RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 GAGE12BA1L429 117 aa8.84□□□□□ -0.99
PTCH1-208ENST00000430669 GAGE7O76087 117 aa8.84□□□□□ -0.99
PTCH1-208ENST00000430669 GAGE12FP0CL80 117 aa8.84□□□□□ -0.99
PTCH1-208ENST00000430669 GAGE12GP0CL81 117 aa8.84□□□□□ -0.99
PTCH1-208ENST00000430669 GAGE12IP0CL82 117 aa8.84□□□□□ -0.99
PTCH1-208ENST00000430669 NOP10Q9NPE3 64 aaKnown RBP8.84□□□□□ -0.99
PTCH1-208ENST00000430669 SONP18583 2426 aaKnown RBP8.84□□□□□ -0.99
PTCH1-208ENST00000430669 A0A1B0GXF2 115 aa8.84□□□□□ -0.99
PTCH1-208ENST00000430669 SUMO4Q6EEV6 95 aa8.84□□□□□ -0.99
PTCH1-208ENST00000430669 GAGE12JA6NER3 117 aa8.84□□□□□ -0.99
PTCH1-208ENST00000430669 GAGE4Q13068 117 aa8.84□□□□□ -0.99
PTCH1-208ENST00000430669 GAGE5Q13069 117 aa8.84□□□□□ -0.99
PTCH1-208ENST00000430669 PRR31Q5SQ13 230 aa8.84□□□□□ -0.99
PTCH1-208ENST00000430669 Q6ZVH6 145 aa8.84□□□□□ -0.99
PTCH1-208ENST00000430669 TOMM6Q96B49 74 aa8.84□□□□□ -0.99
PTCH1-208ENST00000430669 ZMAT4Q9H898 229 aa8.84□□□□□ -0.99
PTCH1-208ENST00000430669 PKIGQ9Y2B9 76 aa8.84□□□□□ -0.99
PTCH1-208ENST00000430669 TRAV8-2A0A0B4J237 113 aa8.83□□□□□ -1
PTCH1-208ENST00000430669 JPT2Q9H910 190 aa8.83□□□□□ -1
PTCH1-208ENST00000430669 CLPSL1A2RUU4 121 aa8.83□□□□□ -1
PTCH1-208ENST00000430669 NRGNQ92686 78 aa8.83□□□□□ -1
PTCH1-208ENST00000430669 MLST8Q9BVC4 326 aa8.83□□□□□ -1
PTCH1-208ENST00000430669 NDUFA11Q86Y39 141 aa8.83□□□□□ -1
PTCH1-208ENST00000430669 TMEM263Q8WUH6 116 aaKnown RBP8.83□□□□□ -1
PTCH1-208ENST00000430669 IGHV3-16A0A0C4DH30 117 aa8.83□□□□□ -1
PTCH1-208ENST00000430669 F6UB75 175 aa8.83□□□□□ -1
PTCH1-208ENST00000430669 HERV-K104P63124 156 aa8.83□□□□□ -1
PTCH1-208ENST00000430669 A0A0J9YX75 114 aa8.83□□□□□ -1
PTCH1-208ENST00000430669 LURAP1LQ8IV03 231 aa8.83□□□□□ -1
PTCH1-208ENST00000430669 C10orf126Q8N4M7 172 aa8.83□□□□□ -1
PTCH1-208ENST00000430669 TRBV7-3A0A075B6L6 115 aa8.83□□□□□ -1
PTCH1-208ENST00000430669 MKI67P46013 3256 aaKnown RBP8.82□□□□□ -1
PTCH1-208ENST00000430669 TRAV8-4A0A0B4J246 113 aa8.82□□□□□ -1
PTCH1-208ENST00000430669 NAV2Q8IVL1 2488 aa8.82□□□□□ -1
PTCH1-208ENST00000430669 A0A1B0GV72 72 aa8.82□□□□□ -1
PTCH1-208ENST00000430669 TRAV13-2A0A0B4J235 113 aa8.82□□□□□ -1
PTCH1-208ENST00000430669 ZFAND3Q9H8U3 227 aa8.82□□□□□ -1
PTCH1-208ENST00000430669 F8W1H4 67 aa8.81□□□□□ -1
PTCH1-208ENST00000430669 J3QQQ9 107 aa8.81□□□□□ -1
PTCH1-208ENST00000430669 UNQ9165/PRO28630Q6UXU0 137 aa8.81□□□□□ -1
PTCH1-208ENST00000430669 CST9LQ9H4G1 147 aa8.81□□□□□ -1
PTCH1-208ENST00000430669 PSMB8P28062 276 aa8.81□□□□□ -1
PTCH1-208ENST00000430669 ASPHD1Q5U4P2 390 aa8.81□□□□□ -1
PTCH1-208ENST00000430669 Q8N1Y9 231 aa8.81□□□□□ -1
PTCH1-208ENST00000430669 CCDC168Q8NDH2 2452 aa8.81□□□□□ -1
PTCH1-208ENST00000430669 CFHR3Q02985 330 aa8.81□□□□□ -1
PTCH1-208ENST00000430669 UTF1Q5T230 341 aa8.8□□□□□ -1
PTCH1-208ENST00000430669 TIMM17AQ99595 171 aa8.8□□□□□ -1
PTCH1-208ENST00000430669 SNHG12Q9BXW3 62 aa8.8□□□□□ -1
PTCH1-208ENST00000430669 CHD9Q3L8U1 2897 aa8.8□□□□□ -1
PTCH1-208ENST00000430669 ZNF561-AS1K7EIQ3 104 aa8.8□□□□□ -1
PTCH1-208ENST00000430669 BVES-AS1Q5T3Y7 98 aa8.8□□□□□ -1
PTCH1-208ENST00000430669 PSMG3-AS1Q96PY0 264 aa8.8□□□□□ -1
PTCH1-208ENST00000430669 PRSS29PA6NIE9 313 aa8.8□□□□□ -1
PTCH1-208ENST00000430669 TRBV12-3P01733 135 aa8.8□□□□□ -1
PTCH1-208ENST00000430669 IGLV2-8P01709 118 aa8.79□□□□□ -1
PTCH1-208ENST00000430669 SCRT2Q9NQ03 307 aa8.79□□□□□ -1
PTCH1-208ENST00000430669 RPL39LQ96EH5 51 aaKnown RBP8.79□□□□□ -1
PTCH1-208ENST00000430669 PRO1854Q9UHT4 67 aa8.79□□□□□ -1
PTCH1-208ENST00000430669 NDUFA12Q9UI09 145 aa8.79□□□□□ -1
PTCH1-208ENST00000430669 PRAC2D3DTV9 90 aa8.79□□□□□ -1
PTCH1-208ENST00000430669 SIGMAR1Q99720 223 aa8.79□□□□□ -1
PTCH1-208ENST00000430669 DKK2Q9UBU2 259 aa8.79□□□□□ -1
PTCH1-208ENST00000430669 TRAV4A0A0B4J268 109 aa8.79□□□□□ -1
PTCH1-208ENST00000430669 APRG1Q8IVJ8 170 aa8.79□□□□□ -1
PTCH1-208ENST00000430669 C2orf82Q6UX34 121 aa8.78□□□□□ -1
PTCH1-208ENST00000430669 ZFP2Q6ZN57 461 aa8.78□□□□□ -1
PTCH1-208ENST00000430669 YPEL4Q96NS1 127 aa8.78□□□□□ -1
PTCH1-208ENST00000430669 SPANXDQ9BXN6 97 aa8.78□□□□□ -1
PTCH1-208ENST00000430669 MBD6Q96DN6 1003 aa8.78□□□□□ -1
PTCH1-208ENST00000430669 TRBV10-1A0A0K0K1A3 114 aa8.78□□□□□ -1
PTCH1-208ENST00000430669 HIGD1BQ9P298 99 aa8.78□□□□□ -1
PTCH1-208ENST00000430669 VWC2LB2RUY7 222 aa8.78□□□□□ -1
PTCH1-208ENST00000430669 SPART-AS1P0CW21 52 aa8.78□□□□□ -1
PTCH1-208ENST00000430669 ZFYVE26Q68DK2 2539 aa8.78□□□□□ -1
PTCH1-208ENST00000430669 SLC25A29Q8N8R3 303 aa8.78□□□□□ -1
PTCH1-208ENST00000430669 ZNF580Q9UK33 172 aa8.78□□□□□ -1
PTCH1-208ENST00000430669 BRI3O95415 125 aa8.78□□□□□ -1
PTCH1-208ENST00000430669 RIPPLY3P57055 190 aa8.77□□□□□ -1
PTCH1-208ENST00000430669 NPC2P61916 151 aa8.77□□□□□ -1
PTCH1-208ENST00000430669 RPL32P62910 135 aaKnown RBP8.77□□□□□ -1
PTCH1-208ENST00000430669 TLN2Q9Y4G6 2542 aa8.77□□□□□ -1.01
PTCH1-208ENST00000430669 CHD8Q9HCK8 2581 aa8.77□□□□□ -1.01
PTCH1-208ENST00000430669 A0A1W2PPM0 123 aa8.77□□□□□ -1.01
PTCH1-208ENST00000430669 GAGE6Q13070 117 aa8.77□□□□□ -1.01
PTCH1-208ENST00000430669 SPATA12Q7Z6I5 190 aa8.77□□□□□ -1.01
PTCH1-208ENST00000430669 GATD1Q8NB37 220 aa8.77□□□□□ -1.01
PTCH1-208ENST00000430669 Q71RC1 249 aaPredicted RBP8.77□□□□□ -1.01
PTCH1-208ENST00000430669 ADAMTSL5Q6ZMM2 481 aa8.77□□□□□ -1.01
PTCH1-208ENST00000430669 MAP6D1Q9H9H5 199 aa8.77□□□□□ -1.01
PTCH1-208ENST00000430669 IFITM1P13164 125 aa8.76□□□□□ -1.01
PTCH1-208ENST00000430669 MRPL23Q16540 153 aaKnown RBP8.76□□□□□ -1.01
PTCH1-208ENST00000430669 BAALCQ8WXS3 180 aa8.76□□□□□ -1.01
PTCH1-208ENST00000430669 INAFM2P0DMQ5 153 aa8.76□□□□□ -1.01
PTCH1-208ENST00000430669 U3KQK5 164 aa8.76□□□□□ -1.01
PTCH1-208ENST00000430669 SMIM9A6NGZ8 99 aa8.76□□□□□ -1.01
PTCH1-208ENST00000430669 CITED2Q99967 270 aaPredicted RBP8.76□□□□□ -1.01
PTCH1-208ENST00000430669 DEFB104AQ8WTQ1 72 aa8.76□□□□□ -1.01
PTCH1-208ENST00000430669 H7C423 109 aa8.76□□□□□ -1.01
PTCH1-208ENST00000430669 ZNF124Q15973 351 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms