RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 LGALSLQ3ZCW2 172 aaPredicted RBP9.5□□□□□ -0.89
TNFRSF1A-203ENST00000437813 ZFP30Q9Y2G7 519 aa9.5□□□□□ -0.89
TNFRSF1A-203ENST00000437813 A0A087WWC5 75 aa9.49□□□□□ -0.89
TNFRSF1A-203ENST00000437813 TRAV8-3A0A0A6YYJ7 113 aa9.49□□□□□ -0.89
TNFRSF1A-203ENST00000437813 LTAP01374 205 aa9.49□□□□□ -0.89
TNFRSF1A-203ENST00000437813 S100A4P26447 101 aaKnown RBP9.49□□□□□ -0.89
TNFRSF1A-203ENST00000437813 FHITP49789 147 aa9.49□□□□□ -0.89
TNFRSF1A-203ENST00000437813 NIT1Q86X76 327 aa9.49□□□□□ -0.89
TNFRSF1A-203ENST00000437813 SFRP2Q96HF1 295 aa9.49□□□□□ -0.89
TNFRSF1A-203ENST00000437813 DNAJC30Q96LL9 226 aa9.49□□□□□ -0.89
TNFRSF1A-203ENST00000437813 TM2D2Q9BX73 214 aa9.49□□□□□ -0.89
TNFRSF1A-203ENST00000437813 MAP1LC3B2A6NCE7 125 aa9.48□□□□□ -0.89
TNFRSF1A-203ENST00000437813 M0R036 132 aa9.48□□□□□ -0.89
TNFRSF1A-203ENST00000437813 RHODO00212 210 aa9.48□□□□□ -0.89
TNFRSF1A-203ENST00000437813 FMC1Q96HJ9 113 aa9.48□□□□□ -0.89
TNFRSF1A-203ENST00000437813 MAP1LC3BQ9GZQ8 125 aa9.48□□□□□ -0.89
TNFRSF1A-203ENST00000437813 GRIFINA4D1Z8 144 aa9.47□□□□□ -0.89
TNFRSF1A-203ENST00000437813 FAM229AH3BQW9 127 aa9.47□□□□□ -0.89
TNFRSF1A-203ENST00000437813 AKR1C8PQ5T2L2 129 aa9.47□□□□□ -0.89
TNFRSF1A-203ENST00000437813 FAM162BQ5T6X4 162 aa9.47□□□□□ -0.89
TNFRSF1A-203ENST00000437813 ATRAIDQ6UW56 229 aa9.47□□□□□ -0.89
TNFRSF1A-203ENST00000437813 TCEAL7Q9BRU2 100 aa9.47□□□□□ -0.89
TNFRSF1A-203ENST00000437813 A0A087WWL8 130 aa9.46□□□□□ -0.9
TNFRSF1A-203ENST00000437813 LECT2O14960 151 aa9.46□□□□□ -0.9
TNFRSF1A-203ENST00000437813 OR11H4Q8NGC9 324 aa9.46□□□□□ -0.9
TNFRSF1A-203ENST00000437813 KRTAP10-4P60372 401 aaPredicted RBP9.45□□□□□ -0.9
TNFRSF1A-203ENST00000437813 UBE2D3P61077 147 aa9.45□□□□□ -0.9
TNFRSF1A-203ENST00000437813 UBE2D2P62837 147 aa9.45□□□□□ -0.9
TNFRSF1A-203ENST00000437813 SYT8Q8NBV8 401 aa9.45□□□□□ -0.9
TNFRSF1A-203ENST00000437813 MLST8Q9BVC4 326 aa9.45□□□□□ -0.9
TNFRSF1A-203ENST00000437813 TRBV10-1A0A0K0K1A3 114 aa9.44□□□□□ -0.9
TNFRSF1A-203ENST00000437813 ARPC5O15511 151 aa9.44□□□□□ -0.9
TNFRSF1A-203ENST00000437813 TOR2AQ5JU69 321 aa9.44□□□□□ -0.9
TNFRSF1A-203ENST00000437813 FAM74A4Q5TZK3 123 aa9.44□□□□□ -0.9
TNFRSF1A-203ENST00000437813 PRR27Q6MZM9 219 aa9.44□□□□□ -0.9
TNFRSF1A-203ENST00000437813 OR10G8Q8NGN5 311 aa9.44□□□□□ -0.9
TNFRSF1A-203ENST00000437813 BAALCQ8WXS3 180 aa9.44□□□□□ -0.9
TNFRSF1A-203ENST00000437813 MBD3L1Q8WWY6 194 aa9.43□□□□□ -0.9
TNFRSF1A-203ENST00000437813 CHCHD7Q9BUK0 85 aa9.43□□□□□ -0.9
TNFRSF1A-203ENST00000437813 SSBP4Q9BWG4 385 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF1A-203ENST00000437813 PHLDA3Q9Y5J5 127 aa9.43□□□□□ -0.9
TNFRSF1A-203ENST00000437813 COX11Q9Y6N1 276 aa9.43□□□□□ -0.9
TNFRSF1A-203ENST00000437813 TRBV7-3A0A075B6L6 115 aa9.42□□□□□ -0.9
TNFRSF1A-203ENST00000437813 TMSB15BA0A087X1C1 80 aa9.42□□□□□ -0.9
TNFRSF1A-203ENST00000437813 M0R381 172 aa9.42□□□□□ -0.9
TNFRSF1A-203ENST00000437813 PAGE4O60829 102 aa9.42□□□□□ -0.9
TNFRSF1A-203ENST00000437813 CXCL1P09341 107 aa9.42□□□□□ -0.9
TNFRSF1A-203ENST00000437813 TPT1P13693 172 aaKnown RBP9.42□□□□□ -0.9
TNFRSF1A-203ENST00000437813 UBE2G1P62253 170 aa9.42□□□□□ -0.9
TNFRSF1A-203ENST00000437813 LINC01620Q4KN68 170 aa9.42□□□□□ -0.9
TNFRSF1A-203ENST00000437813 ZFP82Q8N141 532 aa9.42□□□□□ -0.9
TNFRSF1A-203ENST00000437813 KCNRGQ8N5I3 272 aa9.42□□□□□ -0.9
TNFRSF1A-203ENST00000437813 KLK12Q9UKR0 248 aa9.42□□□□□ -0.9
TNFRSF1A-203ENST00000437813 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF1A-203ENST00000437813 SMLR1H3BR10 107 aa9.41□□□□□ -0.9
TNFRSF1A-203ENST00000437813 SNAI2O43623 268 aa9.41□□□□□ -0.9
TNFRSF1A-203ENST00000437813 ZNF345Q14585 488 aa9.41□□□□□ -0.9
TNFRSF1A-203ENST00000437813 CST9LP1Q5W188 147 aa9.41□□□□□ -0.9
TNFRSF1A-203ENST00000437813 SCXQ7RTU7 201 aa9.41□□□□□ -0.9
TNFRSF1A-203ENST00000437813 OR10AG1Q8NH19 301 aa9.41□□□□□ -0.9
TNFRSF1A-203ENST00000437813 SEC11BP0C7V7 166 aa9.4□□□□□ -0.9
TNFRSF1A-203ENST00000437813 AKR1C3P42330 323 aa9.4□□□□□ -0.9
TNFRSF1A-203ENST00000437813 RPL19P84098 196 aaKnown RBP9.4□□□□□ -0.9
TNFRSF1A-203ENST00000437813 ENHOQ6UWT2 76 aa9.4□□□□□ -0.9
TNFRSF1A-203ENST00000437813 LINC00528Q8N1L1 170 aa9.4□□□□□ -0.9
TNFRSF1A-203ENST00000437813 Q8N976 141 aa9.4□□□□□ -0.9
TNFRSF1A-203ENST00000437813 NEXN-AS1Q8NBZ9 246 aa9.4□□□□□ -0.9
TNFRSF1A-203ENST00000437813 KIF25-AS1Q9Y6Z4 181 aa9.4□□□□□ -0.9
TNFRSF1A-203ENST00000437813 TRBV6-8A0A0A6YYG3 113 aa9.39□□□□□ -0.91
TNFRSF1A-203ENST00000437813 SCO2A0A1W2PP80 73 aa9.39□□□□□ -0.91
TNFRSF1A-203ENST00000437813 RAB4BP61018 213 aa9.39□□□□□ -0.91
TNFRSF1A-203ENST00000437813 RPL36AP83881 106 aaKnown RBP9.39□□□□□ -0.91
TNFRSF1A-203ENST00000437813 STOML3Q8TAV4 291 aa9.39□□□□□ -0.91
TNFRSF1A-203ENST00000437813 RPL36ALQ969Q0 106 aaKnown RBP9.39□□□□□ -0.91
TNFRSF1A-203ENST00000437813 RMI2Q96E14 147 aa9.39□□□□□ -0.91
TNFRSF1A-203ENST00000437813 IGKV2D-24A0A075B6R9 120 aa9.38□□□□□ -0.91
TNFRSF1A-203ENST00000437813 KRTAP29-1A8MX34 341 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF1A-203ENST00000437813 S100A9P06702 114 aaKnown RBP9.38□□□□□ -0.91
TNFRSF1A-203ENST00000437813 OR5AL1P0C617 328 aa9.38□□□□□ -0.91
TNFRSF1A-203ENST00000437813 RGS21Q2M5E4 152 aa9.38□□□□□ -0.91
TNFRSF1A-203ENST00000437813 NTM-AS1Q6ZSK4 140 aa9.38□□□□□ -0.91
TNFRSF1A-203ENST00000437813 UBE2WQ96B02 151 aa9.38□□□□□ -0.91
TNFRSF1A-203ENST00000437813 CHAC1Q9BUX1 264 aa9.38□□□□□ -0.91
TNFRSF1A-203ENST00000437813 URGCP-MRPS24S4R325 110 aa9.38□□□□□ -0.91
TNFRSF1A-203ENST00000437813 A0A087WX48 190 aa9.37□□□□□ -0.91
TNFRSF1A-203ENST00000437813 HMSDA8MTL9 139 aa9.37□□□□□ -0.91
TNFRSF1A-203ENST00000437813 UMAD1C9J7I0 102 aa9.37□□□□□ -0.91
TNFRSF1A-203ENST00000437813 PLA2G1BP04054 148 aaKnown RBP9.37□□□□□ -0.91
TNFRSF1A-203ENST00000437813 MPV17L2Q567V2 206 aa9.37□□□□□ -0.91
TNFRSF1A-203ENST00000437813 KRTAP26-1Q6PEX3 210 aa9.37□□□□□ -0.91
TNFRSF1A-203ENST00000437813 SFT2D1Q8WV19 159 aa9.37□□□□□ -0.91
TNFRSF1A-203ENST00000437813 VAX2Q9UIW0 290 aa9.37□□□□□ -0.91
TNFRSF1A-203ENST00000437813 ELOBQ15370 118 aa9.36□□□□□ -0.91
TNFRSF1A-203ENST00000437813 BAGE2Q86Y30 109 aa9.36□□□□□ -0.91
TNFRSF1A-203ENST00000437813 FAM213BQ8TBF2 198 aa9.36□□□□□ -0.91
TNFRSF1A-203ENST00000437813 LRP1Q07954 4544 aaKnown RBP9.35□□□□□ -0.91
TNFRSF1A-203ENST00000437813 RBFOX3A6NFN3 312 aa9.35□□□□□ -0.91
TNFRSF1A-203ENST00000437813 Q0VG73 95 aa9.35□□□□□ -0.91
TNFRSF1A-203ENST00000437813 CIRBP-AS1Q8TBR5 109 aa9.35□□□□□ -0.91
TNFRSF1A-203ENST00000437813 C11orf52Q96A22 123 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms