RNA–Protein interactions for RNA: ENST00000427741.5

CNTN4-206, Transcript of contactin 4, humanhuman

TSL 2

Gene CNTN4, Length 3,057 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-206ENST00000427741 PTPRZ1P23471 2315 aaPredicted RBP11.21□□□□□ -0.61
CNTN4-206ENST00000427741 HERVK_113P61574 105 aa11.21□□□□□ -0.62
CNTN4-206ENST00000427741 LYRM7Q5U5X0 104 aa11.21□□□□□ -0.62
CNTN4-206ENST00000427741 TEX29Q8N6K0 151 aa11.21□□□□□ -0.62
CNTN4-206ENST00000427741 MUC4Q99102 2169 aa11.21□□□□□ -0.62
CNTN4-206ENST00000427741 AMELXQ99217 191 aa11.21□□□□□ -0.62
CNTN4-206ENST00000427741 IGHV3-64A0A075B6Q5 118 aa11.2□□□□□ -0.62
CNTN4-206ENST00000427741 NXPH4O95158 308 aa11.2□□□□□ -0.62
CNTN4-206ENST00000427741 ZNRF2Q8NHG8 242 aa11.2□□□□□ -0.62
CNTN4-206ENST00000427741 IGHV4OR15-8A0A075B7B6 117 aa11.2□□□□□ -0.62
CNTN4-206ENST00000427741 A0A087WW49 117 aa11.2□□□□□ -0.62
CNTN4-206ENST00000427741 POLR2KP53803 58 aaKnown RBP11.2□□□□□ -0.62
CNTN4-206ENST00000427741 PAPPA-AS1Q5QFB9 102 aa11.2□□□□□ -0.62
CNTN4-206ENST00000427741 APRG1Q8IVJ8 170 aa11.2□□□□□ -0.62
CNTN4-206ENST00000427741 C10orf126Q8N4M7 172 aa11.2□□□□□ -0.62
CNTN4-206ENST00000427741 JPT2Q9H910 190 aa11.2□□□□□ -0.62
CNTN4-206ENST00000427741 TMEM219Q86XT9 240 aa11.2□□□□□ -0.62
CNTN4-206ENST00000427741 CCL21O00585 134 aa11.19□□□□□ -0.62
CNTN4-206ENST00000427741 CRLF1O75462 422 aa11.19□□□□□ -0.62
CNTN4-206ENST00000427741 RPL32P62910 135 aaKnown RBP11.19□□□□□ -0.62
CNTN4-206ENST00000427741 C19orf54Q5BKX5 351 aa11.19□□□□□ -0.62
CNTN4-206ENST00000427741 BEX4Q9NWD9 120 aaPredicted RBP11.19□□□□□ -0.62
CNTN4-206ENST00000427741 TRAV41A0A0B4J266 112 aa11.18□□□□□ -0.62
CNTN4-206ENST00000427741 SLC25A20O43772 301 aa11.18□□□□□ -0.62
CNTN4-206ENST00000427741 CEP295Q9C0D2 2601 aa11.18□□□□□ -0.62
CNTN4-206ENST00000427741 FAM223BA6NKX1 122 aa11.18□□□□□ -0.62
CNTN4-206ENST00000427741 SUMO4Q6EEV6 95 aa11.18□□□□□ -0.62
CNTN4-206ENST00000427741 FAM223AQ8IWN6 122 aa11.18□□□□□ -0.62
CNTN4-206ENST00000427741 TMEM141Q96I45 108 aa11.18□□□□□ -0.62
CNTN4-206ENST00000427741 COL6A6A6NMZ7 2263 aa11.18□□□□□ -0.62
CNTN4-206ENST00000427741 TRAV4A0A0B4J268 109 aa11.17□□□□□ -0.62
CNTN4-206ENST00000427741 NHLRC4P0CG21 123 aaPredicted RBP11.17□□□□□ -0.62
CNTN4-206ENST00000427741 PRO1854Q9UHT4 67 aa11.17□□□□□ -0.62
CNTN4-206ENST00000427741 EIF4EBP3O60516 100 aaPredicted RBP11.17□□□□□ -0.62
CNTN4-206ENST00000427741 ELANEP08246 267 aa11.17□□□□□ -0.62
CNTN4-206ENST00000427741 ZNF876PQ49A33 203 aa11.17□□□□□ -0.62
CNTN4-206ENST00000427741 TIMM17AQ99595 171 aa11.17□□□□□ -0.62
CNTN4-206ENST00000427741 OPRPNQ99935 248 aaPredicted RBP11.17□□□□□ -0.62
CNTN4-206ENST00000427741 GAGE5Q13069 117 aa11.17□□□□□ -0.62
CNTN4-206ENST00000427741 GAGE6Q13070 117 aa11.17□□□□□ -0.62
CNTN4-206ENST00000427741 COL12A1Q99715 3063 aa11.16□□□□□ -0.62
CNTN4-206ENST00000427741 A4D1N5 150 aa11.16□□□□□ -0.62
CNTN4-206ENST00000427741 RPL11P62913 178 aaKnown RBP11.16□□□□□ -0.62
CNTN4-206ENST00000427741 A0A087WWL8 130 aa11.16□□□□□ -0.62
CNTN4-206ENST00000427741 TRAV2A0A0B4J234 112 aa11.16□□□□□ -0.62
CNTN4-206ENST00000427741 J3QQQ9 107 aa11.16□□□□□ -0.62
CNTN4-206ENST00000427741 VCYO14598 125 aa11.16□□□□□ -0.62
CNTN4-206ENST00000427741 NPFFO15130 113 aa11.16□□□□□ -0.62
CNTN4-206ENST00000427741 IGHV4-39P01824 125 aa11.16□□□□□ -0.62
CNTN4-206ENST00000427741 ADORA2A-AS1P86434 159 aa11.16□□□□□ -0.62
CNTN4-206ENST00000427741 NTN5Q8WTR8 489 aaPredicted RBP11.16□□□□□ -0.62
CNTN4-206ENST00000427741 SPTAN1Q13813 2472 aaKnown RBP11.15□□□□□ -0.62
CNTN4-206ENST00000427741 NDUFA4O00483 81 aa11.15□□□□□ -0.62
CNTN4-206ENST00000427741 VCX2Q9H322 139 aa11.15□□□□□ -0.62
CNTN4-206ENST00000427741 A0A1W2PPR1 153 aa11.15□□□□□ -0.62
CNTN4-206ENST00000427741 SDHAF1A6NFY7 115 aa11.15□□□□□ -0.62
CNTN4-206ENST00000427741 CCDC179H3BU77 68 aa11.15□□□□□ -0.62
CNTN4-206ENST00000427741 Q1RN00 199 aa11.15□□□□□ -0.63
CNTN4-206ENST00000427741 MAP1AP78559 2803 aaPredicted RBP11.14□□□□□ -0.63
CNTN4-206ENST00000427741 TRBV7-9A0A0J9YWB2 115 aa11.14□□□□□ -0.63
CNTN4-206ENST00000427741 F5H697 171 aa11.14□□□□□ -0.63
CNTN4-206ENST00000427741 CITED1Q99966 193 aa11.14□□□□□ -0.63
CNTN4-206ENST00000427741 TRBV27A0A0K0K1C4 114 aa11.13□□□□□ -0.63
CNTN4-206ENST00000427741 GAGE2BQ13066 116 aa11.13□□□□□ -0.63
CNTN4-206ENST00000427741 GAGE2EQ4V326 116 aa11.13□□□□□ -0.63
CNTN4-206ENST00000427741 GAGE2DQ9UEU5 116 aa11.13□□□□□ -0.63
CNTN4-206ENST00000427741 VPS13CQ709C8 3753 aa11.13□□□□□ -0.63
CNTN4-206ENST00000427741 TEX49A0A1B0GTD5 131 aa11.13□□□□□ -0.63
CNTN4-206ENST00000427741 KLLNB2CW77 178 aa11.13□□□□□ -0.63
CNTN4-206ENST00000427741 LGALS3P17931 250 aaKnown RBP11.13□□□□□ -0.63
CNTN4-206ENST00000427741 ZNF580Q9UK33 172 aa11.13□□□□□ -0.63
CNTN4-206ENST00000427741 MOB4Q9Y3A3 225 aa11.13□□□□□ -0.63
CNTN4-206ENST00000427741 SNCGO76070 127 aa11.12□□□□□ -0.63
CNTN4-206ENST00000427741 IGHV3-33P01772 117 aa11.12□□□□□ -0.63
CNTN4-206ENST00000427741 TCF15Q12870 199 aa11.12□□□□□ -0.63
CNTN4-206ENST00000427741 ZNF256Q9Y2P7 627 aaPredicted RBP11.12□□□□□ -0.63
CNTN4-206ENST00000427741 ADARB2-AS1A8MUL3 147 aa11.12□□□□□ -0.63
CNTN4-206ENST00000427741 K7ENP7 123 aa11.12□□□□□ -0.63
CNTN4-206ENST00000427741 IGHV3-11P01762 117 aa11.12□□□□□ -0.63
CNTN4-206ENST00000427741 LMO4P61968 165 aa11.12□□□□□ -0.63
CNTN4-206ENST00000427741 TMEM263Q8WUH6 116 aaKnown RBP11.12□□□□□ -0.63
CNTN4-206ENST00000427741 FAM74A4Q5TZK3 123 aa11.12□□□□□ -0.63
CNTN4-206ENST00000427741 FAM159AQ6UWV7 190 aa11.12□□□□□ -0.63
CNTN4-206ENST00000427741 TMEM262E9PQX1 116 aa11.11□□□□□ -0.63
CNTN4-206ENST00000427741 SRD5A1P18405 259 aa11.11□□□□□ -0.63
CNTN4-206ENST00000427741 Q8N1Y9 231 aa11.11□□□□□ -0.63
CNTN4-206ENST00000427741 SORL1Q92673 2214 aa11.11□□□□□ -0.63
CNTN4-206ENST00000427741 IGHV3OR16-10A0A075B7F0 116 aa11.11□□□□□ -0.63
CNTN4-206ENST00000427741 TMEM223A0PJW6 202 aa11.11□□□□□ -0.63
CNTN4-206ENST00000427741 NDUFV3P56181 108 aaKnown RBP11.11□□□□□ -0.63
CNTN4-206ENST00000427741 MUSTN1Q8IVN3 82 aa11.11□□□□□ -0.63
CNTN4-206ENST00000427741 RHPN1-AS1Q9BWJ2 59 aa11.11□□□□□ -0.63
CNTN4-206ENST00000427741 TRBV6-5A0A0K0K1A5 114 aa11.1□□□□□ -0.63
CNTN4-206ENST00000427741 LGALS9O00182 355 aa11.1□□□□□ -0.63
CNTN4-206ENST00000427741 PTPRQQ9UMZ3 2332 aa11.1□□□□□ -0.63
CNTN4-206ENST00000427741 RHODO00212 210 aa11.1□□□□□ -0.63
CNTN4-206ENST00000427741 LEPROTO15243 131 aa11.1□□□□□ -0.63
CNTN4-206ENST00000427741 TTC32Q5I0X7 151 aa11.1□□□□□ -0.63
CNTN4-206ENST00000427741 M0QXV9 152 aa11.09□□□□□ -0.63
CNTN4-206ENST00000427741 BPESC1Q9GZL8 116 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms