RNA–Protein interactions for RNA: ENST00000428966.1

PABPC1P11-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 11, humanhuman

BASIC

Gene PABPC1P11, Length 2,007 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11-201ENST00000428966 OR11H12B2RN74 326 aa8.6□□□□□ -1.03
PABPC1P11-201ENST00000428966 IGLC6P0CF74 106 aa8.6□□□□□ -1.03
PABPC1P11-201ENST00000428966 MUC21Q5SSG8 566 aa8.6□□□□□ -1.03
PABPC1P11-201ENST00000428966 Q6ZVH6 145 aa8.6□□□□□ -1.03
PABPC1P11-201ENST00000428966 SBSPONQ8IVN8 264 aa8.6□□□□□ -1.03
PABPC1P11-201ENST00000428966 A0A096LNJ9 63 aa8.59□□□□□ -1.03
PABPC1P11-201ENST00000428966 ODF3L2Q3SX64 289 aa8.59□□□□□ -1.03
PABPC1P11-201ENST00000428966 SIVA1O15304 175 aa8.59□□□□□ -1.03
PABPC1P11-201ENST00000428966 BUB3O43684 328 aa8.59□□□□□ -1.03
PABPC1P11-201ENST00000428966 NCR2O95944 276 aa8.59□□□□□ -1.03
PABPC1P11-201ENST00000428966 SLC50A1Q9BRV3 221 aa8.59□□□□□ -1.03
PABPC1P11-201ENST00000428966 CNFNQ9BYD5 112 aa8.59□□□□□ -1.03
PABPC1P11-201ENST00000428966 NBEAL2Q6ZNJ1 2754 aa8.59□□□□□ -1.03
PABPC1P11-201ENST00000428966 RPL11P62913 178 aaKnown RBP8.58□□□□□ -1.04
PABPC1P11-201ENST00000428966 GLMPQ8WWB7 406 aa8.58□□□□□ -1.04
PABPC1P11-201ENST00000428966 IFI27L1Q96BM0 104 aa8.58□□□□□ -1.04
PABPC1P11-201ENST00000428966 VGLL1Q99990 258 aa8.58□□□□□ -1.04
PABPC1P11-201ENST00000428966 MAP1LC3AQ9H492 121 aa8.58□□□□□ -1.04
PABPC1P11-201ENST00000428966 LINC01546A6NGU7 62 aa8.58□□□□□ -1.04
PABPC1P11-201ENST00000428966 ORM1P02763 201 aa8.58□□□□□ -1.04
PABPC1P11-201ENST00000428966 TMEM97Q5BJF2 176 aa8.58□□□□□ -1.04
PABPC1P11-201ENST00000428966 C2orf91Q6ZV80 131 aa8.58□□□□□ -1.04
PABPC1P11-201ENST00000428966 NXT2Q9NPJ8 142 aaKnown RBP8.58□□□□□ -1.04
PABPC1P11-201ENST00000428966 TP73-AS1Q9UF72 201 aa8.58□□□□□ -1.04
PABPC1P11-201ENST00000428966 STAB2Q8WWQ8 2551 aa8.57□□□□□ -1.04
PABPC1P11-201ENST00000428966 TENM3Q9P273 2699 aa8.57□□□□□ -1.04
PABPC1P11-201ENST00000428966 RBMY1BA6NDE4 496 aaKnown RBP8.57□□□□□ -1.04
PABPC1P11-201ENST00000428966 A6NDN8 102 aa8.57□□□□□ -1.04
PABPC1P11-201ENST00000428966 RBMY1EA6NEQ0 496 aaKnown RBP8.57□□□□□ -1.04
PABPC1P11-201ENST00000428966 RBMY1DP0C7P1 496 aaKnown RBP8.57□□□□□ -1.04
PABPC1P11-201ENST00000428966 ZNF80P51504 273 aaPredicted RBP8.57□□□□□ -1.04
PABPC1P11-201ENST00000428966 CACNG7P62955 275 aa8.57□□□□□ -1.04
PABPC1P11-201ENST00000428966 WFDC3Q8IUB2 231 aa8.57□□□□□ -1.04
PABPC1P11-201ENST00000428966 BOD1L2Q8IYS8 172 aa8.57□□□□□ -1.04
PABPC1P11-201ENST00000428966 CBY3A6NI87 242 aa8.56□□□□□ -1.04
PABPC1P11-201ENST00000428966 NPYP01303 97 aa8.56□□□□□ -1.04
PABPC1P11-201ENST00000428966 PRB4P10163 310 aaPredicted RBP8.56□□□□□ -1.04
PABPC1P11-201ENST00000428966 Q8TAT8 98 aa8.56□□□□□ -1.04
PABPC1P11-201ENST00000428966 DCANP1Q8TF63 244 aa8.56□□□□□ -1.04
PABPC1P11-201ENST00000428966 FGF6P10767 208 aa8.56□□□□□ -1.04
PABPC1P11-201ENST00000428966 APRG1Q8IVJ8 170 aa8.56□□□□□ -1.04
PABPC1P11-201ENST00000428966 MRPL53Q96EL3 112 aaKnown RBP8.56□□□□□ -1.04
PABPC1P11-201ENST00000428966 FAM110AQ9BQ89 295 aa8.56□□□□□ -1.04
PABPC1P11-201ENST00000428966 CDKN1BP46527 198 aa8.55□□□□□ -1.04
PABPC1P11-201ENST00000428966 HSD52Q0P140 79 aa8.55□□□□□ -1.04
PABPC1P11-201ENST00000428966 ANKRD39Q53RE8 183 aa8.55□□□□□ -1.04
PABPC1P11-201ENST00000428966 SMIM15Q7Z3B0 74 aa8.55□□□□□ -1.04
PABPC1P11-201ENST00000428966 RNASE8Q8TDE3 154 aaKnown RBP8.55□□□□□ -1.04
PABPC1P11-201ENST00000428966 RNF185Q96GF1 192 aa8.55□□□□□ -1.04
PABPC1P11-201ENST00000428966 MAP6D1Q9H9H5 199 aa8.55□□□□□ -1.04
PABPC1P11-201ENST00000428966 C7orf71A4D174 169 aa8.54□□□□□ -1.04
PABPC1P11-201ENST00000428966 SMKR1H3BMG3 65 aa8.54□□□□□ -1.04
PABPC1P11-201ENST00000428966 K7EQG2 157 aa8.54□□□□□ -1.04
PABPC1P11-201ENST00000428966 NHLRC4P0CG21 123 aaPredicted RBP8.54□□□□□ -1.04
PABPC1P11-201ENST00000428966 FCER1GP30273 86 aa8.54□□□□□ -1.04
PABPC1P11-201ENST00000428966 AMMECR1LQ6DCA0 310 aa8.54□□□□□ -1.04
PABPC1P11-201ENST00000428966 AP1S3Q96PC3 154 aa8.54□□□□□ -1.04
PABPC1P11-201ENST00000428966 TRAV2A0A0B4J234 112 aa8.54□□□□□ -1.04
PABPC1P11-201ENST00000428966 H3BRM9 83 aa8.54□□□□□ -1.04
PABPC1P11-201ENST00000428966 HLA-DMBP28068 263 aa8.54□□□□□ -1.04
PABPC1P11-201ENST00000428966 RBX1P62877 108 aa8.54□□□□□ -1.04
PABPC1P11-201ENST00000428966 IGFL4Q6B9Z1 124 aa8.54□□□□□ -1.04
PABPC1P11-201ENST00000428966 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.54□□□□□ -1.04
PABPC1P11-201ENST00000428966 TM2D3Q9BRN9 247 aa8.54□□□□□ -1.04
PABPC1P11-201ENST00000428966 TNFRSF6BO95407 300 aa8.53□□□□□ -1.04
PABPC1P11-201ENST00000428966 ERCC8Q13216 396 aa8.53□□□□□ -1.04
PABPC1P11-201ENST00000428966 TMEM78Q5T7P6 136 aa8.53□□□□□ -1.04
PABPC1P11-201ENST00000428966 SNAI2O43623 268 aa8.53□□□□□ -1.04
PABPC1P11-201ENST00000428966 ZNF688P0C7X2 276 aa8.53□□□□□ -1.04
PABPC1P11-201ENST00000428966 DEFB131AP59861 70 aa8.53□□□□□ -1.04
PABPC1P11-201ENST00000428966 GTF2H5Q6ZYL4 71 aa8.53□□□□□ -1.04
PABPC1P11-201ENST00000428966 ZNF575Q86XF7 245 aa8.53□□□□□ -1.04
PABPC1P11-201ENST00000428966 ATP5LO75964 103 aa8.52□□□□□ -1.05
PABPC1P11-201ENST00000428966 LEPP41159 167 aa8.52□□□□□ -1.05
PABPC1P11-201ENST00000428966 PCP4P48539 62 aa8.52□□□□□ -1.05
PABPC1P11-201ENST00000428966 Q8N8P6 123 aa8.52□□□□□ -1.05
PABPC1P11-201ENST00000428966 C9orf118A6NHY6 69 aa8.51□□□□□ -1.05
PABPC1P11-201ENST00000428966 PRAC2D3DTV9 90 aa8.51□□□□□ -1.05
PABPC1P11-201ENST00000428966 FXYD7P58549 80 aa8.51□□□□□ -1.05
PABPC1P11-201ENST00000428966 MSRB1Q9NZV6 116 aa8.51□□□□□ -1.05
PABPC1P11-201ENST00000428966 GAGE10A6NGK3 116 aa8.51□□□□□ -1.05
PABPC1P11-201ENST00000428966 PRSS47A8MTI9 375 aa8.51□□□□□ -1.05
PABPC1P11-201ENST00000428966 C9orf47Q6ZRZ4 202 aa8.51□□□□□ -1.05
PABPC1P11-201ENST00000428966 ERASQ7Z444 233 aa8.51□□□□□ -1.05
PABPC1P11-201ENST00000428966 RNF182Q8N6D2 247 aa8.51□□□□□ -1.05
PABPC1P11-201ENST00000428966 AGPAT4-IT1Q9H0P7 198 aa8.51□□□□□ -1.05
PABPC1P11-201ENST00000428966 CST9LQ9H4G1 147 aa8.51□□□□□ -1.05
PABPC1P11-201ENST00000428966 ZMAT4Q9H898 229 aa8.51□□□□□ -1.05
PABPC1P11-201ENST00000428966 RETNQ9HD89 108 aa8.51□□□□□ -1.05
PABPC1P11-201ENST00000428966 TRAV8-6A0A0B4J262 113 aa8.5□□□□□ -1.05
PABPC1P11-201ENST00000428966 SOCS3O14543 225 aa8.5□□□□□ -1.05
PABPC1P11-201ENST00000428966 RPL35AP18077 110 aaKnown RBP8.5□□□□□ -1.05
PABPC1P11-201ENST00000428966 NMUP48645 174 aa8.5□□□□□ -1.05
PABPC1P11-201ENST00000428966 CMC4P56277 68 aaPredicted RBP8.5□□□□□ -1.05
PABPC1P11-201ENST00000428966 DKK2Q9UBU2 259 aa8.5□□□□□ -1.05
PABPC1P11-201ENST00000428966 LENEPQ9Y5L5 61 aa8.5□□□□□ -1.05
PABPC1P11-201ENST00000428966 IGHV4-4A0A075B6R2 117 aa8.49□□□□□ -1.05
PABPC1P11-201ENST00000428966 IGKV3D-20A0A0C4DH25 116 aa8.49□□□□□ -1.05
PABPC1P11-201ENST00000428966 PRSS1P07477 247 aa8.49□□□□□ -1.05
PABPC1P11-201ENST00000428966 OCIAD2Q56VL3 154 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms