RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 IGHV3-53P01767 116 aa9.13□□□□□ -0.95
CLDN4-203ENST00000435050 CD28P10747 220 aa9.13□□□□□ -0.95
CLDN4-203ENST00000435050 DCANP1Q8TF63 244 aa9.13□□□□□ -0.95
CLDN4-203ENST00000435050 K7EQG2 157 aa9.12□□□□□ -0.95
CLDN4-203ENST00000435050 IGKCP01834 107 aa9.12□□□□□ -0.95
CLDN4-203ENST00000435050 JMJD8Q96S16 334 aa9.12□□□□□ -0.95
CLDN4-203ENST00000435050 DPM2O94777 84 aa9.12□□□□□ -0.95
CLDN4-203ENST00000435050 ORMDL2Q53FV1 153 aa9.12□□□□□ -0.95
CLDN4-203ENST00000435050 C12orf54Q6X4T0 127 aa9.12□□□□□ -0.95
CLDN4-203ENST00000435050 MRAP2Q96G30 205 aa9.12□□□□□ -0.95
CLDN4-203ENST00000435050 NAA38Q9BRA0 125 aaKnown RBP9.12□□□□□ -0.95
CLDN4-203ENST00000435050 TTTY13Q9BZ97 58 aa9.12□□□□□ -0.95
CLDN4-203ENST00000435050 TRGV11A0A075B6L2 103 aa9.11□□□□□ -0.95
CLDN4-203ENST00000435050 SMAGPQ0VAQ4 97 aa9.11□□□□□ -0.95
CLDN4-203ENST00000435050 TMEM170BQ5T4T1 132 aa9.11□□□□□ -0.95
CLDN4-203ENST00000435050 OR11H12B2RN74 326 aa9.11□□□□□ -0.95
CLDN4-203ENST00000435050 C2orf66Q6UXQ4 117 aa9.11□□□□□ -0.95
CLDN4-203ENST00000435050 FOXI2Q6ZQN5 318 aa9.11□□□□□ -0.95
CLDN4-203ENST00000435050 PSMG3-AS1Q96PY0 264 aa9.11□□□□□ -0.95
CLDN4-203ENST00000435050 DGAT2L7PQ6IED9 249 aa9.11□□□□□ -0.95
CLDN4-203ENST00000435050 MRPL35Q9NZE8 188 aaKnown RBP9.11□□□□□ -0.95
CLDN4-203ENST00000435050 TNFRSF18Q9Y5U5 241 aa9.11□□□□□ -0.95
CLDN4-203ENST00000435050 SDHAF1A6NFY7 115 aa9.1□□□□□ -0.95
CLDN4-203ENST00000435050 CYSLTR1Q9Y271 337 aa9.1□□□□□ -0.95
CLDN4-203ENST00000435050 TMEM89A2RUT3 159 aa9.1□□□□□ -0.95
CLDN4-203ENST00000435050 CFHR3Q02985 330 aa9.1□□□□□ -0.95
CLDN4-203ENST00000435050 SOCS3O14543 225 aa9.1□□□□□ -0.95
CLDN4-203ENST00000435050 CD5LO43866 347 aa9.1□□□□□ -0.95
CLDN4-203ENST00000435050 PPP1R17O96001 155 aa9.1□□□□□ -0.95
CLDN4-203ENST00000435050 LINC01545Q5VT33 79 aa9.09□□□□□ -0.95
CLDN4-203ENST00000435050 GATD1Q8NB37 220 aa9.09□□□□□ -0.95
CLDN4-203ENST00000435050 A0A096LNT2 108 aa9.09□□□□□ -0.95
CLDN4-203ENST00000435050 PHLDA1Q8WV24 401 aaPredicted RBP9.09□□□□□ -0.95
CLDN4-203ENST00000435050 PCP2Q8IVA1 136 aa9.09□□□□□ -0.95
CLDN4-203ENST00000435050 TP53TG1Q9Y2A0 90 aa9.09□□□□□ -0.95
CLDN4-203ENST00000435050 TRGV1A0A0A0MS02 117 aa9.09□□□□□ -0.96
CLDN4-203ENST00000435050 GAGE1Q13065 139 aa9.09□□□□□ -0.96
CLDN4-203ENST00000435050 OR11H2Q8NH07 326 aa9.09□□□□□ -0.96
CLDN4-203ENST00000435050 IGHV3-64A0A075B6Q5 118 aa9.08□□□□□ -0.96
CLDN4-203ENST00000435050 RNASE3P12724 160 aaKnown RBP9.08□□□□□ -0.96
CLDN4-203ENST00000435050 LGALS9BQ3B8N2 356 aa9.08□□□□□ -0.96
CLDN4-203ENST00000435050 LGALS9CQ6DKI2 356 aa9.08□□□□□ -0.96
CLDN4-203ENST00000435050 SUMO4Q6EEV6 95 aa9.08□□□□□ -0.96
CLDN4-203ENST00000435050 MRPL16Q9NX20 251 aaKnown RBP9.08□□□□□ -0.96
CLDN4-203ENST00000435050 C4orf3Q8WVX3 66 aa9.08□□□□□ -0.96
CLDN4-203ENST00000435050 SRSF9Q13242 221 aaKnown RBP eCLIP9.07□□□□□ -0.96
CLDN4-203ENST00000435050 BOD1L2Q8IYS8 172 aa9.07□□□□□ -0.96
CLDN4-203ENST00000435050 IGHV3-38A0A0C4DH36 116 aa9.07□□□□□ -0.96
CLDN4-203ENST00000435050 VCYO14598 125 aa9.07□□□□□ -0.96
CLDN4-203ENST00000435050 COX8CQ7Z4L0 72 aa9.07□□□□□ -0.96
CLDN4-203ENST00000435050 INSP01308 110 aa9.07□□□□□ -0.96
CLDN4-203ENST00000435050 RBX1P62877 108 aa9.07□□□□□ -0.96
CLDN4-203ENST00000435050 RASL10AQ92737 203 aa9.07□□□□□ -0.96
CLDN4-203ENST00000435050 U3KQK5 164 aa9.07□□□□□ -0.96
CLDN4-203ENST00000435050 ZNF415Q09FC8 603 aa9.06□□□□□ -0.96
CLDN4-203ENST00000435050 RRN3P1Q2M238 152 aa9.06□□□□□ -0.96
CLDN4-203ENST00000435050 HIST1H4GQ99525 98 aa9.06□□□□□ -0.96
CLDN4-203ENST00000435050 J3QR89 54 aa9.06□□□□□ -0.96
CLDN4-203ENST00000435050 H7C1H1 209 aa9.06□□□□□ -0.96
CLDN4-203ENST00000435050 RPL39P62891 51 aaKnown RBP9.06□□□□□ -0.96
CLDN4-203ENST00000435050 MRPS16Q9Y3D3 137 aaKnown RBP9.06□□□□□ -0.96
CLDN4-203ENST00000435050 ITPR2Q14571 2701 aa9.06□□□□□ -0.96
CLDN4-203ENST00000435050 TRGV2A0A075B6R0 118 aa9.05□□□□□ -0.96
CLDN4-203ENST00000435050 HERVK_113P61574 105 aa9.05□□□□□ -0.96
CLDN4-203ENST00000435050 LGALS9O00182 355 aa9.05□□□□□ -0.96
CLDN4-203ENST00000435050 MAP6D1Q9H9H5 199 aa9.05□□□□□ -0.96
CLDN4-203ENST00000435050 ESM1Q9NQ30 184 aa9.05□□□□□ -0.96
CLDN4-203ENST00000435050 TSSC4Q9Y5U2 329 aaPredicted RBP9.05□□□□□ -0.96
CLDN4-203ENST00000435050 A0A096LNJ9 63 aa9.05□□□□□ -0.96
CLDN4-203ENST00000435050 A6NDN8 102 aa9.05□□□□□ -0.96
CLDN4-203ENST00000435050 COX8AP10176 69 aa9.05□□□□□ -0.96
CLDN4-203ENST00000435050 CNFNQ9BYD5 112 aa9.05□□□□□ -0.96
CLDN4-203ENST00000435050 IGKV3OR2-268A0A0C4DH90 116 aa9.05□□□□□ -0.96
CLDN4-203ENST00000435050 CKS1BP61024 79 aa9.05□□□□□ -0.96
CLDN4-203ENST00000435050 KLLNB2CW77 178 aa9.04□□□□□ -0.96
CLDN4-203ENST00000435050 RNASE13Q5GAN3 156 aaKnown RBP9.04□□□□□ -0.96
CLDN4-203ENST00000435050 P0DMU3 169 aa9.04□□□□□ -0.96
CLDN4-203ENST00000435050 FAM231AP0DMU4 169 aa9.04□□□□□ -0.96
CLDN4-203ENST00000435050 FAM231CP0DMU5 169 aa9.04□□□□□ -0.96
CLDN4-203ENST00000435050 DEFB114Q30KQ6 69 aa9.04□□□□□ -0.96
CLDN4-203ENST00000435050 OCIAD2Q56VL3 154 aa9.04□□□□□ -0.96
CLDN4-203ENST00000435050 NRACQ8N912 160 aa9.04□□□□□ -0.96
CLDN4-203ENST00000435050 LINC01006Q8NI28 216 aa9.04□□□□□ -0.96
CLDN4-203ENST00000435050 GTSF1LQ9H1H1 148 aa9.04□□□□□ -0.96
CLDN4-203ENST00000435050 H3BMM0 161 aa9.04□□□□□ -0.96
CLDN4-203ENST00000435050 BRI3O95415 125 aa9.03□□□□□ -0.96
CLDN4-203ENST00000435050 UBE2V1Q13404 147 aa9.03□□□□□ -0.96
CLDN4-203ENST00000435050 KLK9Q2XQG4 91 aa9.03□□□□□ -0.96
CLDN4-203ENST00000435050 C20orf78Q9BR46 151 aa9.03□□□□□ -0.96
CLDN4-203ENST00000435050 SCRT2Q9NQ03 307 aa9.03□□□□□ -0.96
CLDN4-203ENST00000435050 SPAG8Q99932 426 aaPredicted RBP9.03□□□□□ -0.96
CLDN4-203ENST00000435050 APCP25054 2843 aa9.03□□□□□ -0.96
CLDN4-203ENST00000435050 UNC79Q9P2D8 2635 aa9.03□□□□□ -0.96
CLDN4-203ENST00000435050 K7EMI3 77 aa9.02□□□□□ -0.96
CLDN4-203ENST00000435050 ODF1Q14990 250 aa9.02□□□□□ -0.96
CLDN4-203ENST00000435050 ADAMTSL5Q6ZMM2 481 aa9.02□□□□□ -0.96
CLDN4-203ENST00000435050 WFDC10AQ9H1F0 79 aa9.02□□□□□ -0.96
CLDN4-203ENST00000435050 VCX2Q9H322 139 aa9.02□□□□□ -0.96
CLDN4-203ENST00000435050 HLA-DRB4P13762 266 aa9.02□□□□□ -0.97
CLDN4-203ENST00000435050 PROK1P58294 105 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms