RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 Q8N1Y9 231 aa7.74□□□□□ -1.17
CD44-210ENST00000434472 TEX29Q8N6K0 151 aa7.74□□□□□ -1.17
CD44-210ENST00000434472 HIST1H4GQ99525 98 aa7.74□□□□□ -1.17
CD44-210ENST00000434472 JPT2Q9H910 190 aa7.74□□□□□ -1.17
CD44-210ENST00000434472 PEMTQ9UBM1 199 aa7.74□□□□□ -1.17
CD44-210ENST00000434472 SPCS1Q9Y6A9 102 aa7.74□□□□□ -1.17
CD44-210ENST00000434472 CACNA1AO00555 2505 aa7.73□□□□□ -1.17
CD44-210ENST00000434472 TRAV12-2A0A075B6T6 113 aa7.73□□□□□ -1.17
CD44-210ENST00000434472 A8MTW9 85 aa7.73□□□□□ -1.17
CD44-210ENST00000434472 K7ERU9 68 aa7.73□□□□□ -1.17
CD44-210ENST00000434472 CRYGDP07320 174 aa7.73□□□□□ -1.17
CD44-210ENST00000434472 ZNF56Q15929 161 aa7.73□□□□□ -1.17
CD44-210ENST00000434472 SPINK13Q1W4C9 94 aa7.73□□□□□ -1.17
CD44-210ENST00000434472 AMTNQ6UX39 209 aa7.73□□□□□ -1.17
CD44-210ENST00000434472 DUX5Q96PT3 197 aa7.73□□□□□ -1.17
CD44-210ENST00000434472 MDFICQ9P1T7 246 aa7.73□□□□□ -1.17
CD44-210ENST00000434472 ZNF256Q9Y2P7 627 aaPredicted RBP7.73□□□□□ -1.17
CD44-210ENST00000434472 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.73□□□□□ -1.17
CD44-210ENST00000434472 RELNP78509 3460 aa7.72□□□□□ -1.17
CD44-210ENST00000434472 TRBV7-3A0A075B6L6 115 aa7.72□□□□□ -1.17
CD44-210ENST00000434472 M0QY20 66 aa7.72□□□□□ -1.17
CD44-210ENST00000434472 SCGB2A2Q13296 93 aa7.72□□□□□ -1.17
CD44-210ENST00000434472 NSUN5P1Q3KNT7 163 aa7.72□□□□□ -1.17
CD44-210ENST00000434472 NEGR1Q7Z3B1 354 aa7.72□□□□□ -1.17
CD44-210ENST00000434472 TMEM86BQ8N661 226 aa7.72□□□□□ -1.17
CD44-210ENST00000434472 MAPK1IP1LQ8NDC0 245 aa7.72□□□□□ -1.17
CD44-210ENST00000434472 PHLDA1Q8WV24 401 aaPredicted RBP7.72□□□□□ -1.17
CD44-210ENST00000434472 PRADC1Q9BSG0 188 aa7.72□□□□□ -1.17
CD44-210ENST00000434472 EDA2RQ9HAV5 297 aa7.72□□□□□ -1.17
CD44-210ENST00000434472 NHP2Q9NX24 153 aaKnown RBP7.72□□□□□ -1.17
CD44-210ENST00000434472 SPTAN1Q13813 2472 aaKnown RBP7.72□□□□□ -1.17
CD44-210ENST00000434472 C12orf74Q32Q52 190 aa7.71□□□□□ -1.17
CD44-210ENST00000434472 Q5PR19 223 aa7.71□□□□□ -1.17
CD44-210ENST00000434472 FAM74A4Q5TZK3 123 aa7.71□□□□□ -1.17
CD44-210ENST00000434472 TMEM238LA0A1B0GVL6 79 aa7.7□□□□□ -1.18
CD44-210ENST00000434472 C11orf86A6NJI1 115 aa7.7□□□□□ -1.18
CD44-210ENST00000434472 A6NJY4 79 aa7.7□□□□□ -1.18
CD44-210ENST00000434472 TSHBP01222 138 aa7.7□□□□□ -1.18
CD44-210ENST00000434472 PIK3CD-AS1Q5SR53 167 aa7.7□□□□□ -1.18
CD44-210ENST00000434472 C4orf3Q8WVX3 66 aa7.7□□□□□ -1.18
CD44-210ENST00000434472 PTH2Q96A98 100 aa7.7□□□□□ -1.18
CD44-210ENST00000434472 NAA38Q9BRA0 125 aaKnown RBP7.7□□□□□ -1.18
CD44-210ENST00000434472 IGLV4-69A0A075B6H9 119 aa7.7□□□□□ -1.18
CD44-210ENST00000434472 A0A1B0GWB2 263 aa7.7□□□□□ -1.18
CD44-210ENST00000434472 ZNF815PA8K554 130 aa7.7□□□□□ -1.18
CD44-210ENST00000434472 IGLL5B9A064 214 aa7.7□□□□□ -1.18
CD44-210ENST00000434472 I3L3M4 83 aa7.7□□□□□ -1.18
CD44-210ENST00000434472 PRB1P04280 392 aa7.7□□□□□ -1.18
CD44-210ENST00000434472 ZNF876PQ49A33 203 aa7.7□□□□□ -1.18
CD44-210ENST00000434472 MORN3Q6PF18 240 aaPredicted RBP7.7□□□□□ -1.18
CD44-210ENST00000434472 ZNF843Q8N446 348 aa7.7□□□□□ -1.18
CD44-210ENST00000434472 MUC4Q99102 2169 aa7.69□□□□□ -1.18
CD44-210ENST00000434472 SLURP1P55000 103 aa7.69□□□□□ -1.18
CD44-210ENST00000434472 DEFB131AP59861 70 aa7.69□□□□□ -1.18
CD44-210ENST00000434472 RNF151Q2KHN1 245 aa7.69□□□□□ -1.18
CD44-210ENST00000434472 LINC00467Q9BRT7 94 aa7.69□□□□□ -1.18
CD44-210ENST00000434472 KNCNA6PVL3 124 aa7.68□□□□□ -1.18
CD44-210ENST00000434472 H3BMM0 161 aa7.68□□□□□ -1.18
CD44-210ENST00000434472 K7ERJ3 54 aa7.68□□□□□ -1.18
CD44-210ENST00000434472 RPL39P62891 51 aaKnown RBP7.68□□□□□ -1.18
CD44-210ENST00000434472 ZNF415Q09FC8 603 aa7.68□□□□□ -1.18
CD44-210ENST00000434472 CD300EQ496F6 205 aaPredicted RBP7.68□□□□□ -1.18
CD44-210ENST00000434472 SCGB1D4Q6XE38 83 aa7.68□□□□□ -1.18
CD44-210ENST00000434472 NFE4Q86UQ8 179 aa7.68□□□□□ -1.18
CD44-210ENST00000434472 ZNF479Q96JC4 524 aa7.68□□□□□ -1.18
CD44-210ENST00000434472 Q96MF0 132 aa7.68□□□□□ -1.18
CD44-210ENST00000434472 SPAG8Q99932 426 aaPredicted RBP7.68□□□□□ -1.18
CD44-210ENST00000434472 A8MWV9 139 aa7.67□□□□□ -1.18
CD44-210ENST00000434472 C20orf203Q8NBC4 194 aa7.67□□□□□ -1.18
CD44-210ENST00000434472 DYNLRB2Q8TF09 96 aa7.67□□□□□ -1.18
CD44-210ENST00000434472 RAX2Q96IS3 184 aa7.67□□□□□ -1.18
CD44-210ENST00000434472 BBC3Q96PG8 261 aaPredicted RBP7.67□□□□□ -1.18
CD44-210ENST00000434472 VPS25Q9BRG1 176 aa7.67□□□□□ -1.18
CD44-210ENST00000434472 M0R2P5 195 aa7.67□□□□□ -1.18
CD44-210ENST00000434472 CRYBA4P53673 196 aa7.67□□□□□ -1.18
CD44-210ENST00000434472 KRTAP10-9P60411 292 aa7.67□□□□□ -1.18
CD44-210ENST00000434472 RRN3P1Q2M238 152 aa7.67□□□□□ -1.18
CD44-210ENST00000434472 CLUHP3Q96NS8 147 aa7.67□□□□□ -1.18
CD44-210ENST00000434472 DUX3Q96PT4 197 aa7.67□□□□□ -1.18
CD44-210ENST00000434472 SPANXB1Q9NS25 103 aaPredicted RBP7.67□□□□□ -1.18
CD44-210ENST00000434472 TRAV25A0A0B4J276 109 aa7.66□□□□□ -1.18
CD44-210ENST00000434472 SRSF9Q13242 221 aaKnown RBP eCLIP7.66□□□□□ -1.18
CD44-210ENST00000434472 TMEM170BQ5T4T1 132 aa7.66□□□□□ -1.18
CD44-210ENST00000434472 SPXQ9BT56 116 aa7.66□□□□□ -1.18
CD44-210ENST00000434472 PYGO1Q9Y3Y4 419 aa7.66□□□□□ -1.18
CD44-210ENST00000434472 CFAP46Q8IYW2 2715 aa7.65□□□□□ -1.18
CD44-210ENST00000434472 F8W1H4 67 aa7.65□□□□□ -1.18
CD44-210ENST00000434472 RHODO00212 210 aa7.65□□□□□ -1.18
CD44-210ENST00000434472 LEPROTO15243 131 aa7.65□□□□□ -1.18
CD44-210ENST00000434472 RBMY1A1P0DJD3 496 aaKnown RBP7.65□□□□□ -1.18
CD44-210ENST00000434472 RBMY1CP0DJD4 496 aa7.65□□□□□ -1.18
CD44-210ENST00000434472 P0DMU3 169 aa7.65□□□□□ -1.18
CD44-210ENST00000434472 FAM231AP0DMU4 169 aa7.65□□□□□ -1.18
CD44-210ENST00000434472 FAM231CP0DMU5 169 aa7.65□□□□□ -1.18
CD44-210ENST00000434472 LGALS3P17931 250 aaKnown RBP7.65□□□□□ -1.18
CD44-210ENST00000434472 RBMY1FQ15415 496 aaKnown RBP7.65□□□□□ -1.18
CD44-210ENST00000434472 DEFB136Q30KP8 78 aa7.65□□□□□ -1.18
CD44-210ENST00000434472 C18orf65Q6ZTR6 163 aa7.65□□□□□ -1.18
CD44-210ENST00000434472 TMEM61Q8N0U2 210 aa7.65□□□□□ -1.18
CD44-210ENST00000434472 MAP6D1Q9H9H5 199 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms