RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 TIRAPP58753 221 aa6.42□□□□□ -1.38
TRIM39-208ENST00000428555 RHOHQ15669 191 aa6.42□□□□□ -1.38
TRIM39-208ENST00000428555 PIK3CD-AS1Q5SR53 167 aa6.42□□□□□ -1.38
TRIM39-208ENST00000428555 DNLZQ5SXM8 178 aa6.42□□□□□ -1.38
TRIM39-208ENST00000428555 ZFP2Q6ZN57 461 aa6.42□□□□□ -1.38
TRIM39-208ENST00000428555 BAGE2Q86Y30 109 aa6.42□□□□□ -1.38
TRIM39-208ENST00000428555 KRTAP17-1Q9BYP8 105 aa6.42□□□□□ -1.38
TRIM39-208ENST00000428555 PARLQ9H300 379 aa6.42□□□□□ -1.38
TRIM39-208ENST00000428555 APOBP04114 4563 aaKnown RBP6.42□□□□□ -1.38
TRIM39-208ENST00000428555 GAGE12JA6NER3 117 aa6.41□□□□□ -1.38
TRIM39-208ENST00000428555 CRYGDP07320 174 aa6.41□□□□□ -1.38
TRIM39-208ENST00000428555 MGST1P10620 155 aaKnown RBP6.41□□□□□ -1.38
TRIM39-208ENST00000428555 GAGE1Q13065 139 aa6.41□□□□□ -1.38
TRIM39-208ENST00000428555 GAGE4Q13068 117 aa6.41□□□□□ -1.38
TRIM39-208ENST00000428555 GAGE5Q13069 117 aa6.41□□□□□ -1.38
TRIM39-208ENST00000428555 GAGE13Q4V321 117 aa6.41□□□□□ -1.38
TRIM39-208ENST00000428555 CT83Q5H943 113 aa6.41□□□□□ -1.38
TRIM39-208ENST00000428555 UFSP1Q6NVU6 142 aa6.41□□□□□ -1.38
TRIM39-208ENST00000428555 Q6ZNX1 250 aa6.41□□□□□ -1.38
TRIM39-208ENST00000428555 TCTE3Q8IZS6 198 aa6.41□□□□□ -1.38
TRIM39-208ENST00000428555 ATP6V0E2Q8NHE4 81 aa6.41□□□□□ -1.38
TRIM39-208ENST00000428555 SCRT2Q9NQ03 307 aa6.41□□□□□ -1.38
TRIM39-208ENST00000428555 TRAV1-1A0A0B4J248 108 aa6.4□□□□□ -1.38
TRIM39-208ENST00000428555 IGHV3-38A0A0C4DH36 116 aa6.4□□□□□ -1.38
TRIM39-208ENST00000428555 K7EP13 123 aa6.4□□□□□ -1.38
TRIM39-208ENST00000428555 M0R381 172 aa6.4□□□□□ -1.38
TRIM39-208ENST00000428555 RPL19P84098 196 aaKnown RBP6.4□□□□□ -1.38
TRIM39-208ENST00000428555 OR10J3Q5JRS4 329 aa6.4□□□□□ -1.38
TRIM39-208ENST00000428555 NFE4Q86UQ8 179 aa6.4□□□□□ -1.38
TRIM39-208ENST00000428555 C14orf178Q8N769 122 aaPredicted RBP6.4□□□□□ -1.38
TRIM39-208ENST00000428555 SYT8Q8NBV8 401 aa6.4□□□□□ -1.38
TRIM39-208ENST00000428555 MLST8Q9BVC4 326 aa6.4□□□□□ -1.38
TRIM39-208ENST00000428555 GTSF1LQ9H1H1 148 aa6.4□□□□□ -1.38
TRIM39-208ENST00000428555 MSRB1Q9NZV6 116 aa6.4□□□□□ -1.38
TRIM39-208ENST00000428555 GNG13Q9P2W3 67 aa6.4□□□□□ -1.38
TRIM39-208ENST00000428555 PHLDA3Q9Y5J5 127 aa6.4□□□□□ -1.38
TRIM39-208ENST00000428555 A0A087WWL8 130 aa6.39□□□□□ -1.39
TRIM39-208ENST00000428555 TRAV8-6A0A0B4J262 113 aa6.39□□□□□ -1.39
TRIM39-208ENST00000428555 FUSP35637 526 aaKnown RBP eCLIP6.39□□□□□ -1.39
TRIM39-208ENST00000428555 RPL35P42766 123 aaKnown RBP6.39□□□□□ -1.39
TRIM39-208ENST00000428555 RAB5CP51148 216 aa6.39□□□□□ -1.39
TRIM39-208ENST00000428555 LELP1Q5T871 98 aa6.39□□□□□ -1.39
TRIM39-208ENST00000428555 FAM74A4Q5TZK3 123 aa6.39□□□□□ -1.39
TRIM39-208ENST00000428555 EIF5AL1Q6IS14 154 aaKnown RBP6.39□□□□□ -1.39
TRIM39-208ENST00000428555 AKAP14Q86UN6 197 aa6.39□□□□□ -1.39
TRIM39-208ENST00000428555 SFRP2Q96HF1 295 aa6.39□□□□□ -1.39
TRIM39-208ENST00000428555 ABCA13Q86UQ4 5058 aa6.39□□□□□ -1.39
TRIM39-208ENST00000428555 IGHV3-30P01768 117 aa6.38□□□□□ -1.39
TRIM39-208ENST00000428555 IGHV3-33P01772 117 aa6.38□□□□□ -1.39
TRIM39-208ENST00000428555 C1QBP02746 253 aa6.38□□□□□ -1.39
TRIM39-208ENST00000428555 IGHV3-30-3P0DP02 117 aa6.38□□□□□ -1.39
TRIM39-208ENST00000428555 IGHV3-30-5P0DP03 117 aa6.38□□□□□ -1.39
TRIM39-208ENST00000428555 SULT1A2P50226 295 aa6.38□□□□□ -1.39
TRIM39-208ENST00000428555 LINC01556Q5JQF7 62 aa6.38□□□□□ -1.39
TRIM39-208ENST00000428555 PRR27Q6MZM9 219 aa6.38□□□□□ -1.39
TRIM39-208ENST00000428555 DERL1Q9BUN8 251 aa6.38□□□□□ -1.39
TRIM39-208ENST00000428555 MANBALQ9NQG1 85 aa6.38□□□□□ -1.39
TRIM39-208ENST00000428555 A0A087WTM6 91 aa6.37□□□□□ -1.39
TRIM39-208ENST00000428555 MUC21A0A0G2JKD1 596 aa6.37□□□□□ -1.39
TRIM39-208ENST00000428555 MUC21A0A140T8X8 626 aa6.37□□□□□ -1.39
TRIM39-208ENST00000428555 RAB19A4D1S5 217 aa6.37□□□□□ -1.39
TRIM39-208ENST00000428555 IBA57-AS1B1ANH7 110 aa6.37□□□□□ -1.39
TRIM39-208ENST00000428555 F8WDY8 70 aa6.37□□□□□ -1.39
TRIM39-208ENST00000428555 TEX46H3BTG2 121 aa6.37□□□□□ -1.39
TRIM39-208ENST00000428555 RHODO00212 210 aa6.37□□□□□ -1.39
TRIM39-208ENST00000428555 ERVFC1-1P60608 527 aa6.37□□□□□ -1.39
TRIM39-208ENST00000428555 SLC51BQ86UW2 128 aa6.37□□□□□ -1.39
TRIM39-208ENST00000428555 ZFP82Q8N141 532 aa6.37□□□□□ -1.39
TRIM39-208ENST00000428555 C10orf126Q8N4M7 172 aa6.37□□□□□ -1.39
TRIM39-208ENST00000428555 OR10AG1Q8NH19 301 aa6.37□□□□□ -1.39
TRIM39-208ENST00000428555 CDK2AP2O75956 126 aa6.36□□□□□ -1.39
TRIM39-208ENST00000428555 LINC00694P0DN24 101 aa6.36□□□□□ -1.39
TRIM39-208ENST00000428555 S100A12P80511 92 aa6.36□□□□□ -1.39
TRIM39-208ENST00000428555 Q8N3U1 123 aa6.36□□□□□ -1.39
TRIM39-208ENST00000428555 C11orf52Q96A22 123 aa6.36□□□□□ -1.39
TRIM39-208ENST00000428555 SSBP4Q9BWG4 385 aaPredicted RBP6.36□□□□□ -1.39
TRIM39-208ENST00000428555 KRTAP4-5Q9BYR2 181 aa6.36□□□□□ -1.39
TRIM39-208ENST00000428555 VCX2Q9H322 139 aa6.36□□□□□ -1.39
TRIM39-208ENST00000428555 Q9HAA7 133 aa6.36□□□□□ -1.39
TRIM39-208ENST00000428555 IGLV2-8P01709 118 aa6.35□□□□□ -1.39
TRIM39-208ENST00000428555 CXCL1P09341 107 aa6.35□□□□□ -1.39
TRIM39-208ENST00000428555 CENPWQ5EE01 88 aa6.35□□□□□ -1.39
TRIM39-208ENST00000428555 C9orf62Q8N4C0 152 aa6.35□□□□□ -1.39
TRIM39-208ENST00000428555 MED9Q9NWA0 146 aa6.35□□□□□ -1.39
TRIM39-208ENST00000428555 FAT1Q14517 4588 aa6.34□□□□□ -1.39
TRIM39-208ENST00000428555 A0A087WWC5 75 aa6.34□□□□□ -1.39
TRIM39-208ENST00000428555 SNAI2O43623 268 aa6.34□□□□□ -1.39
TRIM39-208ENST00000428555 PSCAO43653 123 aa6.34□□□□□ -1.39
TRIM39-208ENST00000428555 OR5AL1P0C617 328 aa6.34□□□□□ -1.39
TRIM39-208ENST00000428555 GZMBP10144 247 aa6.34□□□□□ -1.39
TRIM39-208ENST00000428555 RAB14P61106 215 aa6.34□□□□□ -1.39
TRIM39-208ENST00000428555 MEF2BQ02080 365 aaPredicted RBP6.34□□□□□ -1.39
TRIM39-208ENST00000428555 SPANXN1Q5VSR9 72 aa6.34□□□□□ -1.39
TRIM39-208ENST00000428555 DAZ4Q86SG3 579 aaKnown RBP6.34□□□□□ -1.39
TRIM39-208ENST00000428555 DAZAP1Q96EP5 407 aaKnown RBP6.34□□□□□ -1.39
TRIM39-208ENST00000428555 DAZ3Q9NR90 486 aaKnown RBP6.34□□□□□ -1.39
TRIM39-208ENST00000428555 TRBV10-1A0A0K0K1A3 114 aa6.33□□□□□ -1.4
TRIM39-208ENST00000428555 LRCOL1A6NCL2 159 aa6.33□□□□□ -1.4
TRIM39-208ENST00000428555 RBFOX3A6NFN3 312 aa6.33□□□□□ -1.4
TRIM39-208ENST00000428555 PDE6DO43924 150 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms