RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 PTH2Q96A98 100 aa11.01□□□□□ -0.65
ITGB1-207ENST00000439974 DAZAP1Q96EP5 407 aaKnown RBP11.01□□□□□ -0.65
ITGB1-207ENST00000439974 SCRT2Q9NQ03 307 aa11.01□□□□□ -0.65
ITGB1-207ENST00000439974 SRSF3P84103 164 aaKnown RBP11□□□□□ -0.65
ITGB1-207ENST00000439974 FAM74A4Q5TZK3 123 aa11□□□□□ -0.65
ITGB1-207ENST00000439974 SLC25A29Q8N8R3 303 aa11□□□□□ -0.65
ITGB1-207ENST00000439974 SYT8Q8NBV8 401 aa11□□□□□ -0.65
ITGB1-207ENST00000439974 TPPP3Q9BW30 176 aa11□□□□□ -0.65
ITGB1-207ENST00000439974 RNASE7Q9H1E1 156 aaKnown RBP11□□□□□ -0.65
ITGB1-207ENST00000439974 C9JQL5 133 aa10.99□□□□□ -0.65
ITGB1-207ENST00000439974 TMEM250H0YL14 139 aa10.99□□□□□ -0.65
ITGB1-207ENST00000439974 SRP19P09132 144 aaKnown RBP10.99□□□□□ -0.65
ITGB1-207ENST00000439974 Q9UF83 564 aa10.99□□□□□ -0.65
ITGB1-207ENST00000439974 A8MWV9 139 aa10.98□□□□□ -0.65
ITGB1-207ENST00000439974 SIVA1O15304 175 aa10.98□□□□□ -0.65
ITGB1-207ENST00000439974 P01737 135 aa10.98□□□□□ -0.65
ITGB1-207ENST00000439974 SRIP30626 198 aa10.98□□□□□ -0.65
ITGB1-207ENST00000439974 MRPL23Q16540 153 aaKnown RBP10.98□□□□□ -0.65
ITGB1-207ENST00000439974 UFSP1Q6NVU6 142 aa10.98□□□□□ -0.65
ITGB1-207ENST00000439974 ZFP82Q8N141 532 aa10.98□□□□□ -0.65
ITGB1-207ENST00000439974 MAPKAPK5-AS1Q8N8E1 139 aa10.98□□□□□ -0.65
ITGB1-207ENST00000439974 NUDT10Q8NFP7 164 aa10.98□□□□□ -0.65
ITGB1-207ENST00000439974 NUDT11Q96G61 164 aa10.98□□□□□ -0.65
ITGB1-207ENST00000439974 LINC00315P59091 139 aa10.97□□□□□ -0.65
ITGB1-207ENST00000439974 C14orf178Q8N769 122 aaPredicted RBP10.97□□□□□ -0.65
ITGB1-207ENST00000439974 SMIM12Q96EX1 92 aa10.97□□□□□ -0.65
ITGB1-207ENST00000439974 SFRP2Q96HF1 295 aa10.97□□□□□ -0.65
ITGB1-207ENST00000439974 SNAI2O43623 268 aa10.96□□□□□ -0.65
ITGB1-207ENST00000439974 CRYGDP07320 174 aa10.96□□□□□ -0.65
ITGB1-207ENST00000439974 CXCL1P09341 107 aa10.96□□□□□ -0.65
ITGB1-207ENST00000439974 KRTAP10-2P60368 255 aa10.96□□□□□ -0.65
ITGB1-207ENST00000439974 LYPD5Q6UWN5 251 aa10.96□□□□□ -0.65
ITGB1-207ENST00000439974 NEGR1Q7Z3B1 354 aa10.96□□□□□ -0.65
ITGB1-207ENST00000439974 SMIM7Q9BQ49 75 aa10.96□□□□□ -0.65
ITGB1-207ENST00000439974 GAGE12JA6NER3 117 aa10.95□□□□□ -0.66
ITGB1-207ENST00000439974 NXPH4O95158 308 aa10.95□□□□□ -0.66
ITGB1-207ENST00000439974 GAGE1Q13065 139 aa10.95□□□□□ -0.66
ITGB1-207ENST00000439974 GAGE4Q13068 117 aa10.95□□□□□ -0.66
ITGB1-207ENST00000439974 GAGE5Q13069 117 aa10.95□□□□□ -0.66
ITGB1-207ENST00000439974 GAGE13Q4V321 117 aa10.95□□□□□ -0.66
ITGB1-207ENST00000439974 SPANXN1Q5VSR9 72 aa10.95□□□□□ -0.66
ITGB1-207ENST00000439974 FER1L6-AS1Q8NA97 138 aa10.95□□□□□ -0.66
ITGB1-207ENST00000439974 PRADC1Q9BSG0 188 aa10.95□□□□□ -0.66
ITGB1-207ENST00000439974 SSBP4Q9BWG4 385 aaPredicted RBP10.95□□□□□ -0.66
ITGB1-207ENST00000439974 MSRB1Q9NZV6 116 aa10.95□□□□□ -0.66
ITGB1-207ENST00000439974 ZNF727A8MUV8 499 aa10.94□□□□□ -0.66
ITGB1-207ENST00000439974 OR5AL1P0C617 328 aa10.94□□□□□ -0.66
ITGB1-207ENST00000439974 IGLC6P0CF74 106 aa10.94□□□□□ -0.66
ITGB1-207ENST00000439974 RHOHQ15669 191 aa10.94□□□□□ -0.66
ITGB1-207ENST00000439974 PIK3CD-AS1Q5SR53 167 aa10.94□□□□□ -0.66
ITGB1-207ENST00000439974 ZFP2Q6ZN57 461 aa10.94□□□□□ -0.66
ITGB1-207ENST00000439974 Q6ZRN7 208 aaPredicted RBP10.94□□□□□ -0.66
ITGB1-207ENST00000439974 RPP21Q9H633 154 aaKnown RBP10.94□□□□□ -0.66
ITGB1-207ENST00000439974 BIN3Q9NQY0 253 aa10.94□□□□□ -0.66
ITGB1-207ENST00000439974 TRBV6-4A0A1B0GX49 114 aa10.93□□□□□ -0.66
ITGB1-207ENST00000439974 RPS20P60866 119 aaKnown RBP10.93□□□□□ -0.66
ITGB1-207ENST00000439974 LYZL1Q6UWQ5 148 aa10.93□□□□□ -0.66
ITGB1-207ENST00000439974 Q8N1X5 172 aa10.93□□□□□ -0.66
ITGB1-207ENST00000439974 CIDEAO60543 219 aa10.92□□□□□ -0.66
ITGB1-207ENST00000439974 RHODO00212 210 aa10.91□□□□□ -0.66
ITGB1-207ENST00000439974 GATCO43716 136 aaKnown RBP10.91□□□□□ -0.66
ITGB1-207ENST00000439974 ZNF56Q15929 161 aa10.91□□□□□ -0.66
ITGB1-207ENST00000439974 LINC01551Q86U37 167 aa10.91□□□□□ -0.66
ITGB1-207ENST00000439974 WFDC10BQ8IUB3 73 aa10.91□□□□□ -0.66
ITGB1-207ENST00000439974 XKRY2A2RUG3 117 aa10.9□□□□□ -0.66
ITGB1-207ENST00000439974 ERVFC1-1P60608 527 aa10.9□□□□□ -0.66
ITGB1-207ENST00000439974 IFITM2Q01629 132 aa10.9□□□□□ -0.66
ITGB1-207ENST00000439974 PEA15Q15121 130 aa10.9□□□□□ -0.66
ITGB1-207ENST00000439974 NFE4Q86UQ8 179 aa10.9□□□□□ -0.66
ITGB1-207ENST00000439974 GTSF1Q8WW33 167 aa10.9□□□□□ -0.66
ITGB1-207ENST00000439974 TRAV9-2A0A087WT02 112 aa10.89□□□□□ -0.67
ITGB1-207ENST00000439974 EREGO14944 169 aa10.89□□□□□ -0.67
ITGB1-207ENST00000439974 MGPP08493 103 aa10.89□□□□□ -0.67
ITGB1-207ENST00000439974 ATP6V0E2Q8NHE4 81 aa10.89□□□□□ -0.67
ITGB1-207ENST00000439974 PGPEP1Q9NXJ5 209 aa10.89□□□□□ -0.67
ITGB1-207ENST00000439974 LY96Q9Y6Y9 160 aa10.89□□□□□ -0.67
ITGB1-207ENST00000439974 F5H697 171 aa10.88□□□□□ -0.67
ITGB1-207ENST00000439974 RAB14P61106 215 aa10.88□□□□□ -0.67
ITGB1-207ENST00000439974 TNFRSF18Q9Y5U5 241 aa10.88□□□□□ -0.67
ITGB1-207ENST00000439974 KIF25-AS1Q9Y6Z4 181 aa10.88□□□□□ -0.67
ITGB1-207ENST00000439974 FAT1Q14517 4588 aa10.87□□□□□ -0.67
ITGB1-207ENST00000439974 NDUFS6O75380 124 aaKnown RBP10.87□□□□□ -0.67
ITGB1-207ENST00000439974 LINC00694P0DN24 101 aa10.87□□□□□ -0.67
ITGB1-207ENST00000439974 NTF3P20783 257 aa10.87□□□□□ -0.67
ITGB1-207ENST00000439974 RPL23P62829 140 aaKnown RBP10.87□□□□□ -0.67
ITGB1-207ENST00000439974 CACNG7P62955 275 aa10.87□□□□□ -0.67
ITGB1-207ENST00000439974 ADIRFQ15847 76 aa10.87□□□□□ -0.67
ITGB1-207ENST00000439974 TMEM241Q24JQ0 296 aa10.87□□□□□ -0.67
ITGB1-207ENST00000439974 FAM231DQ6ZW35 169 aa10.87□□□□□ -0.67
ITGB1-207ENST00000439974 PGLYRP4Q96LB8 373 aa10.87□□□□□ -0.67
ITGB1-207ENST00000439974 AP1S3Q96PC3 154 aa10.87□□□□□ -0.67
ITGB1-207ENST00000439974 K7EP13 123 aa10.86□□□□□ -0.67
ITGB1-207ENST00000439974 SMIM17P0DL12 118 aa10.86□□□□□ -0.67
ITGB1-207ENST00000439974 EVI2AP22794 236 aa10.86□□□□□ -0.67
ITGB1-207ENST00000439974 CTRLP40313 264 aa10.86□□□□□ -0.67
ITGB1-207ENST00000439974 CDPF1Q6NVV7 123 aa10.86□□□□□ -0.67
ITGB1-207ENST00000439974 SH2D6Q7Z4S9 175 aa10.86□□□□□ -0.67
ITGB1-207ENST00000439974 F2Z2F3 143 aa10.85□□□□□ -0.67
ITGB1-207ENST00000439974 FOXA3P55318 350 aaPredicted RBP10.85□□□□□ -0.67
ITGB1-207ENST00000439974 RAB4BP61018 213 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms