RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 SMIM17P0DL12 118 aa9□□□□□ -0.97
SCLT1-202ENST00000439369 ELOBQ15370 118 aa9□□□□□ -0.97
SCLT1-202ENST00000439369 C12orf74Q32Q52 190 aa9□□□□□ -0.97
SCLT1-202ENST00000439369 MRPL54Q6P161 138 aaKnown RBP9□□□□□ -0.97
SCLT1-202ENST00000439369 YPEL4Q96NS1 127 aa9□□□□□ -0.97
SCLT1-202ENST00000439369 DPH3P1Q9H4G8 78 aa9□□□□□ -0.97
SCLT1-202ENST00000439369 MSRB1Q9NZV6 116 aa9□□□□□ -0.97
SCLT1-202ENST00000439369 KIF25-AS1Q9Y6Z4 181 aa9□□□□□ -0.97
SCLT1-202ENST00000439369 CRYGDP07320 174 aa8.99□□□□□ -0.97
SCLT1-202ENST00000439369 SLAQ13239 276 aa8.99□□□□□ -0.97
SCLT1-202ENST00000439369 UFSP1Q6NVU6 142 aa8.99□□□□□ -0.97
SCLT1-202ENST00000439369 TMEM88Q6PEY1 159 aa8.99□□□□□ -0.97
SCLT1-202ENST00000439369 CBLN2Q8IUK8 224 aa8.99□□□□□ -0.97
SCLT1-202ENST00000439369 POM121L12Q8N7R1 296 aa8.99□□□□□ -0.97
SCLT1-202ENST00000439369 MT-ND6P03923 174 aa8.98□□□□□ -0.97
SCLT1-202ENST00000439369 EVI2AP22794 236 aa8.98□□□□□ -0.97
SCLT1-202ENST00000439369 C14orf178Q8N769 122 aaPredicted RBP8.98□□□□□ -0.97
SCLT1-202ENST00000439369 GNB1LQ9BYB4 327 aa8.98□□□□□ -0.97
SCLT1-202ENST00000439369 CAMPP49913 170 aa8.97□□□□□ -0.97
SCLT1-202ENST00000439369 LINC00315P59091 139 aa8.97□□□□□ -0.97
SCLT1-202ENST00000439369 RAB4BP61018 213 aa8.97□□□□□ -0.97
SCLT1-202ENST00000439369 SSTP61278 116 aa8.97□□□□□ -0.97
SCLT1-202ENST00000439369 ZNF479Q96JC4 524 aa8.97□□□□□ -0.97
SCLT1-202ENST00000439369 FAM210BQ96KR6 192 aa8.97□□□□□ -0.97
SCLT1-202ENST00000439369 JPT2Q9H910 190 aa8.97□□□□□ -0.97
SCLT1-202ENST00000439369 TENM3Q9P273 2699 aa8.96□□□□□ -0.97
SCLT1-202ENST00000439369 A0A087WWL8 130 aa8.96□□□□□ -0.98
SCLT1-202ENST00000439369 TGIF2-C20orf24A0A0A6YYL0 155 aa8.96□□□□□ -0.98
SCLT1-202ENST00000439369 TRAV10A0A0B4J240 114 aa8.96□□□□□ -0.98
SCLT1-202ENST00000439369 HLA-DQA1P01909 254 aa8.96□□□□□ -0.98
SCLT1-202ENST00000439369 GATA1P15976 413 aaPredicted RBP8.96□□□□□ -0.98
SCLT1-202ENST00000439369 NANOS2P60321 138 aaKnown RBP8.96□□□□□ -0.98
SCLT1-202ENST00000439369 FHL2Q14192 279 aa8.96□□□□□ -0.98
SCLT1-202ENST00000439369 FAM74A4Q5TZK3 123 aa8.96□□□□□ -0.98
SCLT1-202ENST00000439369 FAM104BQ5XKR9 115 aa8.96□□□□□ -0.98
SCLT1-202ENST00000439369 Q6ZTC4 211 aa8.96□□□□□ -0.98
SCLT1-202ENST00000439369 SAMD10Q9BYL1 202 aa8.96□□□□□ -0.98
SCLT1-202ENST00000439369 TRGV4A0A0C4DH28 118 aa8.95□□□□□ -0.98
SCLT1-202ENST00000439369 TRBV6-4A0A1B0GX49 114 aa8.95□□□□□ -0.98
SCLT1-202ENST00000439369 H3BNG1 76 aa8.95□□□□□ -0.98
SCLT1-202ENST00000439369 H7C1H1 209 aa8.95□□□□□ -0.98
SCLT1-202ENST00000439369 IGHV3-53P01767 116 aa8.95□□□□□ -0.98
SCLT1-202ENST00000439369 TMEM136Q6ZRR5 245 aa8.95□□□□□ -0.98
SCLT1-202ENST00000439369 MRAP2Q96G30 205 aa8.95□□□□□ -0.98
SCLT1-202ENST00000439369 PRO0255Q9UI72 69 aa8.95□□□□□ -0.98
SCLT1-202ENST00000439369 TRBV10-1A0A0K0K1A3 114 aa8.94□□□□□ -0.98
SCLT1-202ENST00000439369 SCO1O75880 301 aa8.94□□□□□ -0.98
SCLT1-202ENST00000439369 PPBPP02775 128 aa8.94□□□□□ -0.98
SCLT1-202ENST00000439369 RAB4AP20338 218 aa8.94□□□□□ -0.98
SCLT1-202ENST00000439369 ZNF56Q15929 161 aa8.94□□□□□ -0.98
SCLT1-202ENST00000439369 DEFB131BA0A096LNP1 70 aa8.93□□□□□ -0.98
SCLT1-202ENST00000439369 COLCA2A8K830 154 aa8.93□□□□□ -0.98
SCLT1-202ENST00000439369 F5H697 171 aa8.93□□□□□ -0.98
SCLT1-202ENST00000439369 F5H768 121 aa8.93□□□□□ -0.98
SCLT1-202ENST00000439369 PPP1R17O96001 155 aa8.93□□□□□ -0.98
SCLT1-202ENST00000439369 MGPP08493 103 aa8.93□□□□□ -0.98
SCLT1-202ENST00000439369 HOXA5P20719 270 aa8.93□□□□□ -0.98
SCLT1-202ENST00000439369 RHOHQ15669 191 aa8.93□□□□□ -0.98
SCLT1-202ENST00000439369 AMN1Q8IY45 258 aa8.93□□□□□ -0.98
SCLT1-202ENST00000439369 RNF185Q96GF1 192 aa8.93□□□□□ -0.98
SCLT1-202ENST00000439369 HHLA3Q9XRX5 114 aa8.93□□□□□ -0.98
SCLT1-202ENST00000439369 CRYBA4P53673 196 aa8.92□□□□□ -0.98
SCLT1-202ENST00000439369 SUMO4Q6EEV6 95 aa8.92□□□□□ -0.98
SCLT1-202ENST00000439369 PRADC1Q9BSG0 188 aa8.92□□□□□ -0.98
SCLT1-202ENST00000439369 IGHV3-73A0A0B4J1V6 119 aa8.91□□□□□ -0.98
SCLT1-202ENST00000439369 K7EQD1 137 aa8.91□□□□□ -0.98
SCLT1-202ENST00000439369 M0QY20 66 aa8.91□□□□□ -0.98
SCLT1-202ENST00000439369 APCSP02743 223 aa8.91□□□□□ -0.98
SCLT1-202ENST00000439369 HTN3P15516 51 aa8.91□□□□□ -0.98
SCLT1-202ENST00000439369 RAB5AP20339 215 aa8.91□□□□□ -0.98
SCLT1-202ENST00000439369 MRPL51Q4U2R6 128 aaKnown RBP8.91□□□□□ -0.98
SCLT1-202ENST00000439369 SLC25A29Q8N8R3 303 aa8.91□□□□□ -0.98
SCLT1-202ENST00000439369 PHLDA1Q8WV24 401 aaPredicted RBP8.91□□□□□ -0.98
SCLT1-202ENST00000439369 DNAJC30Q96LL9 226 aa8.91□□□□□ -0.98
SCLT1-202ENST00000439369 WWC2-AS2Q96NR7 200 aa8.91□□□□□ -0.98
SCLT1-202ENST00000439369 LAMTOR2Q9Y2Q5 125 aa8.91□□□□□ -0.98
SCLT1-202ENST00000439369 NACAE9PAV3 2078 aa8.9□□□□□ -0.98
SCLT1-202ENST00000439369 NUPR2A6NF83 97 aa8.9□□□□□ -0.98
SCLT1-202ENST00000439369 PHOX2AO14813 284 aa8.9□□□□□ -0.98
SCLT1-202ENST00000439369 PAX4O43316 350 aa8.9□□□□□ -0.98
SCLT1-202ENST00000439369 Q6ZSN1 163 aa8.9□□□□□ -0.98
SCLT1-202ENST00000439369 SH2D6Q7Z4S9 175 aa8.9□□□□□ -0.98
SCLT1-202ENST00000439369 MRPL18Q9H0U6 180 aaKnown RBP8.9□□□□□ -0.98
SCLT1-202ENST00000439369 NIT2Q9NQR4 276 aa8.9□□□□□ -0.98
SCLT1-202ENST00000439369 COL7A1Q02388 2944 aa8.9□□□□□ -0.99
SCLT1-202ENST00000439369 PRKDCP78527 4128 aaKnown RBP8.89□□□□□ -0.99
SCLT1-202ENST00000439369 TRBV6-5A0A0K0K1A5 114 aa8.89□□□□□ -0.99
SCLT1-202ENST00000439369 CKS2P33552 79 aa8.89□□□□□ -0.99
SCLT1-202ENST00000439369 CEMP1Q6PRD7 247 aaPredicted RBP8.89□□□□□ -0.99
SCLT1-202ENST00000439369 ORMDL3Q8N138 153 aa8.89□□□□□ -0.99
SCLT1-202ENST00000439369 C15orf53Q8NAA6 179 aa8.89□□□□□ -0.99
SCLT1-202ENST00000439369 TRAPPC1Q9Y5R8 145 aa8.89□□□□□ -0.99
SCLT1-202ENST00000439369 STAB2Q8WWQ8 2551 aa8.89□□□□□ -0.99
SCLT1-202ENST00000439369 TRAV26-1A0A087WT03 109 aa8.88□□□□□ -0.99
SCLT1-202ENST00000439369 TCTAP57738 103 aa8.88□□□□□ -0.99
SCLT1-202ENST00000439369 RPL36AP83881 106 aaKnown RBP8.88□□□□□ -0.99
SCLT1-202ENST00000439369 RPL36ALQ969Q0 106 aaKnown RBP8.88□□□□□ -0.99
SCLT1-202ENST00000439369 VSIG2Q96IQ7 327 aa8.88□□□□□ -0.99
SCLT1-202ENST00000439369 KLK5Q9Y337 293 aaPredicted RBP8.88□□□□□ -0.99
SCLT1-202ENST00000439369 DNAH9Q9NYC9 4486 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms