RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738		A0A0D9SG52	128 aa		11.84	□□□□□ -0.51
MRPL28-203	ENST00000429738	IGHV3-30	P01768	117 aa		11.84	□□□□□ -0.51
MRPL28-203	ENST00000429738	IGHV3-33	P01772	117 aa		11.84	□□□□□ -0.51
MRPL28-203	ENST00000429738	IGHV3-30-3	P0DP02	117 aa		11.84	□□□□□ -0.51
MRPL28-203	ENST00000429738	IGHV3-30-5	P0DP03	117 aa		11.84	□□□□□ -0.51
MRPL28-203	ENST00000429738	AKR1C3	P42330	323 aa		11.84	□□□□□ -0.51
MRPL28-203	ENST00000429738	LAGE3	Q14657	143 aa		11.84	□□□□□ -0.51
MRPL28-203	ENST00000429738	SFT2D1	Q8WV19	159 aa		11.84	□□□□□ -0.51
MRPL28-203	ENST00000429738	SFRP2	Q96HF1	295 aa		11.84	□□□□□ -0.51
MRPL28-203	ENST00000429738	FAM229A	H3BQW9	127 aa		11.83	□□□□□ -0.52
MRPL28-203	ENST00000429738	BCL2L11	O43521	198 aa		11.83	□□□□□ -0.52
MRPL28-203	ENST00000429738		Q6ZNX1	250 aa		11.83	□□□□□ -0.52
MRPL28-203	ENST00000429738		Q8N3U1	123 aa		11.83	□□□□□ -0.52
MRPL28-203	ENST00000429738	FAM213B	Q8TBF2	198 aa		11.83	□□□□□ -0.52
MRPL28-203	ENST00000429738	PHLDA3	Q9Y5J5	127 aa		11.83	□□□□□ -0.52
MRPL28-203	ENST00000429738	PSCA	O43653	123 aa		11.82	□□□□□ -0.52
MRPL28-203	ENST00000429738	TPT1	P13693	172 aa	Known RBP	11.82	□□□□□ -0.52
MRPL28-203	ENST00000429738	GCSH	P23434	173 aa		11.82	□□□□□ -0.52
MRPL28-203	ENST00000429738	MLST8	Q9BVC4	326 aa		11.82	□□□□□ -0.52
MRPL28-203	ENST00000429738	ZNF471	Q9BX82	626 aa	Predicted RBP	11.82	□□□□□ -0.52
MRPL28-203	ENST00000429738		Q9HAA7	133 aa		11.82	□□□□□ -0.52
MRPL28-203	ENST00000429738	TMSB15B	A0A087X1C1	80 aa		11.81	□□□□□ -0.52
MRPL28-203	ENST00000429738	KANTR	A0A1W2PQU2	76 aa		11.81	□□□□□ -0.52
MRPL28-203	ENST00000429738	S100A9	P06702	114 aa	Known RBP	11.81	□□□□□ -0.52
MRPL28-203	ENST00000429738	FAM74A4	Q5TZK3	123 aa		11.81	□□□□□ -0.52
MRPL28-203	ENST00000429738	NTN5	Q8WTR8	489 aa	Predicted RBP	11.81	□□□□□ -0.52
MRPL28-203	ENST00000429738		A0A087WWC5	75 aa		11.8	□□□□□ -0.52
MRPL28-203	ENST00000429738		A0A087WWL8	130 aa		11.8	□□□□□ -0.52
MRPL28-203	ENST00000429738	SCO2	A0A1W2PP80	73 aa		11.8	□□□□□ -0.52
MRPL28-203	ENST00000429738		M0R381	172 aa		11.8	□□□□□ -0.52
MRPL28-203	ENST00000429738	ZFP82	Q8N141	532 aa		11.8	□□□□□ -0.52
MRPL28-203	ENST00000429738		Q8N814	137 aa		11.8	□□□□□ -0.52
MRPL28-203	ENST00000429738	DNAH8	Q96JB1	4490 aa		11.8	□□□□□ -0.52
MRPL28-203	ENST00000429738		A0A1B0GV50	99 aa		11.79	□□□□□ -0.52
MRPL28-203	ENST00000429738	CXCL1	P09341	107 aa		11.79	□□□□□ -0.52
MRPL28-203	ENST00000429738	H2AFB1	P0C5Y9	115 aa		11.79	□□□□□ -0.52
MRPL28-203	ENST00000429738		J3QL48	77 aa		11.78	□□□□□ -0.52
MRPL28-203	ENST00000429738	PFDN1	O60925	122 aa		11.78	□□□□□ -0.52
MRPL28-203	ENST00000429738	EIF5A	P63241	154 aa	Known RBP	11.78	□□□□□ -0.52
MRPL28-203	ENST00000429738	IGLV5-52	A0A0A0MRZ9	124 aa		11.77	□□□□□ -0.53
MRPL28-203	ENST00000429738	TRBV10-1	A0A0K0K1A3	114 aa		11.77	□□□□□ -0.53
MRPL28-203	ENST00000429738	RPL19	P84098	196 aa	Known RBP	11.77	□□□□□ -0.53
MRPL28-203	ENST00000429738	TMUB2	Q71RG4	321 aa		11.77	□□□□□ -0.53
MRPL28-203	ENST00000429738	DAZ4	Q86SG3	579 aa	Known RBP	11.77	□□□□□ -0.53
MRPL28-203	ENST00000429738	BAGE2	Q86Y30	109 aa		11.77	□□□□□ -0.53
MRPL28-203	ENST00000429738	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.77	□□□□□ -0.53
MRPL28-203	ENST00000429738	TM2D2	Q9BX73	214 aa		11.77	□□□□□ -0.53
MRPL28-203	ENST00000429738	DAZ3	Q9NR90	486 aa	Known RBP	11.77	□□□□□ -0.53
MRPL28-203	ENST00000429738	hCG_2014768	A0A024R1R8	64 aa		11.76	□□□□□ -0.53
MRPL28-203	ENST00000429738	TRAV8-3	A0A0A6YYJ7	113 aa		11.76	□□□□□ -0.53
MRPL28-203	ENST00000429738	SNAI2	O43623	268 aa		11.76	□□□□□ -0.53
MRPL28-203	ENST00000429738	NIT1	Q86X76	327 aa		11.76	□□□□□ -0.53
MRPL28-203	ENST00000429738	UBE2D3	P61077	147 aa		11.75	□□□□□ -0.53
MRPL28-203	ENST00000429738	UBE2D2	P62837	147 aa		11.75	□□□□□ -0.53
MRPL28-203	ENST00000429738	HAMP	P81172	84 aa		11.75	□□□□□ -0.53
MRPL28-203	ENST00000429738	WFDC2	Q14508	124 aa		11.75	□□□□□ -0.53
MRPL28-203	ENST00000429738	TOR2A	Q5JU69	321 aa		11.75	□□□□□ -0.53
MRPL28-203	ENST00000429738	OR10G8	Q8NGN5	311 aa		11.75	□□□□□ -0.53
MRPL28-203	ENST00000429738	OR10AG1	Q8NH19	301 aa		11.75	□□□□□ -0.53
MRPL28-203	ENST00000429738	TMEM70	Q9BUB7	260 aa		11.75	□□□□□ -0.53
MRPL28-203	ENST00000429738	TRBV7-3	A0A075B6L6	115 aa		11.74	□□□□□ -0.53
MRPL28-203	ENST00000429738	TRAV1-1	A0A0B4J248	108 aa		11.74	□□□□□ -0.53
MRPL28-203	ENST00000429738		A0A1B0GVG6	124 aa		11.74	□□□□□ -0.53
MRPL28-203	ENST00000429738	OR5AL1	P0C617	328 aa		11.74	□□□□□ -0.53
MRPL28-203	ENST00000429738	C11orf52	Q96A22	123 aa		11.74	□□□□□ -0.53
MRPL28-203	ENST00000429738	RPL35	P42766	123 aa	Known RBP	11.73	□□□□□ -0.53
MRPL28-203	ENST00000429738	RAB4B	P61018	213 aa		11.73	□□□□□ -0.53
MRPL28-203	ENST00000429738	CCL20	P78556	96 aa		11.73	□□□□□ -0.53
MRPL28-203	ENST00000429738	RPL36A	P83881	106 aa	Known RBP	11.73	□□□□□ -0.53
MRPL28-203	ENST00000429738	PRR27	Q6MZM9	219 aa		11.73	□□□□□ -0.53
MRPL28-203	ENST00000429738	RPL36AL	Q969Q0	106 aa	Known RBP	11.73	□□□□□ -0.53
MRPL28-203	ENST00000429738	MANBAL	Q9NQG1	85 aa		11.73	□□□□□ -0.53
MRPL28-203	ENST00000429738	RAB5C	P51148	216 aa		11.72	□□□□□ -0.53
MRPL28-203	ENST00000429738	CHCHD7	Q9BUK0	85 aa		11.72	□□□□□ -0.53
MRPL28-203	ENST00000429738	DERL1	Q9BUN8	251 aa		11.72	□□□□□ -0.53
MRPL28-203	ENST00000429738	GNG13	Q9P2W3	67 aa		11.71	□□□□□ -0.53
MRPL28-203	ENST00000429738	COX11	Q9Y6N1	276 aa		11.71	□□□□□ -0.53
MRPL28-203	ENST00000429738	URGCP-MRPS24	S4R325	110 aa		11.71	□□□□□ -0.53
MRPL28-203	ENST00000429738	C1QB	P02746	253 aa		11.7	□□□□□ -0.54
MRPL28-203	ENST00000429738	NEXN-AS1	Q8NBZ9	246 aa		11.7	□□□□□ -0.54
MRPL28-203	ENST00000429738	DNAJC30	Q96LL9	226 aa		11.7	□□□□□ -0.54
MRPL28-203	ENST00000429738	KIF25-AS1	Q9Y6Z4	181 aa		11.7	□□□□□ -0.54
MRPL28-203	ENST00000429738	IGLV2-8	P01709	118 aa		11.69	□□□□□ -0.54
MRPL28-203	ENST00000429738	SULT1A2	P50226	295 aa		11.69	□□□□□ -0.54
MRPL28-203	ENST00000429738	ZNF56	Q15929	161 aa		11.69	□□□□□ -0.54
MRPL28-203	ENST00000429738	SPANXN1	Q5VSR9	72 aa		11.69	□□□□□ -0.54
MRPL28-203	ENST00000429738	EIF5AL1	Q6IS14	154 aa	Known RBP	11.69	□□□□□ -0.54
MRPL28-203	ENST00000429738	FAM30A	Q9NZY2	134 aa		11.69	□□□□□ -0.54
MRPL28-203	ENST00000429738	KLK12	Q9UKR0	248 aa		11.69	□□□□□ -0.54
MRPL28-203	ENST00000429738	MUC21	A0A0G2JKD1	596 aa		11.68	□□□□□ -0.54
MRPL28-203	ENST00000429738	MUC21	A0A140T8X8	626 aa		11.68	□□□□□ -0.54
MRPL28-203	ENST00000429738	ATRAID	Q6UW56	229 aa		11.68	□□□□□ -0.54
MRPL28-203	ENST00000429738	TCTE3	Q8IZS6	198 aa		11.68	□□□□□ -0.54
MRPL28-203	ENST00000429738	RMI2	Q96E14	147 aa		11.68	□□□□□ -0.54
MRPL28-203	ENST00000429738		A0A087WX48	190 aa		11.67	□□□□□ -0.54
MRPL28-203	ENST00000429738	TRBV6-8	A0A0A6YYG3	113 aa		11.67	□□□□□ -0.54
MRPL28-203	ENST00000429738	KRTAP29-1	A8MX34	341 aa	Predicted RBP	11.67	□□□□□ -0.54
MRPL28-203	ENST00000429738	LECT2	O14960	151 aa		11.67	□□□□□ -0.54
MRPL28-203	ENST00000429738	ELOB	Q15370	118 aa		11.67	□□□□□ -0.54
MRPL28-203	ENST00000429738	CENPW	Q5EE01	88 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms