RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 PSMG3Q9BT73 122 aaPredicted RBP3.74□□□□□ -1.81
HDAC9-213ENST00000433709 MED28Q9H204 178 aa3.74□□□□□ -1.81
HDAC9-213ENST00000433709 Q9H3A6 140 aa3.74□□□□□ -1.81
HDAC9-213ENST00000433709 TMEM167BQ9NRX6 74 aa3.74□□□□□ -1.81
HDAC9-213ENST00000433709 MBD2Q9UBB5 411 aa3.74□□□□□ -1.81
HDAC9-213ENST00000433709 HHLA3Q9XRX5 114 aa3.74□□□□□ -1.81
HDAC9-213ENST00000433709 MRPS16Q9Y3D3 137 aaKnown RBP3.74□□□□□ -1.81
HDAC9-213ENST00000433709 KLF12Q9Y4X4 402 aa3.74□□□□□ -1.81
HDAC9-213ENST00000433709 TRGV4A0A0C4DH28 118 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 PGPA6NDG6 321 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 C9JCJ5 164 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 M0R3E3 92 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 TAAR5O14804 337 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 RTL8CO15255 209 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 SIVA1O15304 175 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 SIX6O95475 246 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 OR10J4P0C629 311 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 PPT1P50897 306 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 H2BFSP57053 126 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 SSTP61278 116 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 ERCC8Q13216 396 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 TDRG1Q3Y452 100 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 Q6AWC8 147 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 MIR17HGQ75NE6 70 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 C10orf126Q8N4M7 172 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 ZFAND2AQ8N6M9 145 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 OR10G4Q8NGN3 311 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 OR10G9Q8NGN4 311 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 OR2G3Q8NGZ4 309 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 FXYD5Q96DB9 178 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 OR5AC2Q9NZP5 309 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 TNFSF18Q9UNG2 199 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 LINC00588Q9Y4M8 146 aa3.73□□□□□ -1.81
HDAC9-213ENST00000433709 IGKV2-40A0A087WW87 121 aaPredicted RBP3.72□□□□□ -1.81
HDAC9-213ENST00000433709 A0A0J9YY99 117 aa3.72□□□□□ -1.81
HDAC9-213ENST00000433709 F6UZH7 168 aa3.72□□□□□ -1.81
HDAC9-213ENST00000433709 M0R2P5 195 aa3.72□□□□□ -1.81
HDAC9-213ENST00000433709 CXorf1O96002 111 aa3.72□□□□□ -1.81
HDAC9-213ENST00000433709 IGKV2D-40P01614 121 aaPredicted RBP3.72□□□□□ -1.81
HDAC9-213ENST00000433709 EVI2AP22794 236 aa3.72□□□□□ -1.81
HDAC9-213ENST00000433709 SRIP30626 198 aa3.72□□□□□ -1.81
HDAC9-213ENST00000433709 CDC34P49427 236 aaPredicted RBP3.72□□□□□ -1.81
HDAC9-213ENST00000433709 BTN1A1Q13410 526 aa3.72□□□□□ -1.81
HDAC9-213ENST00000433709 Q6ZTI0 123 aa3.72□□□□□ -1.81
HDAC9-213ENST00000433709 C5orf17Q8NAS9 161 aa3.72□□□□□ -1.81
HDAC9-213ENST00000433709 C11orf72Q8NBR9 251 aa3.72□□□□□ -1.81
HDAC9-213ENST00000433709 HYLS1Q96M11 299 aa3.72□□□□□ -1.81
HDAC9-213ENST00000433709 AQP10Q96PS8 301 aa3.72□□□□□ -1.81
HDAC9-213ENST00000433709 TCEAL7Q9BRU2 100 aa3.72□□□□□ -1.81
HDAC9-213ENST00000433709 ACTR3CQ9C0K3 210 aaPredicted RBP3.72□□□□□ -1.81
HDAC9-213ENST00000433709 TREM1Q9NP99 234 aa3.72□□□□□ -1.81
HDAC9-213ENST00000433709 ANAPC11Q9NYG5 84 aa3.72□□□□□ -1.81
HDAC9-213ENST00000433709 TRAV4A0A0B4J268 109 aa3.71□□□□□ -1.82
HDAC9-213ENST00000433709 C16orf90A8MZG2 172 aa3.71□□□□□ -1.82
HDAC9-213ENST00000433709 PRM2P04554 102 aa3.71□□□□□ -1.82
HDAC9-213ENST00000433709 PFN1P07737 140 aaKnown RBP3.71□□□□□ -1.82
HDAC9-213ENST00000433709 GIPP09681 153 aaPredicted RBP3.71□□□□□ -1.82
HDAC9-213ENST00000433709 SEC11BP0C7V7 166 aa3.71□□□□□ -1.82
HDAC9-213ENST00000433709 STAG3L2P0CL84 134 aa3.71□□□□□ -1.82
HDAC9-213ENST00000433709 STAG3L3P0CL85 134 aa3.71□□□□□ -1.82
HDAC9-213ENST00000433709 CRYBA4P53673 196 aa3.71□□□□□ -1.82
HDAC9-213ENST00000433709 EIF5AP63241 154 aaKnown RBP3.71□□□□□ -1.82
HDAC9-213ENST00000433709 ESRGQ1W209 222 aa3.71□□□□□ -1.82
HDAC9-213ENST00000433709 GCSAMLQ5JQS6 135 aa3.71□□□□□ -1.82
HDAC9-213ENST00000433709 OR4C5Q8NGB2 326 aa3.71□□□□□ -1.82
HDAC9-213ENST00000433709 STOML3Q8TAV4 291 aa3.71□□□□□ -1.82
HDAC9-213ENST00000433709 PTH2Q96A98 100 aa3.71□□□□□ -1.82
HDAC9-213ENST00000433709 PRADC1Q9BSG0 188 aa3.71□□□□□ -1.82
HDAC9-213ENST00000433709 SMIM3Q9BZL3 60 aa3.71□□□□□ -1.82
HDAC9-213ENST00000433709 LY96Q9Y6Y9 160 aa3.71□□□□□ -1.82
HDAC9-213ENST00000433709 DNAH9Q9NYC9 4486 aa3.71□□□□□ -1.82
HDAC9-213ENST00000433709 A0A096LPF7 62 aa3.7□□□□□ -1.82
HDAC9-213ENST00000433709 TRAV8-6A0A0B4J262 113 aa3.7□□□□□ -1.82
HDAC9-213ENST00000433709 A0A1W2PRE2 83 aa3.7□□□□□ -1.82
HDAC9-213ENST00000433709 HMGB3O15347 200 aaKnown RBP3.7□□□□□ -1.82
HDAC9-213ENST00000433709 MGST1P10620 155 aaKnown RBP3.7□□□□□ -1.82
HDAC9-213ENST00000433709 IFITM3Q01628 133 aa3.7□□□□□ -1.82
HDAC9-213ENST00000433709 TMEM183BQ1AE95 376 aa3.7□□□□□ -1.82
HDAC9-213ENST00000433709 SMUG1Q53HV7 270 aa3.7□□□□□ -1.82
HDAC9-213ENST00000433709 GOLT1AQ6ZVE7 132 aa3.7□□□□□ -1.82
HDAC9-213ENST00000433709 TMEM183AQ8IXX5 376 aa3.7□□□□□ -1.82
HDAC9-213ENST00000433709 CEND1Q8N111 149 aa3.7□□□□□ -1.82
HDAC9-213ENST00000433709 CYB561D1Q8N8Q1 229 aa3.7□□□□□ -1.82
HDAC9-213ENST00000433709 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.7□□□□□ -1.82
HDAC9-213ENST00000433709 HIST1H2BAQ96A08 127 aa3.7□□□□□ -1.82
HDAC9-213ENST00000433709 CTXND1A0A1B0GTU2 59 aa3.69□□□□□ -1.82
HDAC9-213ENST00000433709 TRBV6-4A0A1B0GX49 114 aa3.69□□□□□ -1.82
HDAC9-213ENST00000433709 FABP5P3A8MUU1 101 aa3.69□□□□□ -1.82
HDAC9-213ENST00000433709 A8MWV9 139 aa3.69□□□□□ -1.82
HDAC9-213ENST00000433709 IFNA7P01567 189 aa3.69□□□□□ -1.82
HDAC9-213ENST00000433709 TCRAP04437 139 aa3.69□□□□□ -1.82
HDAC9-213ENST00000433709 S100A9P06702 114 aaKnown RBP3.69□□□□□ -1.82
HDAC9-213ENST00000433709 ARL14EPLP0DKL9 152 aa3.69□□□□□ -1.82
HDAC9-213ENST00000433709 S100A4P26447 101 aaKnown RBP3.69□□□□□ -1.82
HDAC9-213ENST00000433709 GCHFRP30047 84 aa3.69□□□□□ -1.82
HDAC9-213ENST00000433709 FGF8P55075 233 aaPredicted RBP3.69□□□□□ -1.82
HDAC9-213ENST00000433709 FLI1Q01543 452 aaPredicted RBP3.69□□□□□ -1.82
HDAC9-213ENST00000433709 RHOHQ15669 191 aa3.69□□□□□ -1.82
HDAC9-213ENST00000433709 AKR1C8PQ5T2L2 129 aa3.69□□□□□ -1.82
HDAC9-213ENST00000433709 LYPD5Q6UWN5 251 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms