RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 PPBPP02775 128 aa6.35□□□□□ -1.39
HDAC1-202ENST00000428704 NTF3P20783 257 aa6.35□□□□□ -1.39
HDAC1-202ENST00000428704 ID1P41134 155 aa6.35□□□□□ -1.39
HDAC1-202ENST00000428704 LGALS9CQ6DKI2 356 aa6.35□□□□□ -1.39
HDAC1-202ENST00000428704 GTSCR1Q86UQ5 136 aa6.35□□□□□ -1.39
HDAC1-202ENST00000428704 ZFAND2AQ8N6M9 145 aa6.35□□□□□ -1.39
HDAC1-202ENST00000428704 Q8N976 141 aa6.35□□□□□ -1.39
HDAC1-202ENST00000428704 ZNF738Q8NE65 137 aa6.35□□□□□ -1.39
HDAC1-202ENST00000428704 OR10J6PQ8NGY7 276 aa6.35□□□□□ -1.39
HDAC1-202ENST00000428704 DCANP1Q8TF63 244 aa6.35□□□□□ -1.39
HDAC1-202ENST00000428704 C20orf144Q9BQM9 153 aa6.35□□□□□ -1.39
HDAC1-202ENST00000428704 LAMTOR2Q9Y2Q5 125 aa6.35□□□□□ -1.39
HDAC1-202ENST00000428704 KLK5Q9Y337 293 aaPredicted RBP6.35□□□□□ -1.39
HDAC1-202ENST00000428704 TRAV21A0A0B4J279 112 aa6.34□□□□□ -1.39
HDAC1-202ENST00000428704 KIR2DL5BA0A0G2JN68 375 aa6.34□□□□□ -1.39
HDAC1-202ENST00000428704 KIR2DL5BA0A0G2JPC4 375 aa6.34□□□□□ -1.39
HDAC1-202ENST00000428704 PRSS47A8MTI9 375 aa6.34□□□□□ -1.39
HDAC1-202ENST00000428704 C3orf79P0CE67 100 aa6.34□□□□□ -1.39
HDAC1-202ENST00000428704 DDTP30046 118 aa6.34□□□□□ -1.39
HDAC1-202ENST00000428704 CACNG7P62955 275 aa6.34□□□□□ -1.39
HDAC1-202ENST00000428704 PMCHL1Q16048 86 aa6.34□□□□□ -1.39
HDAC1-202ENST00000428704 CEMP1Q6PRD7 247 aaPredicted RBP6.34□□□□□ -1.39
HDAC1-202ENST00000428704 LINC00336Q6ZUF6 198 aa6.34□□□□□ -1.39
HDAC1-202ENST00000428704 KIR2DL5AQ8N109 375 aa6.34□□□□□ -1.39
HDAC1-202ENST00000428704 FAM19A2Q8N3H0 131 aa6.34□□□□□ -1.39
HDAC1-202ENST00000428704 DEFB125Q8N687 156 aa6.34□□□□□ -1.39
HDAC1-202ENST00000428704 OR8A1Q8NGG7 326 aa6.34□□□□□ -1.39
HDAC1-202ENST00000428704 ODF3Q96PU9 254 aa6.34□□□□□ -1.39
HDAC1-202ENST00000428704 TMSB15BA0A087X1C1 80 aa6.33□□□□□ -1.4
HDAC1-202ENST00000428704 LINC01546A6NGU7 62 aa6.33□□□□□ -1.4
HDAC1-202ENST00000428704 M0R2Z0 102 aa6.33□□□□□ -1.4
HDAC1-202ENST00000428704 ZNF705DP0CH99 300 aaPredicted RBP6.33□□□□□ -1.4
HDAC1-202ENST00000428704 ZNF705BP0CI00 300 aaPredicted RBP6.33□□□□□ -1.4
HDAC1-202ENST00000428704 MRPL51Q4U2R6 128 aaKnown RBP6.33□□□□□ -1.4
HDAC1-202ENST00000428704 ORMDL3Q8N138 153 aa6.33□□□□□ -1.4
HDAC1-202ENST00000428704 C11orf21Q9P2W6 132 aa6.33□□□□□ -1.4
HDAC1-202ENST00000428704 TRAV2A0A0B4J234 112 aa6.32□□□□□ -1.4
HDAC1-202ENST00000428704 TRAV25A0A0B4J276 109 aa6.32□□□□□ -1.4
HDAC1-202ENST00000428704 A0A1B0GVY2 172 aa6.32□□□□□ -1.4
HDAC1-202ENST00000428704 KLLNB2CW77 178 aa6.32□□□□□ -1.4
HDAC1-202ENST00000428704 K7EQG2 157 aa6.32□□□□□ -1.4
HDAC1-202ENST00000428704 PRB4P10163 310 aaPredicted RBP6.32□□□□□ -1.4
HDAC1-202ENST00000428704 BTF3P20290 206 aaKnown RBP6.32□□□□□ -1.4
HDAC1-202ENST00000428704 KRTDAPP60985 99 aa6.32□□□□□ -1.4
HDAC1-202ENST00000428704 TWIST1Q15672 202 aa6.32□□□□□ -1.4
HDAC1-202ENST00000428704 EBLN2Q6P2I7 272 aa6.32□□□□□ -1.4
HDAC1-202ENST00000428704 RNASEKQ6P5S7 137 aaKnown RBP6.32□□□□□ -1.4
HDAC1-202ENST00000428704 AMN1Q8IY45 258 aa6.32□□□□□ -1.4
HDAC1-202ENST00000428704 RNF185Q96GF1 192 aa6.32□□□□□ -1.4
HDAC1-202ENST00000428704 PRELID3AQ96N28 172 aa6.32□□□□□ -1.4
HDAC1-202ENST00000428704 NDUFAF3Q9BU61 184 aa6.32□□□□□ -1.4
HDAC1-202ENST00000428704 TPPP3Q9BW30 176 aa6.32□□□□□ -1.4
HDAC1-202ENST00000428704 IGHV1-24A0A0C4DH33 117 aa6.31□□□□□ -1.4
HDAC1-202ENST00000428704 C20orf202A1L168 122 aa6.31□□□□□ -1.4
HDAC1-202ENST00000428704 OR11H12B2RN74 326 aa6.31□□□□□ -1.4
HDAC1-202ENST00000428704 LEPROTL1O95214 131 aa6.31□□□□□ -1.4
HDAC1-202ENST00000428704 ODF3L2Q3SX64 289 aa6.31□□□□□ -1.4
HDAC1-202ENST00000428704 LBHQ53QV2 105 aaPredicted RBP6.31□□□□□ -1.4
HDAC1-202ENST00000428704 SPATA12Q7Z6I5 190 aa6.31□□□□□ -1.4
HDAC1-202ENST00000428704 MRPL52Q86TS9 123 aaKnown RBP6.31□□□□□ -1.4
HDAC1-202ENST00000428704 PRSS3P2Q8NHM4 247 aa6.31□□□□□ -1.4
HDAC1-202ENST00000428704 TMEM70Q9BUB7 260 aa6.31□□□□□ -1.4
HDAC1-202ENST00000428704 PRO1933Q9H354 126 aa6.31□□□□□ -1.4
HDAC1-202ENST00000428704 SCRT2Q9NQ03 307 aa6.31□□□□□ -1.4
HDAC1-202ENST00000428704 HSPB8Q9UJY1 196 aa6.31□□□□□ -1.4
HDAC1-202ENST00000428704 PKD1P98161 4303 aa6.3□□□□□ -1.4
HDAC1-202ENST00000428704 D6R8Y8 96 aa6.3□□□□□ -1.4
HDAC1-202ENST00000428704 CKS2P33552 79 aa6.3□□□□□ -1.4
HDAC1-202ENST00000428704 SNRPD3P62318 126 aaKnown RBP6.3□□□□□ -1.4
HDAC1-202ENST00000428704 PRR9Q5T870 116 aa6.3□□□□□ -1.4
HDAC1-202ENST00000428704 PET117Q6UWS5 81 aa6.3□□□□□ -1.4
HDAC1-202ENST00000428704 C14orf144Q96I85 54 aa6.3□□□□□ -1.4
HDAC1-202ENST00000428704 SPAG8Q99932 426 aaPredicted RBP6.3□□□□□ -1.4
HDAC1-202ENST00000428704 VAMP8Q9BV40 100 aa6.3□□□□□ -1.4
HDAC1-202ENST00000428704 MS4A6AQ9H2W1 248 aa6.3□□□□□ -1.4
HDAC1-202ENST00000428704 A0A0J9YX75 114 aa6.29□□□□□ -1.4
HDAC1-202ENST00000428704 A8MTW9 85 aa6.29□□□□□ -1.4
HDAC1-202ENST00000428704 SYS1-DBNDD2H3BUS1 97 aa6.29□□□□□ -1.4
HDAC1-202ENST00000428704 DUSP14O95147 198 aaKnown RBP6.29□□□□□ -1.4
HDAC1-202ENST00000428704 LEPP41159 167 aa6.29□□□□□ -1.4
HDAC1-202ENST00000428704 KRTAP19-4Q3LI73 84 aa6.29□□□□□ -1.4
HDAC1-202ENST00000428704 TDRG1Q3Y452 100 aa6.29□□□□□ -1.4
HDAC1-202ENST00000428704 FA2HQ7L5A8 372 aa6.29□□□□□ -1.4
HDAC1-202ENST00000428704 SMIM15Q7Z3B0 74 aa6.29□□□□□ -1.4
HDAC1-202ENST00000428704 MAPKAPK5-AS1Q8N8E1 139 aa6.29□□□□□ -1.4
HDAC1-202ENST00000428704 OR10AG1Q8NH19 301 aa6.29□□□□□ -1.4
HDAC1-202ENST00000428704 MIEN1Q9BRT3 115 aa6.29□□□□□ -1.4
HDAC1-202ENST00000428704 MSRB1Q9NZV6 116 aa6.29□□□□□ -1.4
HDAC1-202ENST00000428704 NXPH4O95158 308 aa6.28□□□□□ -1.4
HDAC1-202ENST00000428704 IFI27P40305 119 aaPredicted RBP6.28□□□□□ -1.4
HDAC1-202ENST00000428704 ASIPP42127 132 aa6.28□□□□□ -1.4
HDAC1-202ENST00000428704 ANXA2RQ3ZCQ2 193 aa6.28□□□□□ -1.4
HDAC1-202ENST00000428704 POM121L12Q8N7R1 296 aa6.28□□□□□ -1.4
HDAC1-202ENST00000428704 MRAP2Q96G30 205 aa6.28□□□□□ -1.4
HDAC1-202ENST00000428704 MAP1LC3CQ9BXW4 147 aa6.28□□□□□ -1.4
HDAC1-202ENST00000428704 NXT2Q9NPJ8 142 aaKnown RBP6.28□□□□□ -1.4
HDAC1-202ENST00000428704 DMBT1Q9UGM3 2413 aaPredicted RBP6.28□□□□□ -1.4
HDAC1-202ENST00000428704 TRAV9-2A0A087WT02 112 aa6.27□□□□□ -1.41
HDAC1-202ENST00000428704 A0A096LNJ9 63 aa6.27□□□□□ -1.41
HDAC1-202ENST00000428704 OR4C46A6NHA9 309 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms