RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 TMEM88Q6PEY1 159 aa5.18□□□□□ -1.58
LINC01049-201ENST00000426840 FAM231DQ6ZW35 169 aa5.18□□□□□ -1.58
LINC01049-201ENST00000426840 LINC01551Q86U37 167 aa5.18□□□□□ -1.58
LINC01049-201ENST00000426840 VSIG2Q96IQ7 327 aa5.18□□□□□ -1.58
LINC01049-201ENST00000426840 NDUFAF3Q9BU61 184 aa5.18□□□□□ -1.58
LINC01049-201ENST00000426840 C1orf43Q9BWL3 253 aa5.18□□□□□ -1.58
LINC01049-201ENST00000426840 RNASE7Q9H1E1 156 aaKnown RBP5.18□□□□□ -1.58
LINC01049-201ENST00000426840 JPT2Q9H910 190 aa5.18□□□□□ -1.58
LINC01049-201ENST00000426840 TRAV4A0A0B4J268 109 aa5.17□□□□□ -1.58
LINC01049-201ENST00000426840 OR5AL1P0C617 328 aa5.17□□□□□ -1.58
LINC01049-201ENST00000426840 RPL23P62829 140 aaKnown RBP5.17□□□□□ -1.58
LINC01049-201ENST00000426840 SOHLH1Q5JUK2 328 aa5.17□□□□□ -1.58
LINC01049-201ENST00000426840 CFAP126Q5VTH2 177 aa5.17□□□□□ -1.58
LINC01049-201ENST00000426840 OR4C5Q8NGB2 326 aa5.17□□□□□ -1.58
LINC01049-201ENST00000426840 NAT8Q9UHE5 227 aa5.17□□□□□ -1.58
LINC01049-201ENST00000426840 SACSQ9NZJ4 4579 aa5.16□□□□□ -1.58
LINC01049-201ENST00000426840 TRAV26-1A0A087WT03 109 aa5.16□□□□□ -1.58
LINC01049-201ENST00000426840 MUC21A0A0G2JKD1 596 aa5.16□□□□□ -1.58
LINC01049-201ENST00000426840 A0A0J9YY99 117 aa5.16□□□□□ -1.58
LINC01049-201ENST00000426840 MUC21A0A140T8X8 626 aa5.16□□□□□ -1.58
LINC01049-201ENST00000426840 LINC00862A6NCI5 91 aa5.16□□□□□ -1.58
LINC01049-201ENST00000426840 H3BNG1 76 aa5.16□□□□□ -1.58
LINC01049-201ENST00000426840 GATCO43716 136 aaKnown RBP5.16□□□□□ -1.58
LINC01049-201ENST00000426840 CIDEAO60543 219 aa5.16□□□□□ -1.58
LINC01049-201ENST00000426840 CRYGDP07320 174 aa5.16□□□□□ -1.58
LINC01049-201ENST00000426840 CRYBA4P53673 196 aa5.16□□□□□ -1.58
LINC01049-201ENST00000426840 SLAQ13239 276 aa5.16□□□□□ -1.58
LINC01049-201ENST00000426840 UFSP1Q6NVU6 142 aa5.16□□□□□ -1.58
LINC01049-201ENST00000426840 OR10AG1Q8NH19 301 aa5.16□□□□□ -1.58
LINC01049-201ENST00000426840 ISOC2Q96AB3 205 aa5.16□□□□□ -1.58
LINC01049-201ENST00000426840 SFRP2Q96HF1 295 aa5.16□□□□□ -1.58
LINC01049-201ENST00000426840 SAMD10Q9BYL1 202 aa5.16□□□□□ -1.58
LINC01049-201ENST00000426840 RPP21Q9H633 154 aaKnown RBP5.16□□□□□ -1.58
LINC01049-201ENST00000426840 OSTCQ9NRP0 149 aa5.16□□□□□ -1.58
LINC01049-201ENST00000426840 PRO0255Q9UI72 69 aa5.16□□□□□ -1.58
LINC01049-201ENST00000426840 HHLA3Q9XRX5 114 aa5.16□□□□□ -1.58
LINC01049-201ENST00000426840 PHLDA3Q9Y5J5 127 aa5.16□□□□□ -1.58
LINC01049-201ENST00000426840 DNAH1Q9P2D7 4330 aa5.16□□□□□ -1.58
LINC01049-201ENST00000426840 KMT2CQ8NEZ4 4911 aaKnown RBP5.16□□□□□ -1.58
LINC01049-201ENST00000426840 TENM2Q9NT68 2774 aa5.15□□□□□ -1.58
LINC01049-201ENST00000426840 IGHV3-73A0A0B4J1V6 119 aa5.15□□□□□ -1.59
LINC01049-201ENST00000426840 TRGV4A0A0C4DH28 118 aa5.15□□□□□ -1.59
LINC01049-201ENST00000426840 LCE6AA0A183 80 aa5.15□□□□□ -1.59
LINC01049-201ENST00000426840 XKRY2A2RUG3 117 aa5.15□□□□□ -1.59
LINC01049-201ENST00000426840 A8MWV9 139 aa5.15□□□□□ -1.59
LINC01049-201ENST00000426840 M0R381 172 aa5.15□□□□□ -1.59
LINC01049-201ENST00000426840 NXPH4O95158 308 aa5.15□□□□□ -1.59
LINC01049-201ENST00000426840 GATA1P15976 413 aaPredicted RBP5.15□□□□□ -1.59
LINC01049-201ENST00000426840 FOXA3P55318 350 aaPredicted RBP5.15□□□□□ -1.59
LINC01049-201ENST00000426840 ERVFC1-1P60608 527 aa5.15□□□□□ -1.59
LINC01049-201ENST00000426840 LGALS9CQ6DKI2 356 aa5.15□□□□□ -1.59
LINC01049-201ENST00000426840 WDR73Q6P4I2 378 aa5.15□□□□□ -1.59
LINC01049-201ENST00000426840 UQCC3Q6UW78 93 aa5.15□□□□□ -1.59
LINC01049-201ENST00000426840 LYZL1Q6UWQ5 148 aa5.15□□□□□ -1.59
LINC01049-201ENST00000426840 ZFP2Q6ZN57 461 aa5.15□□□□□ -1.59
LINC01049-201ENST00000426840 ZFP82Q8N141 532 aa5.15□□□□□ -1.59
LINC01049-201ENST00000426840 FER1L6-AS1Q8NA97 138 aa5.15□□□□□ -1.59
LINC01049-201ENST00000426840 C15orf53Q8NAA6 179 aa5.15□□□□□ -1.59
LINC01049-201ENST00000426840 GTSF1Q8WW33 167 aa5.15□□□□□ -1.59
LINC01049-201ENST00000426840 MSRB1Q9NZV6 116 aa5.15□□□□□ -1.59
LINC01049-201ENST00000426840 V9GYV3 84 aa5.15□□□□□ -1.59
LINC01049-201ENST00000426840 VPS13DQ5THJ4 4388 aa5.15□□□□□ -1.59
LINC01049-201ENST00000426840 RYR2Q92736 4967 aa5.14□□□□□ -1.59
LINC01049-201ENST00000426840 A0A096LPF7 62 aa5.14□□□□□ -1.59
LINC01049-201ENST00000426840 A0A1W2PPQ1 181 aa5.14□□□□□ -1.59
LINC01049-201ENST00000426840 TMEM218A2RU14 115 aa5.14□□□□□ -1.59
LINC01049-201ENST00000426840 A8MWL6 223 aa5.14□□□□□ -1.59
LINC01049-201ENST00000426840 F2Z2F3 143 aa5.14□□□□□ -1.59
LINC01049-201ENST00000426840 NUDT3O95989 172 aa5.14□□□□□ -1.59
LINC01049-201ENST00000426840 LINC00315P59091 139 aa5.14□□□□□ -1.59
LINC01049-201ENST00000426840 SSTP61278 116 aa5.14□□□□□ -1.59
LINC01049-201ENST00000426840 ADIRFQ15847 76 aa5.14□□□□□ -1.59
LINC01049-201ENST00000426840 SPANXN1Q5VSR9 72 aa5.14□□□□□ -1.59
LINC01049-201ENST00000426840 COMMD7Q86VX2 200 aa5.14□□□□□ -1.59
LINC01049-201ENST00000426840 OR10G8Q8NGN5 311 aa5.14□□□□□ -1.59
LINC01049-201ENST00000426840 LINC00476Q8WZB0 136 aa5.14□□□□□ -1.59
LINC01049-201ENST00000426840 KIF25-AS1Q9Y6Z4 181 aa5.14□□□□□ -1.59
LINC01049-201ENST00000426840 HYDINQ4G0P3 5121 aa5.14□□□□□ -1.59
LINC01049-201ENST00000426840 ALMS1Q8TCU4 4167 aa5.14□□□□□ -1.59
LINC01049-201ENST00000426840 A0A087WWL8 130 aa5.13□□□□□ -1.59
LINC01049-201ENST00000426840 LOC100131303A0A0U1RQF7 123 aa5.13□□□□□ -1.59
LINC01049-201ENST00000426840 TRBV6-4A0A1B0GX49 114 aa5.13□□□□□ -1.59
LINC01049-201ENST00000426840 ADCYAP1P18509 176 aa5.13□□□□□ -1.59
LINC01049-201ENST00000426840 NTF3P20783 257 aa5.13□□□□□ -1.59
LINC01049-201ENST00000426840 CTRLP40313 264 aa5.13□□□□□ -1.59
LINC01049-201ENST00000426840 CACNG7P62955 275 aa5.13□□□□□ -1.59
LINC01049-201ENST00000426840 C15orf54Q8N8G6 183 aa5.13□□□□□ -1.59
LINC01049-201ENST00000426840 SLC25A29Q8N8R3 303 aa5.13□□□□□ -1.59
LINC01049-201ENST00000426840 TSKUQ8WUA8 353 aa5.13□□□□□ -1.59
LINC01049-201ENST00000426840 TPPP3Q9BW30 176 aa5.13□□□□□ -1.59
LINC01049-201ENST00000426840 CNFNQ9BYD5 112 aa5.13□□□□□ -1.59
LINC01049-201ENST00000426840 Q9UF83 564 aa5.13□□□□□ -1.59
LINC01049-201ENST00000426840 FAM231BA6NCW3 169 aa5.12□□□□□ -1.59
LINC01049-201ENST00000426840 B5MCH6 92 aa5.12□□□□□ -1.59
LINC01049-201ENST00000426840 LY6G6CO95867 125 aa5.12□□□□□ -1.59
LINC01049-201ENST00000426840 P0DMU3 169 aa5.12□□□□□ -1.59
LINC01049-201ENST00000426840 FAM231AP0DMU4 169 aa5.12□□□□□ -1.59
LINC01049-201ENST00000426840 FAM231CP0DMU5 169 aa5.12□□□□□ -1.59
LINC01049-201ENST00000426840 MRPL23Q16540 153 aaKnown RBP5.12□□□□□ -1.59
LINC01049-201ENST00000426840 ESRGQ1W209 222 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms