RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 CTSZQ9UBR2 303 aa6.95□□□□□ -1.3
CTNND1-208ENST00000428599 GAGE12HA6NDE8 117 aa6.95□□□□□ -1.3
CTNND1-208ENST00000428599 SPAG11BQ08648 103 aa6.95□□□□□ -1.3
CTNND1-208ENST00000428599 C17orf77Q96MU5 243 aa6.95□□□□□ -1.3
CTNND1-208ENST00000428599 PLA2G5P39877 138 aa6.95□□□□□ -1.3
CTNND1-208ENST00000428599 SPRNQ5BIV9 151 aa6.95□□□□□ -1.3
CTNND1-208ENST00000428599 IGFBPL1Q8WX77 278 aa6.95□□□□□ -1.3
CTNND1-208ENST00000428599 DKK2Q9UBU2 259 aa6.95□□□□□ -1.3
CTNND1-208ENST00000428599 TRBV7-3A0A075B6L6 115 aa6.94□□□□□ -1.3
CTNND1-208ENST00000428599 IGLC7A0M8Q6 106 aa6.94□□□□□ -1.3
CTNND1-208ENST00000428599 SPRY2O43597 315 aa6.94□□□□□ -1.3
CTNND1-208ENST00000428599 NRGNQ92686 78 aa6.94□□□□□ -1.3
CTNND1-208ENST00000428599 TMEM89A2RUT3 159 aa6.94□□□□□ -1.3
CTNND1-208ENST00000428599 PRB2P02812 416 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-208ENST00000428599 C12orf74Q32Q52 190 aa6.94□□□□□ -1.3
CTNND1-208ENST00000428599 HIGD2BQ4VC39 106 aa6.94□□□□□ -1.3
CTNND1-208ENST00000428599 CASC2Q6XLA1 102 aa6.94□□□□□ -1.3
CTNND1-208ENST00000428599 KLK12Q9UKR0 248 aa6.94□□□□□ -1.3
CTNND1-208ENST00000428599 C2orf70A6NJV1 201 aa6.94□□□□□ -1.3
CTNND1-208ENST00000428599 K7ERJ3 54 aa6.94□□□□□ -1.3
CTNND1-208ENST00000428599 BLCAPP62952 87 aa6.94□□□□□ -1.3
CTNND1-208ENST00000428599 DAZAP2Q15038 168 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-208ENST00000428599 Q6ZVH6 145 aa6.94□□□□□ -1.3
CTNND1-208ENST00000428599 GTSF1Q8WW33 167 aa6.94□□□□□ -1.3
CTNND1-208ENST00000428599 IGHV7-81A0A0B4J1V7 117 aa6.94□□□□□ -1.3
CTNND1-208ENST00000428599 WIPF3A6NGB9 483 aa6.94□□□□□ -1.3
CTNND1-208ENST00000428599 DEFB4AO15263 64 aa6.94□□□□□ -1.3
CTNND1-208ENST00000428599 ARFGEF3Q5TH69 2177 aa6.94□□□□□ -1.3
CTNND1-208ENST00000428599 LINC01620Q4KN68 170 aa6.93□□□□□ -1.3
CTNND1-208ENST00000428599 C16orf54Q6UWD8 224 aa6.93□□□□□ -1.3
CTNND1-208ENST00000428599 MED13LQ71F56 2210 aa6.93□□□□□ -1.3
CTNND1-208ENST00000428599 C11orf53Q8IXP5 236 aa6.93□□□□□ -1.3
CTNND1-208ENST00000428599 PSMB8P28062 276 aa6.93□□□□□ -1.3
CTNND1-208ENST00000428599 H3BMG7 143 aa6.93□□□□□ -1.3
CTNND1-208ENST00000428599 ZFP36P26651 326 aaKnown RBP6.93□□□□□ -1.3
CTNND1-208ENST00000428599 HILS1P60008 231 aa6.93□□□□□ -1.3
CTNND1-208ENST00000428599 FGF23Q9GZV9 251 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-208ENST00000428599 MALRD1Q5VYJ5 2156 aa6.93□□□□□ -1.3
CTNND1-208ENST00000428599 LRCOL1A6NCL2 159 aa6.92□□□□□ -1.3
CTNND1-208ENST00000428599 IGKV4-1P06312 121 aa6.92□□□□□ -1.3
CTNND1-208ENST00000428599 ZNF726P1Q15940 193 aa6.92□□□□□ -1.3
CTNND1-208ENST00000428599 PTPRQQ9UMZ3 2332 aa6.92□□□□□ -1.3
CTNND1-208ENST00000428599 K7EMT4 169 aa6.92□□□□□ -1.3
CTNND1-208ENST00000428599 K7EP13 123 aa6.92□□□□□ -1.3
CTNND1-208ENST00000428599 C5orf56Q8N8D9 126 aa6.92□□□□□ -1.3
CTNND1-208ENST00000428599 Q8NA96 180 aa6.92□□□□□ -1.3
CTNND1-208ENST00000428599 IGLL1P15814 213 aa6.92□□□□□ -1.3
CTNND1-208ENST00000428599 JMJD7-PLA2G4BH0Y9G9 81 aa6.92□□□□□ -1.3
CTNND1-208ENST00000428599 RPL39LQ96EH5 51 aaKnown RBP6.92□□□□□ -1.3
CTNND1-208ENST00000428599 A0A0B4J2C4 111 aa6.91□□□□□ -1.3
CTNND1-208ENST00000428599 IGKV2-24A0A0C4DH68 120 aa6.91□□□□□ -1.3
CTNND1-208ENST00000428599 WISP2O76076 250 aa6.91□□□□□ -1.3
CTNND1-208ENST00000428599 MUSTN1Q8IVN3 82 aa6.91□□□□□ -1.3
CTNND1-208ENST00000428599 NDUFA11Q86Y39 141 aa6.91□□□□□ -1.3
CTNND1-208ENST00000428599 PRO0255Q9UI72 69 aa6.91□□□□□ -1.3
CTNND1-208ENST00000428599 DENND4AQ7Z401 1863 aa6.91□□□□□ -1.3
CTNND1-208ENST00000428599 ABCA1O95477 2261 aa6.9□□□□□ -1.3
CTNND1-208ENST00000428599 IGLV11-55A0A075B6I3 123 aa6.9□□□□□ -1.3
CTNND1-208ENST00000428599 K7ERS5 55 aa6.9□□□□□ -1.3
CTNND1-208ENST00000428599 Q8N1Y9 231 aa6.9□□□□□ -1.3
CTNND1-208ENST00000428599 PRORYQ9H606 182 aa6.9□□□□□ -1.3
CTNND1-208ENST00000428599 MED13Q9UHV7 2174 aa6.9□□□□□ -1.3
CTNND1-208ENST00000428599 A0A0J9YXV3 536 aa6.9□□□□□ -1.31
CTNND1-208ENST00000428599 COX7BP24311 80 aa6.9□□□□□ -1.31
CTNND1-208ENST00000428599 SMIM20Q8N5G0 67 aa6.9□□□□□ -1.31
CTNND1-208ENST00000428599 DEFB125Q8N687 156 aa6.9□□□□□ -1.31
CTNND1-208ENST00000428599 C7orf33Q8WU49 177 aa6.9□□□□□ -1.31
CTNND1-208ENST00000428599 TMEM263Q8WUH6 116 aaKnown RBP6.9□□□□□ -1.31
CTNND1-208ENST00000428599 KIR2DL5BA0A0G2JN68 375 aa6.9□□□□□ -1.31
CTNND1-208ENST00000428599 KIR2DL5BA0A0G2JPC4 375 aa6.9□□□□□ -1.31
CTNND1-208ENST00000428599 I3L2K1 104 aa6.9□□□□□ -1.31
CTNND1-208ENST00000428599 TRBV12-3P01733 135 aa6.9□□□□□ -1.31
CTNND1-208ENST00000428599 KIR2DL5AQ8N109 375 aa6.9□□□□□ -1.31
CTNND1-208ENST00000428599 KIAA1549LQ6ZVL6 1849 aa6.89□□□□□ -1.31
CTNND1-208ENST00000428599 SPATA25Q9BR10 227 aa6.89□□□□□ -1.31
CTNND1-208ENST00000428599 SS18L2Q9UHA2 77 aa6.89□□□□□ -1.31
CTNND1-208ENST00000428599 ADCYAP1P18509 176 aa6.89□□□□□ -1.31
CTNND1-208ENST00000428599 KRTAP27-1Q3LI81 207 aa6.89□□□□□ -1.31
CTNND1-208ENST00000428599 TMEM61Q8N0U2 210 aa6.89□□□□□ -1.31
CTNND1-208ENST00000428599 TMEM131Q92545 1883 aa6.89□□□□□ -1.31
CTNND1-208ENST00000428599 DNAJC9-AS1A6NH13 148 aa6.89□□□□□ -1.31
CTNND1-208ENST00000428599 CCL25O15444 150 aa6.89□□□□□ -1.31
CTNND1-208ENST00000428599 ZNF747Q9BV97 191 aa6.89□□□□□ -1.31
CTNND1-208ENST00000428599 CTSGP08311 255 aa6.88□□□□□ -1.31
CTNND1-208ENST00000428599 GATA1P15976 413 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-208ENST00000428599 ASPHD1Q5U4P2 390 aa6.88□□□□□ -1.31
CTNND1-208ENST00000428599 UBE2D1P51668 147 aa6.88□□□□□ -1.31
CTNND1-208ENST00000428599 Q8N9W7 124 aa6.88□□□□□ -1.31
CTNND1-208ENST00000428599 CUL9Q8IWT3 2517 aa6.88□□□□□ -1.31
CTNND1-208ENST00000428599 IGKV3D-7A0A0C4DH55 119 aa6.88□□□□□ -1.31
CTNND1-208ENST00000428599 ATOX1O00244 68 aa6.88□□□□□ -1.31
CTNND1-208ENST00000428599 PDE6GP18545 87 aa6.88□□□□□ -1.31
CTNND1-208ENST00000428599 HIGD2AQ9BW72 106 aa6.88□□□□□ -1.31
CTNND1-208ENST00000428599 A0A087WZ39 114 aa6.88□□□□□ -1.31
CTNND1-208ENST00000428599 K7EIM0 57 aa6.88□□□□□ -1.31
CTNND1-208ENST00000428599 TMEM256-PLSCR3K7ERE1 68 aa6.88□□□□□ -1.31
CTNND1-208ENST00000428599 LRRC75A-AS1Q8N1F1 130 aa6.88□□□□□ -1.31
CTNND1-208ENST00000428599 NOTCH3Q9UM47 2321 aa6.87□□□□□ -1.31
CTNND1-208ENST00000428599 MED14OSP0DP75 135 aa6.87□□□□□ -1.31
CTNND1-208ENST00000428599 LECT2O14960 151 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms