RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 TXNDC17Q9BRA2 123 aa2.22□□□□□ -2.05
PTPN4-204ENST00000431283 LINC00467Q9BRT7 94 aa2.22□□□□□ -2.05
PTPN4-204ENST00000431283 GGACTQ9BVM4 153 aa2.22□□□□□ -2.05
PTPN4-204ENST00000431283 PARD6GQ9BYG4 376 aaPredicted RBP2.22□□□□□ -2.05
PTPN4-204ENST00000431283 CCDC59Q9P031 241 aaKnown RBP2.22□□□□□ -2.05
PTPN4-204ENST00000431283 TRAV8-6A0A0B4J262 113 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 FABP12A6NFH5 140 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 FAM74A7A6NL05 159 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 C9JCJ5 164 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 K7EPK0 472 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 AGPAT2O15120 278 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 SSSCA1O60232 199 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 C1QBP02746 253 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 NMBP08949 121 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 OR4E1P0C645 316 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 METTL15P1P0C7V9 234 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 IGLC2P0DOY2 106 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 PRB4P10163 310 aaPredicted RBP2.21□□□□□ -2.06
PTPN4-204ENST00000431283 HIST1H1EP10412 219 aaKnown RBP2.21□□□□□ -2.06
PTPN4-204ENST00000431283 PPT1P50897 306 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 CRYBA4P53673 196 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 TCL1AP56279 114 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 TAS2R30P59541 319 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 KRTAP12-4P60329 112 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 UBE2MP61081 183 aaKnown RBP2.21□□□□□ -2.06
PTPN4-204ENST00000431283 HAMPP81172 84 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 SLC38A11Q08AI6 406 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 TDRG1Q3Y452 100 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 FAM74A3Q4VXF1 159 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 IBA57Q5T440 356 aaKnown RBP2.21□□□□□ -2.06
PTPN4-204ENST00000431283 TMEM78Q5T7P6 136 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 PATE2Q6UY27 113 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 Q8N814 137 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 C11orf72Q8NBR9 251 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 OR1L4Q8NGR5 311 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 MCFD2Q8NI22 146 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 DYNC2LI1Q8TCX1 351 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 SMIM8Q96KF7 97 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 PFDN5Q99471 154 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 MRPL32Q9BYC8 188 aaKnown RBP2.21□□□□□ -2.06
PTPN4-204ENST00000431283 C20orf85Q9H1P6 137 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 SH3BGRL3Q9H299 93 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 WFDC1Q9HC57 220 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 PRELID1Q9Y255 219 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 RCL1Q9Y2P8 373 aaKnown RBP2.21□□□□□ -2.06
PTPN4-204ENST00000431283 KLF12Q9Y4X4 402 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 TIMM9Q9Y5J7 89 aa2.21□□□□□ -2.06
PTPN4-204ENST00000431283 TRBV19A0A075B6N1 114 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 LINC00854A0A1B0GVQ3 168 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 H3BMQ9 156 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 H3BQ15 152 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 L7N2F9 121 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 SLC17A3O00476 420 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 MRPS12O15235 138 aaKnown RBP2.2□□□□□ -2.06
PTPN4-204ENST00000431283 NOL3O60936 208 aaKnown RBP2.2□□□□□ -2.06
PTPN4-204ENST00000431283 OXTP01178 125 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 PFN1P07737 140 aaKnown RBP2.2□□□□□ -2.06
PTPN4-204ENST00000431283 CHTF8P0CG12 524 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 CSN1S1P47710 185 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 CAMLGP49069 296 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 INPP1P49441 399 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 ERCC8Q13216 396 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 BTN1A1Q13410 526 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 PPP1R1AQ13522 171 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 PDE6HQ13956 83 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 PYDC2Q56P42 97 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 LINC01556Q5JQF7 62 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 OR10J3Q5JRS4 329 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 PRR9Q5T870 116 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 TMEM14EPQ6UXP3 125 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 WFDC10BQ8IUB3 73 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 IQCF2Q8IXL9 164 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 OR4C5Q8NGB2 326 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 RAB2BQ8WUD1 216 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 HIST1H4GQ99525 98 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 SRRQ9GZT4 340 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 NAA50Q9GZZ1 169 aaKnown RBP2.2□□□□□ -2.06
PTPN4-204ENST00000431283 SLC25A31Q9H0C2 315 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 AGPAT4-IT1Q9H0P7 198 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 MIXL1Q9H2W2 232 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 SLC39A9Q9NUM3 307 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 MRPL16Q9NX20 251 aaKnown RBP2.2□□□□□ -2.06
PTPN4-204ENST00000431283 GSKIPQ9P0R6 139 aa2.2□□□□□ -2.06
PTPN4-204ENST00000431283 TRAV8-3A0A0A6YYJ7 113 aa2.19□□□□□ -2.06
PTPN4-204ENST00000431283 C9orf170A2RU37 121 aa2.19□□□□□ -2.06
PTPN4-204ENST00000431283 RBFOX3A6NFN3 312 aa2.19□□□□□ -2.06
PTPN4-204ENST00000431283 CENPXA8MT69 81 aa2.19□□□□□ -2.06
PTPN4-204ENST00000431283 IBA57-AS1B1ANH7 110 aa2.19□□□□□ -2.06
PTPN4-204ENST00000431283 M0R3E3 92 aa2.19□□□□□ -2.06
PTPN4-204ENST00000431283 SFTA3P0C7M3 94 aa2.19□□□□□ -2.06
PTPN4-204ENST00000431283 SEC11BP0C7V7 166 aa2.19□□□□□ -2.06
PTPN4-204ENST00000431283 PVALBP20472 110 aaPredicted RBP2.19□□□□□ -2.06
PTPN4-204ENST00000431283 S100A5P33763 92 aa2.19□□□□□ -2.06
PTPN4-204ENST00000431283 BCAP31P51572 246 aa2.19□□□□□ -2.06
PTPN4-204ENST00000431283 ZNF138P52744 262 aa2.19□□□□□ -2.06
PTPN4-204ENST00000431283 KRTAP12-3P60328 96 aa2.19□□□□□ -2.06
PTPN4-204ENST00000431283 HBG1P69891 147 aa2.19□□□□□ -2.06
PTPN4-204ENST00000431283 HBG2P69892 147 aa2.19□□□□□ -2.06
PTPN4-204ENST00000431283 LAGE3Q14657 143 aa2.19□□□□□ -2.06
PTPN4-204ENST00000431283 ZNF846Q147U1 533 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms