RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 LINC00476Q8WZB0 136 aa10.42□□□□□ -0.74
GARNL3-204ENST00000429629 SEC11CQ9BY50 192 aa10.42□□□□□ -0.74
GARNL3-204ENST00000429629 PPP1R2P9O14990 202 aa10.41□□□□□ -0.74
GARNL3-204ENST00000429629 NTF3P20783 257 aa10.41□□□□□ -0.74
GARNL3-204ENST00000429629 SLC25A29Q8N8R3 303 aa10.41□□□□□ -0.74
GARNL3-204ENST00000429629 PRADC1Q9BSG0 188 aa10.41□□□□□ -0.74
GARNL3-204ENST00000429629 SAMD10Q9BYL1 202 aa10.41□□□□□ -0.74
GARNL3-204ENST00000429629 JPT2Q9H910 190 aa10.41□□□□□ -0.74
GARNL3-204ENST00000429629 ICOSQ9Y6W8 199 aa10.41□□□□□ -0.74
GARNL3-204ENST00000429629 MUC4Q99102 2169 aa10.41□□□□□ -0.74
GARNL3-204ENST00000429629 A0A096LPF7 62 aa10.4□□□□□ -0.74
GARNL3-204ENST00000429629 A0A0J9YY99 117 aa10.4□□□□□ -0.74
GARNL3-204ENST00000429629 TRGC1P0CF51 173 aa10.4□□□□□ -0.74
GARNL3-204ENST00000429629 RAB4BP61018 213 aa10.4□□□□□ -0.74
GARNL3-204ENST00000429629 RHOHQ15669 191 aa10.4□□□□□ -0.74
GARNL3-204ENST00000429629 AP1S3Q96PC3 154 aa10.4□□□□□ -0.74
GARNL3-204ENST00000429629 TPPP3Q9BW30 176 aa10.4□□□□□ -0.74
GARNL3-204ENST00000429629 KIF25-AS1Q9Y6Z4 181 aa10.4□□□□□ -0.74
GARNL3-204ENST00000429629 TRBV10-1A0A0K0K1A3 114 aa10.39□□□□□ -0.75
GARNL3-204ENST00000429629 NUDT3O95989 172 aa10.39□□□□□ -0.75
GARNL3-204ENST00000429629 C10orf91Q5T1B1 145 aa10.39□□□□□ -0.75
GARNL3-204ENST00000429629 KMT2CQ8NEZ4 4911 aaKnown RBP10.38□□□□□ -0.75
GARNL3-204ENST00000429629 SMIM27A0A1W2PRY6 76 aa10.38□□□□□ -0.75
GARNL3-204ENST00000429629 HIGD1CA8MV81 97 aa10.38□□□□□ -0.75
GARNL3-204ENST00000429629 F8W036 122 aa10.38□□□□□ -0.75
GARNL3-204ENST00000429629 K7EQD1 137 aa10.38□□□□□ -0.75
GARNL3-204ENST00000429629 MT-ND4LP03901 98 aa10.38□□□□□ -0.75
GARNL3-204ENST00000429629 SMIM17P0DL12 118 aa10.38□□□□□ -0.75
GARNL3-204ENST00000429629 CCL18P55774 89 aa10.38□□□□□ -0.75
GARNL3-204ENST00000429629 TIRAPP58753 221 aa10.38□□□□□ -0.75
GARNL3-204ENST00000429629 LINC00315P59091 139 aa10.38□□□□□ -0.75
GARNL3-204ENST00000429629 NEGR1Q7Z3B1 354 aa10.38□□□□□ -0.75
GARNL3-204ENST00000429629 ANAPC16Q96DE5 110 aa10.38□□□□□ -0.75
GARNL3-204ENST00000429629 NAT8BQ9UHF3 227 aa10.38□□□□□ -0.75
GARNL3-204ENST00000429629 DNAH1Q9P2D7 4330 aa10.37□□□□□ -0.75
GARNL3-204ENST00000429629 A0A087WWL8 130 aa10.37□□□□□ -0.75
GARNL3-204ENST00000429629 A0A1B0GUT8 65 aa10.37□□□□□ -0.75
GARNL3-204ENST00000429629 GYPEP15421 78 aa10.37□□□□□ -0.75
GARNL3-204ENST00000429629 TWIST1Q15672 202 aa10.37□□□□□ -0.75
GARNL3-204ENST00000429629 Q6ZSN1 163 aa10.37□□□□□ -0.75
GARNL3-204ENST00000429629 C14orf178Q8N769 122 aaPredicted RBP10.37□□□□□ -0.75
GARNL3-204ENST00000429629 FRZBQ92765 325 aa10.37□□□□□ -0.75
GARNL3-204ENST00000429629 BORCS7Q96B45 105 aa10.37□□□□□ -0.75
GARNL3-204ENST00000429629 MSRB1Q9NZV6 116 aa10.37□□□□□ -0.75
GARNL3-204ENST00000429629 IGHV3-73A0A0B4J1V6 119 aa10.36□□□□□ -0.75
GARNL3-204ENST00000429629 MUC21A0A0G2JKD1 596 aa10.36□□□□□ -0.75
GARNL3-204ENST00000429629 MUC21A0A140T8X8 626 aa10.36□□□□□ -0.75
GARNL3-204ENST00000429629 SRIP30626 198 aa10.36□□□□□ -0.75
GARNL3-204ENST00000429629 FAM74A4Q5TZK3 123 aa10.36□□□□□ -0.75
GARNL3-204ENST00000429629 SMIM15Q7Z3B0 74 aa10.36□□□□□ -0.75
GARNL3-204ENST00000429629 NUP35Q8NFH5 326 aa10.36□□□□□ -0.75
GARNL3-204ENST00000429629 PGLYRP4Q96LB8 373 aa10.36□□□□□ -0.75
GARNL3-204ENST00000429629 SACSQ9NZJ4 4579 aa10.36□□□□□ -0.75
GARNL3-204ENST00000429629 VPS13DQ5THJ4 4388 aa10.35□□□□□ -0.75
GARNL3-204ENST00000429629 A0A1B0GW15 77 aa10.35□□□□□ -0.75
GARNL3-204ENST00000429629 LY6G6CO95867 125 aa10.35□□□□□ -0.75
GARNL3-204ENST00000429629 ADCYAP1P18509 176 aa10.35□□□□□ -0.75
GARNL3-204ENST00000429629 UPK3BQ9BT76 320 aa10.35□□□□□ -0.75
GARNL3-204ENST00000429629 DPH3P1Q9H4G8 78 aa10.35□□□□□ -0.75
GARNL3-204ENST00000429629 CARHSP1Q9Y2V2 147 aaKnown RBP10.35□□□□□ -0.75
GARNL3-204ENST00000429629 EVI2AP22794 236 aa10.34□□□□□ -0.75
GARNL3-204ENST00000429629 RIGQ13278 110 aa10.34□□□□□ -0.75
GARNL3-204ENST00000429629 ESRGQ1W209 222 aa10.34□□□□□ -0.75
GARNL3-204ENST00000429629 LYPD5Q6UWN5 251 aa10.34□□□□□ -0.75
GARNL3-204ENST00000429629 IMMP2LQ96T52 175 aa10.34□□□□□ -0.75
GARNL3-204ENST00000429629 CTDSP1Q9GZU7 261 aa10.34□□□□□ -0.75
GARNL3-204ENST00000429629 H7C1H1 209 aa10.33□□□□□ -0.76
GARNL3-204ENST00000429629 LINC00694P0DN24 101 aa10.33□□□□□ -0.76
GARNL3-204ENST00000429629 SSTP61278 116 aa10.33□□□□□ -0.76
GARNL3-204ENST00000429629 TMEM191AQ9H0A3 160 aa10.33□□□□□ -0.76
GARNL3-204ENST00000429629 TMEM242Q9NWH2 141 aa10.33□□□□□ -0.76
GARNL3-204ENST00000429629 MRPS16Q9Y3D3 137 aaKnown RBP10.33□□□□□ -0.76
GARNL3-204ENST00000429629 LINC00588Q9Y4M8 146 aa10.33□□□□□ -0.76
GARNL3-204ENST00000429629 ALMS1Q8TCU4 4167 aa10.32□□□□□ -0.76
GARNL3-204ENST00000429629 DNAJC30Q96LL9 226 aa10.32□□□□□ -0.76
GARNL3-204ENST00000429629 LYSTQ99698 3801 aa10.31□□□□□ -0.76
GARNL3-204ENST00000429629 TRBV7-3A0A075B6L6 115 aa10.31□□□□□ -0.76
GARNL3-204ENST00000429629 LOC100131303A0A0U1RQF7 123 aa10.31□□□□□ -0.76
GARNL3-204ENST00000429629 F5H697 171 aa10.31□□□□□ -0.76
GARNL3-204ENST00000429629 M0QY20 66 aa10.31□□□□□ -0.76
GARNL3-204ENST00000429629 S100A8P05109 93 aa10.31□□□□□ -0.76
GARNL3-204ENST00000429629 RPL36AP83881 106 aaKnown RBP10.31□□□□□ -0.76
GARNL3-204ENST00000429629 ZNF56Q15929 161 aa10.31□□□□□ -0.76
GARNL3-204ENST00000429629 ATP5L2Q7Z4Y8 100 aa10.31□□□□□ -0.76
GARNL3-204ENST00000429629 UBE2DNLQ8IWF7 75 aa10.31□□□□□ -0.76
GARNL3-204ENST00000429629 ATP6V0E2Q8NHE4 81 aa10.31□□□□□ -0.76
GARNL3-204ENST00000429629 RPL36ALQ969Q0 106 aaKnown RBP10.31□□□□□ -0.76
GARNL3-204ENST00000429629 A0A087WWC5 75 aa10.3□□□□□ -0.76
GARNL3-204ENST00000429629 ZNRF2Q8NHG8 242 aa10.3□□□□□ -0.76
GARNL3-204ENST00000429629 GTSF1LQ9H1H1 148 aa10.3□□□□□ -0.76
GARNL3-204ENST00000429629 K7EP13 123 aa10.29□□□□□ -0.76
GARNL3-204ENST00000429629 UBE2D3P61077 147 aa10.29□□□□□ -0.76
GARNL3-204ENST00000429629 UBE2D2P62837 147 aa10.29□□□□□ -0.76
GARNL3-204ENST00000429629 RHEBQ15382 184 aa10.29□□□□□ -0.76
GARNL3-204ENST00000429629 NDUFA5Q16718 116 aa10.29□□□□□ -0.76
GARNL3-204ENST00000429629 Q9UF83 564 aa10.29□□□□□ -0.76
GARNL3-204ENST00000429629 GAGE12JA6NER3 117 aa10.28□□□□□ -0.76
GARNL3-204ENST00000429629 GAGE1Q13065 139 aa10.28□□□□□ -0.76
GARNL3-204ENST00000429629 GAGE4Q13068 117 aa10.28□□□□□ -0.76
GARNL3-204ENST00000429629 GAGE5Q13069 117 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms