RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 LRBAP50851 2863 aa6.87□□□□□ -1.31
COPB1-202ENST00000439561 CFC1BP0CG36 223 aa6.87□□□□□ -1.31
COPB1-202ENST00000439561 CFC1P0CG37 223 aa6.87□□□□□ -1.31
COPB1-202ENST00000439561 COX8CQ7Z4L0 72 aa6.87□□□□□ -1.31
COPB1-202ENST00000439561 RHPN1-AS1Q9BWJ2 59 aa6.87□□□□□ -1.31
COPB1-202ENST00000439561 COX6CP09669 75 aa6.87□□□□□ -1.31
COPB1-202ENST00000439561 ZNF876PQ49A33 203 aa6.87□□□□□ -1.31
COPB1-202ENST00000439561 SUMO4Q6EEV6 95 aa6.87□□□□□ -1.31
COPB1-202ENST00000439561 Q8NA96 180 aa6.87□□□□□ -1.31
COPB1-202ENST00000439561 LY6G5BQ8NDX9 201 aa6.87□□□□□ -1.31
COPB1-202ENST00000439561 MUC6Q6W4X9 2439 aa6.87□□□□□ -1.31
COPB1-202ENST00000439561 CLPSL1A2RUU4 121 aa6.86□□□□□ -1.31
COPB1-202ENST00000439561 OOSP1A8MZH6 123 aa6.86□□□□□ -1.31
COPB1-202ENST00000439561 C2orf82Q6UX34 121 aa6.86□□□□□ -1.31
COPB1-202ENST00000439561 MUSTN1Q8IVN3 82 aa6.86□□□□□ -1.31
COPB1-202ENST00000439561 C3orf56Q8N813 242 aa6.86□□□□□ -1.31
COPB1-202ENST00000439561 KLK9Q9UKQ9 250 aa6.86□□□□□ -1.31
COPB1-202ENST00000439561 MAP1AP78559 2803 aaPredicted RBP6.86□□□□□ -1.31
COPB1-202ENST00000439561 A0A0J9YXV3 536 aa6.86□□□□□ -1.31
COPB1-202ENST00000439561 ODF3BA8MYP8 253 aa6.86□□□□□ -1.31
COPB1-202ENST00000439561 CD28P10747 220 aa6.86□□□□□ -1.31
COPB1-202ENST00000439561 RPL13AP40429 203 aaKnown RBP6.86□□□□□ -1.31
COPB1-202ENST00000439561 CRIP2P52943 208 aaPredicted RBP6.86□□□□□ -1.31
COPB1-202ENST00000439561 ATP6V0E2Q8NHE4 81 aa6.86□□□□□ -1.31
COPB1-202ENST00000439561 CARD19Q96LW7 228 aa6.86□□□□□ -1.31
COPB1-202ENST00000439561 ID1P41134 155 aa6.85□□□□□ -1.31
COPB1-202ENST00000439561 GAGE5Q13069 117 aa6.85□□□□□ -1.31
COPB1-202ENST00000439561 GAGE6Q13070 117 aa6.85□□□□□ -1.31
COPB1-202ENST00000439561 ATXN8Q156A1 80 aa6.85□□□□□ -1.31
COPB1-202ENST00000439561 ZFAND2AQ8N6M9 145 aa6.85□□□□□ -1.31
COPB1-202ENST00000439561 BPESC1Q9GZL8 116 aa6.85□□□□□ -1.31
COPB1-202ENST00000439561 NPFFO15130 113 aa6.85□□□□□ -1.31
COPB1-202ENST00000439561 UBE2D1P51668 147 aa6.85□□□□□ -1.31
COPB1-202ENST00000439561 TSPEAR-AS2P59090 65 aa6.85□□□□□ -1.31
COPB1-202ENST00000439561 FHL3Q13643 280 aa6.85□□□□□ -1.31
COPB1-202ENST00000439561 ZNF575Q86XF7 245 aa6.85□□□□□ -1.31
COPB1-202ENST00000439561 TNRC18O15417 2968 aaPredicted RBP6.85□□□□□ -1.31
COPB1-202ENST00000439561 DGAT2L7PQ6IED9 249 aa6.85□□□□□ -1.31
COPB1-202ENST00000439561 TEX49A0A1B0GTD5 131 aa6.84□□□□□ -1.31
COPB1-202ENST00000439561 KNCNA6PVL3 124 aa6.84□□□□□ -1.31
COPB1-202ENST00000439561 C15orf53Q8NAA6 179 aa6.84□□□□□ -1.31
COPB1-202ENST00000439561 TRAV8-3A0A0A6YYJ7 113 aa6.84□□□□□ -1.31
COPB1-202ENST00000439561 SPINK13Q1W4C9 94 aa6.84□□□□□ -1.31
COPB1-202ENST00000439561 MRPL53Q96EL3 112 aaKnown RBP6.84□□□□□ -1.31
COPB1-202ENST00000439561 ZNF625Q96I27 306 aaPredicted RBP6.84□□□□□ -1.31
COPB1-202ENST00000439561 CENPVL3A0A0U1RRI6 287 aa6.83□□□□□ -1.32
COPB1-202ENST00000439561 LINC01546A6NGU7 62 aa6.83□□□□□ -1.32
COPB1-202ENST00000439561 UBE2E1P51965 193 aa6.83□□□□□ -1.32
COPB1-202ENST00000439561 TMEM141Q96I45 108 aa6.83□□□□□ -1.32
COPB1-202ENST00000439561 MOB4Q9Y3A3 225 aa6.83□□□□□ -1.32
COPB1-202ENST00000439561 AKAP13Q12802 2813 aa6.83□□□□□ -1.32
COPB1-202ENST00000439561 H3BMM0 161 aa6.83□□□□□ -1.32
COPB1-202ENST00000439561 IGHV3-30P01768 117 aa6.83□□□□□ -1.32
COPB1-202ENST00000439561 IGHV3-30-5P0DP03 117 aa6.83□□□□□ -1.32
COPB1-202ENST00000439561 SLC25A29Q8N8R3 303 aa6.83□□□□□ -1.32
COPB1-202ENST00000439561 ZNRF2Q8NHG8 242 aa6.83□□□□□ -1.32
COPB1-202ENST00000439561 UBE2WQ96B02 151 aa6.83□□□□□ -1.32
COPB1-202ENST00000439561 DUX5Q96PT3 197 aa6.83□□□□□ -1.32
COPB1-202ENST00000439561 PSMG3-AS1Q96PY0 264 aa6.83□□□□□ -1.32
COPB1-202ENST00000439561 TIMM21Q9BVV7 248 aa6.83□□□□□ -1.32
COPB1-202ENST00000439561 COL27A1Q8IZC6 1860 aaPredicted RBP6.83□□□□□ -1.32
COPB1-202ENST00000439561 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.83□□□□□ -1.32
COPB1-202ENST00000439561 TRAV4A0A0B4J268 109 aa6.83□□□□□ -1.32
COPB1-202ENST00000439561 M0R2P5 195 aa6.83□□□□□ -1.32
COPB1-202ENST00000439561 RNASE3P12724 160 aaKnown RBP6.83□□□□□ -1.32
COPB1-202ENST00000439561 IFITM1P13164 125 aa6.83□□□□□ -1.32
COPB1-202ENST00000439561 TMEM95Q3KNT9 176 aa6.83□□□□□ -1.32
COPB1-202ENST00000439561 SMIM20Q8N5G0 67 aa6.83□□□□□ -1.32
COPB1-202ENST00000439561 GAGE12JA6NER3 117 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 GAGE7O76087 117 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 GAGE12FP0CL80 117 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 GAGE12GP0CL81 117 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 GAGE12IP0CL82 117 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 UBE2D3P61077 147 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 UBE2D2P62837 147 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 GAGE4Q13068 117 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 LINC01620Q4KN68 170 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 CEMP1Q6PRD7 247 aaPredicted RBP6.82□□□□□ -1.32
COPB1-202ENST00000439561 Q8N1Y9 231 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 DAND5Q8N907 189 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 NCOR2Q9Y618 2525 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 IGHV1-69DA0A0B4J2H0 117 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 H3BUX3 64 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 CRYGDP07320 174 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 Q8N6K4 173 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 MDFICQ9P1T7 246 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 ZNF580Q9UK33 172 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 IGLV4-69A0A075B6H9 119 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 CDSNQ15517 529 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 KHDC1LQ5JSQ8 128 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 LENEPQ9Y5L5 61 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 TNFRSF18Q9Y5U5 241 aa6.82□□□□□ -1.32
COPB1-202ENST00000439561 IGHV4-4A0A075B6R2 117 aa6.81□□□□□ -1.32
COPB1-202ENST00000439561 WNK1Q9H4A3 2382 aa6.81□□□□□ -1.32
COPB1-202ENST00000439561 SPENQ96T58 3664 aaKnown RBP6.81□□□□□ -1.32
COPB1-202ENST00000439561 CLEC2BQ92478 149 aa6.81□□□□□ -1.32
COPB1-202ENST00000439561 DUX3Q96PT4 197 aa6.81□□□□□ -1.32
COPB1-202ENST00000439561 FAM223BA6NKX1 122 aa6.8□□□□□ -1.32
COPB1-202ENST00000439561 LINC01619G3V211 115 aa6.8□□□□□ -1.32
COPB1-202ENST00000439561 TSHBP01222 138 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms