RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 FABP2P12104 132 aa11.93□□□□□ -0.5
HLA-DQB2-231ENST00000435145 Q6YL49 198 aa11.93□□□□□ -0.5
HLA-DQB2-231ENST00000435145 A0A087WWL8 130 aa11.93□□□□□ -0.5
HLA-DQB2-231ENST00000435145 RIPPLY3P57055 190 aa11.93□□□□□ -0.5
HLA-DQB2-231ENST00000435145 SYNJ2BPP57105 145 aa11.93□□□□□ -0.5
HLA-DQB2-231ENST00000435145 UBE2E2Q96LR5 201 aa11.93□□□□□ -0.5
HLA-DQB2-231ENST00000435145 MDFICQ9P1T7 246 aa11.93□□□□□ -0.5
HLA-DQB2-231ENST00000435145 AMTNQ6UX39 209 aa11.92□□□□□ -0.5
HLA-DQB2-231ENST00000435145 NHP2Q9NX24 153 aaKnown RBP11.92□□□□□ -0.5
HLA-DQB2-231ENST00000435145 IGHV1OR15-1A0A075B7D0 117 aa11.91□□□□□ -0.5
HLA-DQB2-231ENST00000435145 Q8N1Y9 231 aa11.91□□□□□ -0.5
HLA-DQB2-231ENST00000435145 TMEM141Q96I45 108 aa11.91□□□□□ -0.5
HLA-DQB2-231ENST00000435145 TP53TG1Q9Y2A0 90 aa11.91□□□□□ -0.5
HLA-DQB2-231ENST00000435145 IGLV4-69A0A075B6H9 119 aa11.91□□□□□ -0.5
HLA-DQB2-231ENST00000435145 TRAV12-2A0A075B6T6 113 aa11.91□□□□□ -0.5
HLA-DQB2-231ENST00000435145 SDHAF1A6NFY7 115 aa11.91□□□□□ -0.5
HLA-DQB2-231ENST00000435145 COX6B1P14854 86 aa11.91□□□□□ -0.5
HLA-DQB2-231ENST00000435145 HOXD3P31249 432 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQB2-231ENST00000435145 MORN3Q6PF18 240 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQB2-231ENST00000435145 SYT8Q8NBV8 401 aa11.91□□□□□ -0.5
HLA-DQB2-231ENST00000435145 TIMM17AQ99595 171 aa11.91□□□□□ -0.5
HLA-DQB2-231ENST00000435145 KIR2DL4Q99706 377 aa11.91□□□□□ -0.5
HLA-DQB2-231ENST00000435145 PRADC1Q9BSG0 188 aa11.91□□□□□ -0.5
HLA-DQB2-231ENST00000435145 A0A1B0GWB2 263 aa11.9□□□□□ -0.5
HLA-DQB2-231ENST00000435145 K7ERU9 68 aa11.9□□□□□ -0.5
HLA-DQB2-231ENST00000435145 M0QY20 66 aa11.9□□□□□ -0.5
HLA-DQB2-231ENST00000435145 FOXI2Q6ZQN5 318 aa11.9□□□□□ -0.5
HLA-DQB2-231ENST00000435145 MAPK1IP1LQ8NDC0 245 aa11.9□□□□□ -0.5
HLA-DQB2-231ENST00000435145 IGKV3-20P01619 116 aa11.89□□□□□ -0.51
HLA-DQB2-231ENST00000435145 IGHV4-31P0DP07 118 aa11.89□□□□□ -0.51
HLA-DQB2-231ENST00000435145 RNF151Q2KHN1 245 aa11.89□□□□□ -0.51
HLA-DQB2-231ENST00000435145 C12orf74Q32Q52 190 aa11.89□□□□□ -0.51
HLA-DQB2-231ENST00000435145 PAPPA-AS1Q5QFB9 102 aa11.89□□□□□ -0.51
HLA-DQB2-231ENST00000435145 HIST1H4GQ99525 98 aa11.89□□□□□ -0.51
HLA-DQB2-231ENST00000435145 F5H697 171 aa11.89□□□□□ -0.51
HLA-DQB2-231ENST00000435145 PCP4P48539 62 aa11.89□□□□□ -0.51
HLA-DQB2-231ENST00000435145 PMVKQ15126 192 aa11.89□□□□□ -0.51
HLA-DQB2-231ENST00000435145 SPINK13Q1W4C9 94 aa11.89□□□□□ -0.51
HLA-DQB2-231ENST00000435145 ZNF256Q9Y2P7 627 aaPredicted RBP11.89□□□□□ -0.51
HLA-DQB2-231ENST00000435145 C11orf86A6NJI1 115 aa11.88□□□□□ -0.51
HLA-DQB2-231ENST00000435145 IGLL5B9A064 214 aa11.88□□□□□ -0.51
HLA-DQB2-231ENST00000435145 A8MTW9 85 aa11.87□□□□□ -0.51
HLA-DQB2-231ENST00000435145 RPL39P62891 51 aaKnown RBP11.87□□□□□ -0.51
HLA-DQB2-231ENST00000435145 MAP1AP78559 2803 aaPredicted RBP11.87□□□□□ -0.51
HLA-DQB2-231ENST00000435145 NSUN5P1Q3KNT7 163 aa11.87□□□□□ -0.51
HLA-DQB2-231ENST00000435145 Q8N2B8 174 aa11.87□□□□□ -0.51
HLA-DQB2-231ENST00000435145 SAP30O75446 220 aa11.86□□□□□ -0.51
HLA-DQB2-231ENST00000435145 RHOHQ15669 191 aa11.86□□□□□ -0.51
HLA-DQB2-231ENST00000435145 FAM74A4Q5TZK3 123 aa11.86□□□□□ -0.51
HLA-DQB2-231ENST00000435145 DUX5Q96PT3 197 aa11.86□□□□□ -0.51
HLA-DQB2-231ENST00000435145 FBN2P35556 2912 aa11.86□□□□□ -0.51
HLA-DQB2-231ENST00000435145 TRGV11A0A075B6L2 103 aa11.86□□□□□ -0.51
HLA-DQB2-231ENST00000435145 HOXA3O43365 443 aaPredicted RBP11.86□□□□□ -0.51
HLA-DQB2-231ENST00000435145 TCTEX1D4Q5JR98 221 aa11.86□□□□□ -0.51
HLA-DQB2-231ENST00000435145 TRPT1Q86TN4 253 aaKnown RBP11.86□□□□□ -0.51
HLA-DQB2-231ENST00000435145 ZNF815PA8K554 130 aa11.85□□□□□ -0.51
HLA-DQB2-231ENST00000435145 ZNF56Q15929 161 aa11.85□□□□□ -0.51
HLA-DQB2-231ENST00000435145 ZNF876PQ49A33 203 aa11.85□□□□□ -0.51
HLA-DQB2-231ENST00000435145 EDA2RQ9HAV5 297 aa11.84□□□□□ -0.51
HLA-DQB2-231ENST00000435145 BEX4Q9NWD9 120 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB2-231ENST00000435145 AGRNO00468 2067 aa11.84□□□□□ -0.51
HLA-DQB2-231ENST00000435145 UTP20O75691 2785 aaKnown RBP11.84□□□□□ -0.51
HLA-DQB2-231ENST00000435145 USP9YO00507 2555 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB2-231ENST00000435145 RBMY1A1P0DJD3 496 aaKnown RBP11.84□□□□□ -0.51
HLA-DQB2-231ENST00000435145 RBMY1CP0DJD4 496 aa11.84□□□□□ -0.51
HLA-DQB2-231ENST00000435145 RBMY1FQ15415 496 aaKnown RBP11.84□□□□□ -0.51
HLA-DQB2-231ENST00000435145 ZNF479Q96JC4 524 aa11.84□□□□□ -0.51
HLA-DQB2-231ENST00000435145 VPS25Q9BRG1 176 aa11.84□□□□□ -0.51
HLA-DQB2-231ENST00000435145 CHD6Q8TD26 2715 aa11.84□□□□□ -0.51
HLA-DQB2-231ENST00000435145 MYO18BQ8IUG5 2567 aa11.83□□□□□ -0.52
HLA-DQB2-231ENST00000435145 TRAV2A0A0B4J234 112 aa11.83□□□□□ -0.52
HLA-DQB2-231ENST00000435145 P0DMU3 169 aa11.83□□□□□ -0.52
HLA-DQB2-231ENST00000435145 FAM231AP0DMU4 169 aa11.83□□□□□ -0.52
HLA-DQB2-231ENST00000435145 FAM231CP0DMU5 169 aa11.83□□□□□ -0.52
HLA-DQB2-231ENST00000435145 HERVK_113P61574 105 aa11.83□□□□□ -0.52
HLA-DQB2-231ENST00000435145 RRN3P1Q2M238 152 aa11.83□□□□□ -0.52
HLA-DQB2-231ENST00000435145 CD300EQ496F6 205 aaPredicted RBP11.83□□□□□ -0.52
HLA-DQB2-231ENST00000435145 PLEKHB2Q96CS7 222 aa11.83□□□□□ -0.52
HLA-DQB2-231ENST00000435145 CRYBG3Q68DQ2 2970 aa11.83□□□□□ -0.52
HLA-DQB2-231ENST00000435145 G3V4G9 280 aa11.82□□□□□ -0.52
HLA-DQB2-231ENST00000435145 PRB1P04280 392 aa11.82□□□□□ -0.52
HLA-DQB2-231ENST00000435145 NFE4Q86UQ8 179 aa11.82□□□□□ -0.52
HLA-DQB2-231ENST00000435145 DEFB104AQ8WTQ1 72 aa11.82□□□□□ -0.52
HLA-DQB2-231ENST00000435145 ANKRD17O75179 2603 aaKnown RBP11.82□□□□□ -0.52
HLA-DQB2-231ENST00000435145 CR1P17927 2039 aa11.82□□□□□ -0.52
HLA-DQB2-231ENST00000435145 SLURP1P55000 103 aa11.82□□□□□ -0.52
HLA-DQB2-231ENST00000435145 C18orf65Q6ZTR6 163 aa11.82□□□□□ -0.52
HLA-DQB2-231ENST00000435145 ZNRF2Q8NHG8 242 aa11.82□□□□□ -0.52
HLA-DQB2-231ENST00000435145 EMP1P54849 157 aa11.81□□□□□ -0.52
HLA-DQB2-231ENST00000435145 KRTAP10-9P60411 292 aa11.81□□□□□ -0.52
HLA-DQB2-231ENST00000435145 KLHL30-AS1Q8NEE0 82 aa11.81□□□□□ -0.52
HLA-DQB2-231ENST00000435145 BBC3Q96PG8 261 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQB2-231ENST00000435145 PRRC2AP48634 2157 aaKnown RBP11.81□□□□□ -0.52
HLA-DQB2-231ENST00000435145 KNCNA6PVL3 124 aa11.81□□□□□ -0.52
HLA-DQB2-231ENST00000435145 Q5PR19 223 aa11.81□□□□□ -0.52
HLA-DQB2-231ENST00000435145 LRRC75A-AS1Q8N1F1 130 aa11.81□□□□□ -0.52
HLA-DQB2-231ENST00000435145 C20orf203Q8NBC4 194 aa11.81□□□□□ -0.52
HLA-DQB2-231ENST00000435145 SPAG8Q99932 426 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQB2-231ENST00000435145 A0A0J9YY99 117 aa11.8□□□□□ -0.52
HLA-DQB2-231ENST00000435145 H3BMM0 161 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms