273 aaPredicted RBP11.32□□□□□ -0.6
PCNX1-202ENST00000439984 Q71RC1 249 aaPredicted RBP11.32□□□□□ -0.6
PCNX1-202ENST00000439984 CACNA1BQ00975 2339 aa11.32□□□□□ -0.6
PCNX1-202ENST00000439984 SLC25A29Q8N8R3 303 aa11.32□□□□□ -0.6
PCNX1-202ENST00000439984 DEFB1P60022 68 aa11.32□□□□□ -0.6
PCNX1-202ENST00000439984 MRPL53Q96EL3 112 aaKnown RBP11.31□□□□□ -0.6
PCNX1-202ENST00000439984 WFDC9Q8NEX5 89 aa11.31□□□□□ -0.6
PCNX1-202ENST00000439984 NFE4Q86UQ8 179 aa11.31□□□□□ -0.6
PCNX1-202ENST00000439984 DAZ2Q13117 558 aaKnown RBP11.31□□□□□ -0.6
PCNX1-202ENST00000439984 DAZ4Q86SG3 579 aaKnown RBP11.31□□□□□ -0.6
PCNX1-202ENST00000439984 MLST8Q9BVC4 326 aa11.31□□□□□ -0.6
PCNX1-202ENST00000439984 DAZ3Q9NR90 486 aaKnown RBP11.31□□□□□ -0.6
PCNX1-202ENST00000439984 IGKV1D-37A0A075B6S9 117 aa11.3□□□□□ -0.6
PCNX1-202ENST00000439984 FAM236DA0A1B0GTK5 79 aa11.3□□□□□ -0.6
PCNX1-202ENST00000439984 FAM236CP0DP71 79 aa11.3□□□□□ -0.6
PCNX1-202ENST00000439984 FREM1Q5H8C1 2179 aa11.3□□□□□ -0.6
PCNX1-202ENST00000439984 PRSS33Q8NF86 280 aa11.3□□□□□ -0.6
PCNX1-202ENST00000439984 IGHV4-28A0A0C4DH34 117 aa11.3□□□□□ -0.6
PCNX1-202ENST00000439984 NDUFA4O00483 81 aa11.3□□□□□ -0.6
PCNX1-202ENST00000439984 C5orf38Q86SI9 138 aa11.29□□□□□ -0.6
PCNX1-202ENST00000439984 IGHV3-30-3P0DP02 117 aa11.29□□□□□ -0.6
PCNX1-202ENST00000439984 PLXNB1O43157 2135 aa11.29□□□□□ -0.6
PCNX1-202ENST00000439984 TRIAP1O43715 76 aa11.29□□□□□ -0.6
PCNX1-202ENST00000439984 XCL1P47992 114 aa11.29□□□□□ -0.6
PCNX1-202ENST00000439984 H0YGX0 51 aa11.29□□□□□ -0.6
PCNX1-202ENST00000439984 RNF138Q8WVD3 245 aa11.29□□□□□ -0.6
PCNX1-202ENST00000439984 A0A096LPF7 62 aa11.28□□□□□ -0.6
PCNX1-202ENST00000439984 IGLV1-44P01699 117 aa11.28□□□□□ -0.6
PCNX1-202ENST00000439984 DEFB105AQ8NG35 78 aa11.28□□□□□ -0.6
PCNX1-202ENST00000439984 MED12LQ86YW9 2145 aa11.28□□□□□ -0.6
PCNX1-202ENST00000439984 HRCT1Q6UXD1 115 aa11.28□□□□□ -0.6
PCNX1-202ENST00000439984 CTSZQ9UBR2 303 aa11.28□□□□□ -0.6
PCNX1-202ENST00000439984 CREBBPQ92793 2442 aa11.28□□□□□ -0.6
PCNX1-202ENST00000439984 TIMM17AQ99595 171 aa11.28□□□□□ -0.6
PCNX1-202ENST00000439984 A0A0J9YXY3 114 aa11.28□□□□□ -0.6
PCNX1-202ENST00000439984 CEMP1Q6PRD7 247 aaPredicted RBP11.28□□□□□ -0.6
PCNX1-202ENST00000439984 MED13LQ71F56 2210 aa11.28□□□□□ -0.6
PCNX1-202ENST00000439984 PRR30Q53SZ7 412 aaPredicted RBP11.28□□□□□ -0.6
PCNX1-202ENST00000439984 C8orf31Q8N9H6 132 aa11.28□□□□□ -0.6
PCNX1-202ENST00000439984 MALRD1Q5VYJ5 2156 aa11.27□□□□□ -0.6
PCNX1-202ENST00000439984 A0A0J9YY99 117 aa11.27□□□□□ -0.61
PCNX1-202ENST00000439984 F5H768 121 aa11.27□□□□□ -0.61
PCNX1-202ENST00000439984 COX6B1P14854 86 aa11.27□□□□□ -0.61
PCNX1-202ENST00000439984 IGLV2-23P01705 113 aa11.26□□□□□ -0.61
PCNX1-202ENST00000439984 IGHV7-4-1A0A0J9YVY3 117 aa11.26□□□□□ -0.61
PCNX1-202ENST00000439984 CTSGP08311 255 aa11.26□□□□□ -0.61
PCNX1-202ENST00000439984 U3KQE9 123 aa11.26□□□□□ -0.61
PCNX1-202ENST00000439984 MUC22E2RYF6 1773 aaPredicted RBP11.26□□□□□ -0.61
PCNX1-202ENST00000439984 TMEM131Q92545 1883 aa11.26□□□□□ -0.61
PCNX1-202ENST00000439984 SHISA2Q6UWI4 295 aa11.26□□□□□ -0.61
PCNX1-202ENST00000439984 NEXN-AS1Q8NBZ9 246 aa11.26□□□□□ -0.61
PCNX1-202ENST00000439984 WI2-2373I1.2A0A1W2PRP0 233 aa11.26□□□□□ -0.61
PCNX1-202ENST00000439984 NSUN5P1Q3KNT7 163 aa11.26□□□□□ -0.61
PCNX1-202ENST00000439984 UPK3BQ9BT76 320 aa11.26□□□□□ -0.61
PCNX1-202ENST00000439984 BPESC1Q9GZL8 116 aa11.26□□□□□ -0.61
PCNX1-202ENST00000439984 PROP1O75360 226 aa11.25□□□□□ -0.61
PCNX1-202ENST00000439984 CDK2AP2O75956 126 aa11.25□□□□□ -0.61
PCNX1-202ENST00000439984 PTPRSQ13332 1948 aa11.25□□□□□ -0.61
PCNX1-202ENST00000439984 SMIM9A6NGZ8 99 aa11.25□□□□□ -0.61
PCNX1-202ENST00000439984 MIAQ16674 131 aa11.25□□□□□ -0.61
PCNX1-202ENST00000439984 IGHV1-58A0A0C4DH39 117 aa11.25□□□□□ -0.61
PCNX1-202ENST00000439984 SPTSSBQ8NFR3 76 aa11.25□□□□□ -0.61
PCNX1-202ENST00000439984 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.25□□□□□ -0.612e-6■■■■□ 22.5
PCNX1-202ENST00000439984 TRBV6-1A0A0K0K1D8 114 aa11.25□□□□□ -0.61
PCNX1-202ENST00000439984 UCNP55089 124 aa11.25□□□□□ -0.61
PCNX1-202ENST00000439984 LENEPQ9Y5L5 61 aa11.25□□□□□ -0.61
PCNX1-202ENST00000439984 NCKAP5O14513 1909 aa11.24□□□□□ -0.61
PCNX1-202ENST00000439984 BUB3O43684 328 aa11.24□□□□□ -0.61
PCNX1-202ENST00000439984 IGHV3-33P01772 117 aa11.24□□□□□ -0.61
PCNX1-202ENST00000439984 URB1-AS1Q96HZ7 61 aa11.24□□□□□ -0.61
PCNX1-202ENST00000439984 TEX22C9J3V5 150 aa11.24□□□□□ -0.61
PCNX1-202ENST00000439984 TANC2Q9HCD6 1990 aa11.24□□□□□ -0.61
PCNX1-202ENST00000439984 CRIP1P50238 77 aa11.24□□□□□ -0.61
PCNX1-202ENST00000439984 LHBP01229 141 aa11.23□□□□□ -0.61
PCNX1-202ENST00000439984 IGLV11-55A0A075B6I3 123 aa11.23□□□□□ -0.61
PCNX1-202ENST00000439984 TRBV12-3P01733 135 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms